Index: qipapers.bib
===================================================================
--- qipapers.bib	(revision 67)
+++ qipapers.bib	(revision 68)
@@ -3106,3 +3106,9563 @@
   author = {Tang, Chi-Keung and Medioni, G. and Lee, Mi-Suen},
   title = {N-dimensional tensor voting and application to epipolar geometry estimation},
-  journal = {I
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {8},
+  pages = {829 -844}
+}
+@article{Park1996,
+  author = {Park, K.-R. and Lee, C.-N.},
+  title = {Scale-Space Using Mathematical Morphology},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1996},
+  volume = {18},
+  number = {11},
+  pages = {1121--1126}
+}
+@book{Haykin1999,
+  author = {Haykin, S.},
+  title = {Neural Networks, a comprehensive foundation},
+  year = {1999},
+  publisher = {Prentice-Hall},
+  edition = {second}
+}
+@inproceedings{Faugeras1992,
+  author = {Faugeras, O.D.},
+  title = {What Can Be Seen in Three Dimensions with an Uncalibrated Stereo Rig},
+  year = {1992},
+  pages = {563--578},
+  month = {May},
+  editor = {Sandini, G.},
+  publisher = {Springer},
+  series = {Lecture Notes in Computer Science 588},
+  address = {Santa Margherita Ligure, Italy},
+  booktitle = {Second European Conference on Computer Vision}
+}
+@article{Dequiedt2001,
+  author = {Dequiedt, A.-S. and Coster, M. and Chermant, L. and Chermant, J.-L.},
+  title = {Study of Phase Dispersion in Concrete by Image Analysis},
+  journal = {Cement \& Concrete Composites},
+  year = {2001},
+  volume = {23},
+  pages = {215--226}
+}
+@article{Tang2002,
+  author = {Tang, C.-K. and Medioni, G.},
+  title = {Curvature-Augmented Tensor Voting for Shape Interference from Noisy 3D Data},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2002},
+  volume = {24},
+  number = {6},
+  pages = {858--864}
+}
+@inproceedings{Hartley1992a,
+  author = {Hartley, R.I.},
+  title = {Estimation of Relative Camera Positions for Uncalibrated Cameras},
+  year = {1992},
+  pages = {579--587},
+  month = {May},
+  editor = {Sandini, G.},
+  publisher = {Springer},
+  series = {Lecture Notes in Computer Science 588},
+  address = {Santa Margherita Ligure, Italy},
+  booktitle = {Second European Conference on Computer Vision}
+}
+@article{Dalen2002,
+  author = {Dalen, G. van},
+  title = {Determination of the Water Droplet Size Distribution of Fat Spreads using Confocal Scanning Laser Microscopy},
+  journal = {Journal of Microscopy},
+  year = {2002},
+  volume = {208 Pt. 2},
+  pages = {116--133},
+  month = {November}
+}
+@article{Bergsma2001,
+  author = {Bergsma, C.B.J. and Streekstra, G.J. and Smeulders, A.W.M. and Manders, E.M.M.},
+  title = {Velocity Estimation of Spots in 3D Confocal Images Sequences of Living Cells},
+  journal = {Cytometry},
+  year = {2001},
+  volume = {43},
+  number = {4},
+  pages = {261--272}
+}
+@article{Florack1999,
+  author = {Florack, L.M.J. and Maas, R. and Niessen, W.J.},
+  title = {Pseudo-linear Scale-space Theory},
+  journal = {International Journal of Computer Vision},
+  year = {1999},
+  volume = {31},
+  number = {2/3},
+  pages = {247--259}
+}
+@phdthesis{Florack1993,
+  author = {Florack, L.M.J.},
+  title = {The Syntactical Structure of Scalar Images},
+  year = {1993},
+  school = {University of Utrecht, The Netherlands}
+}
+@article{Weijer2001a,
+  author = {Weijer, J. van de and Vliet, L.J. van and Verbeek, P.W. and Ginkel, M. van},
+  title = {Curvature estimation in oriented patterns using curvilinear models applied to gradient vector fields},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {9},
+  pages = {1035 -1042}
+}
+@article{Florack1998,
+  author = {Florack, L.M.J. and Niessen, W.J. and Nielsen, M.},
+  title = {The Intrinsic Structure of Optic Flow Incorporating Measurement Duality},
+  journal = {International Journal of Computer Vision},
+  year = {1998},
+  volume = {27},
+  number = {3},
+  pages = {263--286}
+}
+@article{Florack1992,
+  author = {Florack, L.M.J. and Haar Romeny, B.M. ter and Koenderink, J.J. and Viergever, M.A.},
+  title = {Scale and the Differential Structure of Images},
+  journal = {Image and Vision Computing},
+  year = {1992},
+  volume = {10},
+  number = {6},
+  pages = {376--388},
+  month = {July}
+}
+@article{Florack1994,
+  author = {Florack, L.M.J. and Haar Romeny, B.M. ter and Koenderink, J.J. and Viergever, M.A.},
+  title = {Linear Scale-Space},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1994},
+  volume = {4},
+  number = {4},
+  pages = {325--351},
+  month = {December}
+}
+@book{Florack1997,
+  author = {Florack, L.M.J.},
+  title = {Image Structure},
+  year = {1997},
+  publisher = {Kluwer Academic Publishers}
+}
+@article{Kim1990,
+  author = {Kim, N.H. and Bovik, A.C. and Aggarwal, S.J.},
+  title = {Shape Description of Biological Objects via Stereo Light Microscopy},
+  journal = {IEEE Transactions on Systems},
+  year = {1990},
+  volume = {20},
+  number = {2},
+  pages = {475--489}
+}
+@article{Borgefors1996,
+  author = {Borgefors, G.},
+  title = {On digital distance transforms in three dimensions},
+  journal = {Computer Vision and Image Understanding},
+  year = {1996},
+  volume = {64},
+  number = {3},
+  pages = {344-371}
+}
+@article{Komenda2001,
+  author = {Komenda, J.},
+  title = {Automatic Recognition of Complex Microstructures using the Image Classifier},
+  journal = {Materials Characterization},
+  year = {2001},
+  volume = {46},
+  number = {2--3},
+  pages = {87--92}
+}
+@article{Vetterli1984,
+  author = {Vetterli, M. and Nussbaumer, H.J.},
+  title = {Simple {FFT} and {DCT} Algorithms with Reduced Number of Operations},
+  journal = {Signal Processing},
+  year = {1984},
+  volume = {6},
+  pages = {267--278},
+  annote = {key_fft}
+}
+@article{Vetterli1986,
+  author = {Vetterli, M.},
+  title = {Filter Banks Allowing Perfect Reconstruction},
+  journal = {Signal Processing},
+  year = {1986},
+  volume = {10},
+  number = {3},
+  pages = {219--244}
+}
+@article{Florack1996,
+  author = {Florack, L.M.J. and Haar Romeny, B.M. ter and Viergever, M.A. and Koenderink, J.J.},
+  title = {The {Gaussian} Scale-Space Paradigm and the Multiscale Local Jet},
+  journal = {International Journal of Computer Vision},
+  year = {1996},
+  volume = {18},
+  pages = {61--75}
+}
+@phdthesis{Molenaar2003,
+  author = {Molenaar, C.},
+  title = {Methods for molecular analysis in living cells},
+  year = {2003},
+  month = {June},
+  address = {Leiden, The Netherlands},
+  school = {Leiden University Medical Center}
+}
+@inproceedings{Leavers1990,
+  author = {Leavers, V.F.},
+  title = {The Dynamic Generalized {H}ough transform},
+  year = {1990},
+  pages = {592--594},
+  editor = {O. Faugeras},
+  publisher = {Springer-Verlag},
+  booktitle = {Computer Vision -- ECCV90. Proceedings, 1990}
+}
+@book{Leavers1992,
+  author = {Leavers, V.F.},
+  title = {Shape Detection in Computer Vision Using the {H}ough Transform},
+  year = {1992},
+  publisher = {Springer-Verlag},
+  address = {London}
+}
+@article{Morgan2002,
+  author = {Morgan, D.G. and Mnntret, J.-F. and Neuhof, A. and Rapoport, T.A. and Akey, C.W.},
+  title = {Structure of the Mammalian Ribosome-Channel Complex at 17 Resolution},
+  journal = {Journal of Molecular Biology},
+  year = {2002},
+  volume = {324},
+  pages = {871-886}
+}
+@article{Su2003,
+  author = {Su, D.S. and Zandbergen, H.W. and Tiemeijer, P.C. and Kothleitner, G. and {H\"avecker}, M. and {H\'ebert}, C. and Knop-Gericke, A. and Freitag, B.H. and Hofer, F. and {Schl\"ogl}, R.},
+  title = {High resolution EELS using monochromator and high performance spectrometer: comparison of $V_2O_5$ {ELNES} with {NEXAFS} and band structure calculations},
+  journal = {Micron},
+  year = {2003},
+  volume = {34},
+  pages = {235-238}
+}
+@article{Thirion1995,
+  author = {Thirion, J.P. and Gourdon, A.},
+  title = {Computing the differential characteristics of isointensity surfaces},
+  journal = {Computer Vision and Image Understanding},
+  year = {1995},
+  volume = {61},
+  number = {2},
+  pages = {190--202}
+}
+@article{Rao1992,
+  author = {Rao, A.R. and Jain, R.C.},
+  title = {Computerized Flow Field Analysis: Oriented Texture Fields},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1992},
+  volume = {14},
+  number = {7},
+  pages = {693--709},
+  month = {July}
+}
+@article{Potter1999,
+  author = {Potter, C.S. and Chu, H. and Frey, B. and Green, C. and Kisseberth, N. and Madden, T.J. and Miller, K.L. and Nahrstedt, K. and Pulokas, J. and Reilein, A. and Tcheng, D. and Weber, D. and Carragher, B.},
+  title = {Leginon: a system for fully automated acquisition of 1000 electron micrographs a day},
+  journal = {Ultramicroscopy},
+  year = {1999},
+  volume = {77},
+  pages = {153-161}
+}
+@article{Ferraro1988,
+  author = {Ferraro, M. and Caelli, T.M.},
+  title = {Relationship between Integral Transform Invariances and {Lie} Group Theory},
+  journal = {Journal of the Optical Society of America A},
+  year = {1988},
+  volume = {5},
+  number = {5},
+  pages = {738--742},
+  month = {May}
+}
+@article{Rao1991,
+  author = {Rao, A.R. and Schunck, B.G.},
+  title = {Computing Oriented Texture Fields},
+  journal = {CVGIP: Graphical Models and Image Processing},
+  year = {1991},
+  volume = {53},
+  number = {2},
+  pages = {157--185},
+  month = {March}
+}
+@article{Gaspar1997,
+  author = {Gaspar, L.P. and Johnson, J.E. and Silva, J.L. and Poian, A.T. da},
+  title = {Partially Folded States of the Capsid Protein of Cowpea Severe Mosaic Virus in the Disassembly Pathway},
+  journal = {Journal of Molecular Biology},
+  year = {1997},
+  volume = {273},
+  pages = {456-466}
+}
+@article{Rieger2004,
+  author = {Rieger, B. and Vliet, L.J. van},
+  title = {A systematic approach to nD orientation representation},
+  journal = {Image and Vision Computing},
+  year = {2004},
+  volume = {22},
+  number = {6},
+  pages = {453-459}
+}
+@book{Papoulis1977,
+  author = {Papoulis, A.},
+  title = {Signal Analysis},
+  year = {1977},
+  publisher = {McGraw-Hill},
+  address = {New York}
+}
+@article{Hanbury2001,
+  author = {Hanbury, Allan G. and Serra, Jean},
+  title = {Morphological Operators on the Unit Circle},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2001},
+  volume = {10},
+  number = {12},
+  pages = {1842--1850},
+  month = {December}
+}
+@inbook{Porat1994a,
+  author = {Porat, B.},
+  title = {Digital Signal Processing of Random Signals: Theory and Methods},
+  year = {1994},
+  publisher = {Prentice Hall},
+  chapter = {11.4}
+}
+@article{Villasenor1987,
+  author = {Villasenor, J. and Bracewell, R.N.},
+  title = {Optical Phase Obtained by Analogue Hartley Transformation},
+  journal = {Nature},
+  year = {1987},
+  volume = {330},
+  pages = {735--737},
+  month = {December}
+}
+@article{Lacey1998,
+  author = {Lacey, A.J. and Thacker, N.A. and Crossley, S. and Yates, R.B.},
+  title = {A Multi-Stage Approach to the Dense Estimation of Disparity from Stereo {SEM} Images},
+  journal = {Image and Vision Computing},
+  year = {1998},
+  volume = {16},
+  number = {5},
+  pages = {373--383}
+}
+@article{Sengupta2001,
+  author = {Sengupta, J. and Agrawal, R.K. and Frank, J.},
+  title = {Visualization of protein {S1} within the {30S} ribosomal subunit and its interaction with messenger {RNA}},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2001},
+  volume = {98},
+  pages = {11991-11996}
+}
+@article{Domer2003,
+  author = {{D\"omer}, H. and Bostanjoglo, O.},
+  title = {High-speed transmission electron microscope},
+  journal = {Review of Scientific Instruments},
+  year = {2003},
+  volume = {74},
+  number = {10},
+  pages = {4369-4372}
+}
+@inproceedings{Lacey1996,
+  author = {Lacey, A.J. and Thacker, N.A. and Yates, R.B.},
+  title = {Surface Approximation from Industrial {SEM} Images},
+  year = {1996},
+  address = {Edinburgh, Scotland},
+  booktitle = {Proceedings of the British Machine Vision Conference},
+  organization = {University of Edinburgh}
+}
+@article{Kimia1992,
+  author = {Kimia, B. and Tannenbaum, A. and Zucker, S.W.},
+  title = {On the Evolution of Curves via a Function of Curvature. I. The Classical Case},
+  journal = {Journal of Mathematical Analysis and Applications},
+  year = {1992},
+  volume = {163},
+  pages = {438--458}
+}
+@unpublished{Vliet1998b,
+  author = {Vliet, L.J. van},
+  title = {Adaptive Filtering. From Scaleable Elliptic, and Banana to Leech Filters}
+}
+@article{Giro2004,
+  author = {Giro, A. and Bergia, A. and Zuccheri, G. and Bink, H.H.J. and Pleij, C.W.A. and Samori, B.},
+  title = {Single Molecule Studies of {RNA} Secondary Structure: {AFM} of {TYMV} Viral {RNA}},
+  journal = {Microscopy Research and Technique},
+  year = {2004},
+  volume = {65},
+  number = {4},
+  pages = {235-245}
+}
+@inbook{Vliet1998a,
+  author = {Vliet, L.J. van and Sudar, D. and Young, I.T.},
+  title = {Cell Biology},
+  year = {1998},
+  volume = {III},
+  pages = {109-120},
+  editor = {Celis, J.E.},
+  publisher = {Academic Press},
+  address = {New York},
+  edition = {2nd},
+  chapter = {Digital Fluorescence Imaging Using Cooled {CCD} Array Cameras}
+}
+@unpublished{Vliet1998c,
+  author = {Vliet, L.J. van},
+  title = {Detection of End-points}
+}
+@article{Pulokas1999,
+  author = {Pulokas, J. and Green, C. and Kisseberth, N. and Potter, C.S. and Carragher, B.},
+  title = {Improving the positional accuracy of the goniometer on the {Philips CM} series {TEM}},
+  journal = {Journal of Structural Biology},
+  year = {1999},
+  volume = {128},
+  pages = {250-256}
+}
+@article{Ficz2005,
+  author = {Ficz, G. and Heintzmann, R. and Arndt-Jovin, D.J.},
+  title = {Polycomb group complexes exchange rapidly in living {Drosophila}},
+  journal = {Development},
+  year = {2006},
+  volume = {132},
+  number = {17},
+  pages = {3964-3976}
+}
+@article{Thovert1993,
+  author = {Thovert, J.F. and Salles, J. and Adler, P.M.},
+  title = {Computerized Characterization of the Geometry of Real Porous Media: their Discretization, Analysis and Interpretation},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {170, Pt 1},
+  pages = {65--79},
+  month = {April}
+}
+@book{Kincaid1991,
+  author = {Kincaid,D.},
+  title = {Numerical analysis; mathematics of scientific computing},
+  year = {1991},
+  publisher = {Pacific Grove},
+  address = {Brooks/Cole}
+}
+@article{Netten1994,
+  author = {Netten, H. and Vliet, L.J. van and Boddeke, F.R. and Jong, P. de and Young, I.T.},
+  title = {A fast scanner for fluorescence microscopy using a {2-D CCD} amd time delayed integration},
+  journal = {Bioimaging},
+  year = {1994},
+  volume = {2},
+  pages = {184-192}
+}
+@article{Loncaric1998,
+  author = {Loncaric, S.},
+  title = {A Survey of Shape Analysis Techniques},
+  journal = {Pattern Recognition},
+  year = {1998},
+  volume = {31},
+  number = {8},
+  pages = {983--1001}
+}
+@article{Malladi1995,
+  author = {Malladi, R. and Sethian, J.A. and Vemuri, B.C.},
+  title = {Shape Modeling with Front Propagation: A Level Set Approach},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1995},
+  volume = {17},
+  number = {2},
+  pages = {158--175},
+  month = {February}
+}
+@book{Bronstein1999,
+  author = {Bronstein, I. N. and Semendjajew, K. A. and Musiol, G. and {M\"uhlig}, H.},
+  title = {Taschenbuch der Mathematik},
+  year = {1999},
+  publisher = {Verlag Harri Deutsch},
+  address = {Thun, Frankfurt (Main)},
+  edition = {4th}
+}
+@article{Kundur1996,
+  author = {Kundur, D. and Hatzinakos, D.},
+  title = {Blind Image Deconvolution},
+  journal = {IEEE Signal Processing Magazine},
+  year = {1996},
+  volume = {13},
+  number = {3},
+  pages = {43--64},
+  month = {May}
+}
+@article{Levi1970,
+  author = {Levi, G. and Montanari, U.},
+  title = {A grey-weighted skeleton},
+  journal = {Information and Control},
+  year = {1970},
+  volume = {17},
+  number = {1},
+  pages = {62-91},
+  month = {August}
+}
+@book{Press1992,
+  author = {Press, W.H. and Teukolsky, S.A. and Vetterling, W.T. and Flannery, B.P.},
+  title = {Numerical Recipes in C: The Art of Scientific Computing},
+  year = {1992},
+  publisher = {Cambridge University Press},
+  address = {Cambridge},
+  edition = {2}
+}
+@article{Luengo2005,
+  author = {Luengo Hendriks, C.L. and Ginkel, M. van and Verbeek, P.W. and Vliet, L.J. van},
+  title = {The Generalized Radon Transform: Sampling, Accuracy and Memory Considerations},
+  journal = {Pattern Recognition},
+  year = {2005},
+  volume = {38},
+  number = {12},
+  pages = {2494-2505}
+}
+@inproceedings{Lambert2000,
+  author = {Lambert, P. and Macaire, L.},
+  title = {Filtering and Segmentation: the Specificity of Color Images},
+  year = {2000},
+  booktitle = {International Conference on Color in Graphics and Image Processing CGIP'2000}
+}
+@article{Rivetti1998,
+  author = {Rivetti, C. and Walker, C. and Bustamante, C.},
+  title = {Polymer chain statistics and conformational analysis of {DNA} molecules with bends or sections of different flexibility},
+  journal = {Journal of Molecular Biology},
+  year = {1998},
+  volume = {280},
+  number = {1},
+  pages = {41-59}
+}
+@inproceedings{Luengo2000,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Improving resolution to reduce aliasing in an undersampled image sequence},
+  year = {2000},
+  volume = {3965},
+  pages = {2134--222},
+  editor = {Blouke, M. M. and Williams, G.M. and Sampat, N. and Yeh, T.},
+  series = {Proc. SPIE Electronic Imaging 2000 Conf.},
+  address = {San Jose},
+  booktitle = {Sensors and Camera Systems for Sensors and Camera Systems for Scientific, Industrial, and Digital Photography Applications}
+}
+@inproceedings{Luengo2003,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Basic Morphological Operations, Band-Limited Images and Sampling},
+  year = {2003},
+  volume = {2695},
+  pages = {313-324},
+  editor = {Griffin, L.D. and Lillholm, M.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Berlin},
+  booktitle = {Scale Space Methods in Computer Vision, Proceedings of the Fourth International Conference, Scale-Space 2003}
+}
+@article{Rivetti1996,
+  author = {Rivetti, C. and Guthold, M. and Bustamante, C.},
+  title = {Scanning Force Microscopy of {DNA} Deposited onto Mica: Equilibration versus Kinetic Trapping Studied by Statistical Polymer Chain Analysis},
+  journal = {Journal of Molecular Biology},
+  year = {1996},
+  volume = {264},
+  pages = {919-932}
+}
+@article{Kroustrup1988,
+  author = {Kroustrup, J.P. and Gundersen, H.J.G. and V,h, M.},
+  title = {Stereological Analysis of Three-Dimensional Structure Organization of Surfaces in Multiphase Specimens: Statistical Methods and Model-Inferences},
+  journal = {Journal of Microscopy},
+  year = {1988},
+  volume = {149, Pt 2},
+  pages = {135--152},
+  month = {February}
+}
+@article{Saxl1993,
+  author = {Saxl, I.},
+  title = {Contact Distances and Random Free Paths},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {170, Pt 1},
+  pages = {53--64},
+  month = {April}
+}
+@article{Hildreth1984,
+  author = {Hildreth, E.C.},
+  title = {The computation of the velocity field},
+  journal = {Proceedings of the Royal Society of London B},
+  year = {1984},
+  volume = {221},
+  pages = {189-220}
+}
+@article{Summerscales2001,
+  author = {Summerscales, J. and Guild, F.J. and Pearce, N.R.L. and Russell, P.M.},
+  title = {Voronoi Cells, Fractal Dimensions and Fibre Composites},
+  journal = {Journal of Microscopy},
+  year = {2001},
+  volume = {201, Pt 2},
+  pages = {153--162},
+  month = {February}
+}
+@article{Ruiz2003,
+  author = {Ruiz, T. and {Koppenschl\"ager}, G. and Radermacher, M.},
+  title = {The 10.8- structure of Saccharomyces cerevisiae phosphofructokinase determined by cryoelectron microscopy: localization of putative fructose 6-phosphate binding sites},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {143},
+  pages = {124-134}
+}
+@article{Lagerholm2006,
+  author = {Lagerholm, B.C. and Averett, L. and Weinreb, G.E. and Jacobson, K. and Thompson, N.L.},
+  title = {Analysis method for measuring submicroscopic distances with blinking Quantum Dots},
+  journal = {Biophysical Journal},
+  year = {2006},
+  volume = {91},
+  number = {10},
+  pages = {3050-3060}
+}
+@article{Berney2003,
+  author = {Berney, C. and Danuser, G.},
+  title = {{FRET} or no {FRET}: A Quantitative Comparison},
+  journal = {Biophysical Journal},
+  year = {2003},
+  volume = {84},
+  number = {6},
+  pages = {3992-4010}
+}
+@article{Harrigan1984,
+  author = {Harrigan, T.P. and Mann, R.W.},
+  title = {Characterization of Microstructural Anisotropy in Orthotropic Materials Using a Second Rank Tensor},
+  journal = {Journal of Materials Science},
+  year = {1984},
+  volume = {19},
+  pages = {761--767}
+}
+@article{Mironov2003,
+  author = {Mironov, A.A. and Mironov, A.A.Jr. and Beznoussekno, G.V. and Trucco, A. and Lupetti, P. and Smith, J.D. and Geerts, W.J.C. and Koster, A.J. and Burger, K.N.J. and Martone, M.E. and Deerinck, T.J. and Ellisman, M.H. and Luini, A.},
+  title = {{ER-to-Golgi} Carriers Arise through Direct En Bloc Protrusion and Multistage Maturation of Specialized {ER} Exit Domains},
+  journal = {Developmental Cell},
+  year = {2003},
+  volume = {5},
+  pages = {583-594}
+}
+@book{Frankel1997,
+  author = {T. Frankel},
+  title = {The Geometry of Physics},
+  year = {1997},
+  publisher = {Cambridge University Press},
+  address = {Cambridge}
+}
+@article{Shaner2005,
+  author = {Shaner, N.C. and Steinbach, P.A. and Tsien, R.Y.},
+  title = {A guide to choosing fluorescent proteins},
+  journal = {Nature Methods},
+  year = {2005},
+  volume = {2},
+  pages = {905-909}
+}
+@inproceedings{Lozier1994,
+  author = {Lozier, D.W. and Olver, F.W.J.},
+  title = {Numerical Evaluation of Special Functions},
+  year = {1994},
+  volume = {48},
+  pages = {79--125},
+  month = {December},
+  editor = {Gautschi, W.},
+  series = {Proceedings of Symposia in Applied Mathematics},
+  booktitle = {Mathematics of Computation 1943--1993: A Half-Century of Computational Mathematics},
+  organization = {American Mathematical Society},
+  note = {{\tt http://math.nist.gov/nesf/}}
+}
+@inbook{Simmonds1982a,
+  author = {Simmonds, J.G.},
+  title = {A Brief on Tensor Analysis},
+  year = {1982},
+  publisher = {Spring-Verlag},
+  chapter = {1,2}
+}
+@article{Schoenle2002,
+  author = {{Sch\"onle}, A. and Hell, S.W.},
+  title = {Calculation of vectorial three-dimensional transfer functions in large angle focusing systems},
+  journal = {Journal of the Optical Society of America A},
+  year = {2002},
+  volume = {19},
+  number = {10},
+  pages = {2121-2126}
+}
+@phdthesis{Kempen1999a,
+  author = {Kempen, G.M.P. van},
+  title = {Image Restoration in Fluorescence Microscopy},
+  year = {1999},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Min1995,
+  author = {Min, G. and Sheppard, C.J.R.},
+  title = {Comparison of three-dimensional imaging properties between two-photon and single-photon fluorescence microscopy},
+  journal = {Journal of Microscopy},
+  year = {1995},
+  volume = {177},
+  pages = {128--137}
+}
+@article{Min1990,
+  author = {Min, G. and Sheppard, C.J.R.},
+  title = {Image formation in two-photon fluorescence microscopy},
+  journal = {Optik},
+  year = {1990},
+  volume = {86},
+  pages = {104--106}
+}
+@phdthesis{Karlholm1998,
+  author = {Karlholm, J.},
+  title = {Local Signal Models for Image Sequence Analysis},
+  year = {1998},
+  address = {{Link\"oping}, Sweden},
+  school = {{Link\"oping} University}
+}
+@article{Kimoto2005,
+  author = {Kimoto, K. and Kothleitner, G. and Grogger, W. and Matsui, Y. and Hofer, F.},
+  title = {Advantages of a monochromator for bandgap measurements using electron energy-loss spectroscopy},
+  journal = {Micron},
+  year = {2005},
+  volume = {36},
+  pages = {185-189}
+}
+@book{Mallat2001,
+  author = {Mallat, S.G.},
+  title = {A wavelet tour of signal processing},
+  year = {1999},
+  publisher = {John Wiley \& Sons},
+  address = {New York},
+  edition = {2nd edition}
+}
+@book{Walter1994,
+  author = {Walter, W.},
+  title = {{Einf\"uhrung in die Theorie der Distributionen}},
+  year = {1994},
+  publisher = {Spektrum Akademischer Verlag},
+  edition = {3}
+}
+@misc{GinkelWWWqqnvphbv2001,
+  title = {http://www.ph.tn.tudelft.nl/\char126michael/qqnvphnv.html},
+  key = {ZZZZ}
+}
+@article{Cucchiara1998,
+  author = {Cucchiara, R. and Filicori, F.},
+  title = {The Vector-Gradient Hough Transform},
+  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {7},
+  pages = {746--750},
+  month = {July},
+  annote = {key_radon}
+}
+@inproceedings{Mullikien1994,
+  author = {Mullikien, J.C. and Vliet, L.J. van and Netten, H. and Boddeke, F.R. and Feltz, G.W. van der and Young, I.T.},
+  title = {Methods for {CCD} camera characterization},
+  year = {1994},
+  volume = {2173},
+  pages = {73-84},
+  month = {February 9-10},
+  editor = {Titus, H.C. and Waks, A.},
+  address = {San Jose, CA},
+  booktitle = {SPIE Proceedings}
+}
+@techreport{Verbeek1982,
+  author = {Verbeek, P.W.},
+  title = {Space Invariant Image Operations Constructed from Local Direction Detection and Shift Invariant Filters},
+  year = {1982},
+  address = {Pattern Recognition Group},
+  institution = {Delft University of Technology}
+}
+@inproceedings{Verbeek1986,
+  author = {Verbeek, P.W. and Dorst, L. and Verwer, B.J.H. and Groen, F.C.A.},
+  title = {Collision Avoidance and Path Finding through Constrained Distance Transformation in Robot State Space},
+  year = {1986},
+  pages = {634--641},
+  booktitle = {Preprints Intelligent Autonomous Systems (Amsterdam, December 8-11)}
+}
+@article{Verbeek1985,
+  author = {Verbeek, P.W.},
+  title = {A Class of Sampling-error Free Measures in Oversampled Band-Limited Images},
+  journal = {Pattern Recognition Letters},
+  year = {1985},
+  volume = {3},
+  pages = {287--292}
+}
+@article{Verbeek1988,
+  author = {Verbeek, P.W. and Vrooman, H.A. and Vliet, L.J. van},
+  title = {Low-level Image Processing by Max-Min Filters},
+  journal = {Signal Processing},
+  year = {1988},
+  volume = {15},
+  number = {3},
+  pages = {249--258}
+}
+@techreport{Verbeek2000,
+  author = {Verbeek, P.W.},
+  title = {Subspaces of Generalised Projection Operators},
+  year = {2000},
+  address = {Pattern Recognition Group},
+  institution = {Delft University of Technology}
+}
+@inproceedings{Verbeek2003,
+  author = {Verbeek, P.W. and Dijk, J.},
+  title = {The {D}-dimensional inverse vector-gradient operator and its application for scale free image enhancement},
+  year = {2003},
+  pages = {738-745},
+  month = {August 25-27},
+  editor = {Petkov, N. and Westenberg, M.A.},
+  publisher = {Springer},
+  series = {LNCS 2756},
+  address = {Berlin},
+  booktitle = {10th International Conference on Computer Analysis of Images and Patterns (Groningen, The Netherlands) }
+}
+@article{Verbeek1989,
+  author = {Verbeek, P.W. and Verwer, B.J.H.},
+  title = {{2-D} Adaptive Smoothing by {3-D} Distance Transformation},
+  journal = {Pattern Recognition Letters},
+  year = {1989},
+  volume = {9},
+  pages = {53--65}
+}
+@article{Manders1996,
+  author = {Manders, E.M.M. and Hoebe, R. and Strackee, J. and Vossepoel, A.M. and Aten, J.A.},
+  title = {Largest contour segmentation: A tool for the localization of spots in confocal images},
+  journal = {Cytometry Part A},
+  year = {1996},
+  volume = {23},
+  number = {1},
+  pages = {15-21}
+}
+@phdthesis{Boomgaard1992,
+  author = {Boomgaard, R. van den},
+  title = {Mathematical Morphology: Extensions Towards Computer Vision},
+  year = {1992},
+  address = {Amsterdam},
+  school = {University of Amsterdam}
+}
+@article{Boomgaard1999,
+  author = {Boomgaard, R. van den},
+  title = {Affine invariant deformation curves a tool for shape characterization},
+  journal = {Image and Vision Computing},
+  year = {1999},
+  volume = {17},
+  pages = {375--380}
+}
+@article{Bos1992,
+  author = {Bos, A. van den},
+  title = {Ultimate resolution: a mathematical framework},
+  journal = {Ultramicroscopy},
+  year = {1992},
+  volume = {47},
+  number = {1},
+  pages = {298-306}
+}
+@article{Boomgaard1994,
+  author = {Boomgaard, R. van den and Smeulders, A.},
+  title = {The morphological structure of images: The differential equations of morphological scale-space},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1994},
+  volume = {16},
+  number = {11},
+  pages = {1101--1113}
+}
+@article{Manders1993,
+  author = {Manders, E.M.M. and Verbeek, F.J. and Aten, J.A.},
+  title = {Measurement of co-localization of objects in dual-colour confocal images},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {169},
+  number = {3},
+  pages = {375-382}
+}
+@misc{Dijkstra1982,
+  author = {Dijkstra, E.W.},
+  title = {Why Numbering Should Start at Zero},
+  year = {1982},
+  month = {August 11},
+  howpublished = {PDF file}
+}
+@misc{DelftXXXX,
+  author = {Delft, P. van and Botermans,J.},
+  title = {Magische Vierkanten},
+  howpublished = {uit ``Spelen met Puzzels''}
+}
+@article{Mayall1990,
+  author = {Mayall, B.H. and Tucker, J.D. and Christensen, M.L. and Vliet, L.J. van and Young, I.T.},
+  title = {Experience with the {Athena} Semi-Automated Karyotyping System},
+  journal = {Cytometry},
+  year = {1990},
+  volume = {11},
+  number = {1},
+  pages = {59--72}
+}
+@article{Schoenberg1930,
+  author = {Schoenberg, I.},
+  title = {{\"Uber} Variationsvermindernde Lineare Transformationen},
+  journal = {Mathematische Zeitschrift},
+  year = {1930},
+  volume = {32},
+  pages = {321--328}
+}
+@book{Rade1999,
+  author = {{R\aa de}, L. and Westergren, B.},
+  title = {Mathematical Handbook for Science and Engineering},
+  year = {1999},
+  publisher = {Springer Verlag},
+  edition = {4th}
+}
+@article{Blostein1989,
+  author = {Blostein, D. and Ahuja, N.},
+  title = {Shape from Texture: Integrating Texture-Element Extraction and Surface Estimation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1989},
+  volume = {11},
+  number = {12},
+  pages = {1233--1251},
+  month = {December}
+}
+@inproceedings{Hartley1992,
+  author = {Hartley, R. and Gupta, R. and Chang, T.},
+  title = {Stereo from Uncalibrated Cameras},
+  year = {1992},
+  pages = {761--764},
+  month = {15--18 June},
+  address = {Urbana-Champaign, USA},
+  booktitle = {Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition - CVPR'92}
+}
+@article{Patwardhan2002,
+  author = {Patwardhan, A.},
+  title = {Coherent, non-planar illumination of a defocused specimen: consequences for transmission electron microscopy},
+  journal = {Optik},
+  year = {2002},
+  volume = {13},
+  number = {1},
+  pages = {4-12}
+}
+@article{Kybic2002a,
+  author = {Kybic, J. and Blu, T. and Unser, M.},
+  title = {Generalized sampling: A variational approach - Part {II}: Applications},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {2002},
+  volume = {50},
+  number = {8},
+  pages = {1977--1985}
+}
+@inproceedings{Cooper2003,
+  author = {Cooper, D.H. and Madsen, B.R. and Graham, J.},
+  title = {Estimating Motion in Ultrasound Images of the Small Bowel: Optical Flow without Image Structure},
+  year = {2003},
+  pages = {571-578},
+  month = {June 29 -July 2},
+  editor = {{Big\"un}, J. and Gustavsson, T.},
+  publisher = {Springer-Verlag},
+  series = {LNCS 2749},
+  address = {Berlin},
+  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden) }
+}
+@article{Weijer2001,
+  author = {Weijer, J. van de and Vliet, L.J. van and Verbeek, P.W. and Ginkel, M. van},
+  title = {Curvature estimation in oriented patterns using curvilinear models applied to gradient vector fields},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {9},
+  pages = {1035 -1042}
+}
+@article{Weijer2005,
+  author = {Weijer, J. van de and Vliet, L.J. van and Verbeek, P.W. and Ginkel, M. van },
+  title = {Edge and Corner Detection by Photometric Quasi-Invariants},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2005},
+  volume = {27},
+  number = {4},
+  pages = {625-630}
+}
+@article{Unsalan2001,
+  author = {{\"Unsalan}, C. and {Er\c{c}il}, A.},
+  title = {Conversions between Parametric and Implicit Forms Using Polar/Spherical Coordinate Representations},
+  journal = {Computer Vision and Image Understanding},
+  year = {2001},
+  volume = {81},
+  number = {1},
+  pages = {1--25}
+}
+@article{Aguado2000a,
+  author = {Aguado, A.S. and Montiel, E. and Nixon, M.S.},
+  title = {On the Intimate Relationship between the Principle of Duality and the {Hough} Transform},
+  journal = {Proceedings of the Royal Society London A},
+  year = {2000},
+  volume = {456},
+  number = {1995},
+  pages = {503--526}
+}
+@article{Unser1999,
+  author = {Unser, Michael},
+  title = {Splines: A Perfect Fit for Signal and Image Processing},
+  journal = {IEEE Signal Processing Magazine},
+  year = {1999},
+  pages = {22--38},
+  month = {November}
+}
+@article{Haussecker2001,
+  author = {Haussecker, H.W. and Fleet, D.J.},
+  title = {Computing Optical Flow with Physical Models of Brightness Variation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {6},
+  pages = {661--673},
+  month = {June}
+}
+@article{Unser1995,
+  author = {Unser, M. and Thevenaz, P. and Yaroslavsky, L.},
+  title = {Convolution-based interpolation for fast, high-quality rotation of images},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1995},
+  volume = {4},
+  number = {10},
+  pages = {1371-1381}
+}
+@article{Duncan1991,
+  author = {Duncan, J.S. and Lee, F.A. and Smeulders, A.W.M. and Zaret, B.L.},
+  title = {A bending energy model for measurement of cardiac shape deformaty},
+  journal = {IEEE Transactions on Medical Imaging},
+  year = {1991},
+  volume = {10},
+  number = {3},
+  pages = {307--319}
+}
+@article{Unser1991,
+  author = {Unser, M. and Aldroubi, A. and Eden, M.},
+  title = {Fast {B}-Spline Transform for Continuous Image Representation and Interpolation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1991},
+  volume = {13},
+  number = {3},
+  pages = {277--285},
+  month = {March}
+}
+@article{Whitaker1993,
+  author = {Whitaker, R.T. and Pizer, S.M.},
+  title = {A Multi-Scale Approach to Nonuniform Diffusion},
+  journal = {CVGIP Image Understanding},
+  year = {1993},
+  volume = {57},
+  number = {1},
+  pages = {99--110},
+  month = {January}
+}
+@article{Unser1993,
+  author = {Unser, Michael and Aldroubi, Akram and Eden, Murray},
+  title = {{B}-Spline Signal Processing: Part {I} - Theory},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1993},
+  volume = {41},
+  number = {2},
+  pages = {821--833},
+  month = {February}
+}
+@article{Vries2004,
+  author = {Vries, A.H.B. de and Kanger, J.S. and Krenn, B.E. and Driel, R. van},
+  title = {Patterned Electroplating of Micrometer Scale Magnetic Structures on Glass Substrates},
+  journal = {Journal of Microelectromechanical Systems},
+  year = {2004},
+  volume = {13},
+  number = {4},
+  pages = {391-395}
+}
+@article{Vries2005,
+  author = {Vries, A.H.B. de and Krenn, B.E. and Driel, R. van and Kanger, J.S.},
+  title = {Micro Magnetic Tweezers for Nanomanipulation Inside Live Cells},
+  journal = {Biophysical Journal},
+  year = {2005},
+  volume = {88},
+  number = {3},
+  pages = {2137-2144}
+}
+@article{Weijer2001kort,
+  author = {Weijer, J. van de and Vliet, L.J. van and Verbeek, P.W. and Ginkel, M. van },
+  title = {Curvature estimation in oriented patterns using curvilinear models applied to gradient vector fields },
+  journal = {PAMI},
+  year = {2001},
+  volume = {23},
+  number = {9},
+  pages = {1035--1042}
+}
+@misc{DIPlib,
+  author = {Ginkel, M. van and Kempen, G.M.P. van and Luengo Hendriks, C.L. and Rieger, B. and Vliet, L.J. van},
+  title = {{DIPlib}: a scientific image processing library},
+  year = {1995-},
+  note = {Pattern Recognition Group, Department of Applied Physics, Delft University of Technology, {\tt http://www.qi.tnw.tudelft.nl/DIPlib}}
+}
+@article{Michielsen2000,
+  author = {Michielsen, K. and De Raedt, H.},
+  title = {Morphological Image Analysis},
+  journal = {Computer Physics Communications},
+  year = {2000},
+  volume = {132},
+  pages = {94--103}
+}
+@article{Heertje1997,
+  author = {Heertje, I.},
+  title = {Vet Zonder Vet},
+  journal = {Natuur en Techniek},
+  year = {1997},
+  volume = {65},
+  number = {2},
+  pages = {30--40}
+}
+@inproceedings{Tomasi1998a,
+  author = {Tomasi, C. and Manduchi, R.},
+  title = {Bilateral Filtering for Gray and Color Images},
+  year = {1988},
+  pages = {836-846},
+  month = {January 4-7},
+  publisher = {Narosa Publishing House},
+  booktitle = { Proceedings of the Sixth International Conference on Computer Vision, ICCV'98 (Bombay, India)}
+}
+@book{Jain1989,
+  author = {Jain, A.K.},
+  title = {Fundamentals of Digital Image Processing},
+  year = {1989},
+  publisher = {Prentice-Hall}
+}
+@article{Thompson2002,
+  author = {Thompson, R.E. and Larson, D.R. and Webb, W.W.},
+  title = {Precise Nanometer Localization Analysis for Individual Fluorescent Probes},
+  journal = {Biophysical Journal},
+  year = {2002},
+  volume = {82},
+  pages = {2775-2783}
+}
+@techreport{Pizer1990,
+  author = {Pizer, S.M. and Cullip, T.J. and Fredericksen, R.E.},
+  title = {Toward Interactive Object Definition in 3D Scalar Images},
+  year = {1990},
+  institution = {University of North Carolina, U.S.A.},
+  note = {TR90-034}
+}
+@article{Taton2001,
+  author = {Taton, T.A. and Mirkin, C.A. and Lestinger, R.L.},
+  title = {Two-color labeling of oligonucleotide arrays via size-selctive scattering of nanoparticles},
+  journal = {Journal of the American Chemical Society},
+  year = {2001},
+  volume = {123},
+  pages = {5164-5165}
+}
+@article{Orr1993,
+  author = {Orr, R.S.},
+  title = {The Order of Computation for Finite Discrete Gabor Transforms},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1993},
+  volume = {41},
+  number = {1},
+  pages = {122--130},
+  month = {January}
+}
+@article{Marfurt1998,
+  author = {Marfurt, K.J. and Kirlin, R.L. and Farmer, S.L. and Bahorich, M.S.},
+  title = {3-D Seismic Attributes using a Semblance-based coherency algorithm},
+  journal = {Geophysics},
+  year = {1998},
+  volume = {63},
+  number = {4},
+  pages = {1150--1165},
+  month = {July-August}
+}
+@inproceedings{Witkin1983,
+  author = {Witkin, A.},
+  title = {Scale Space Filtering},
+  year = {1983},
+  pages = {1019--1023},
+  month = {October},
+  address = {Karlsruhe, Germany},
+  booktitle = {Proceedings of the International Conference on Artificial Intelligence}
+}
+@article{Doel2001,
+  author = {Doel, L.R. van den and Vliet, L.J. van},
+  title = {Temporal phase unwrapping algorithm for dynamic interference pattern analysis in interference-contrast microscopy},
+  journal = {Applied Optics},
+  year = {2001},
+  volume = {40},
+  number = {25},
+  pages = {4487--4500}
+}
+@inproceedings{Zucker1999,
+  author = {Zucker, S.W.},
+  title = {Complexity and Confusion in Computational Vision},
+  year = {1999},
+  pages = {1--10},
+  month = {June 7-11},
+  booktitle = {SCIA'99 the 11th Scandinavian Conference on Image Analysis (Kangerlussuaq, Greenland)}
+}
+@article{HelOr1998,
+  author = {Hel-Or, Y. and Teo, P.C.},
+  title = {Canonical Decomposition of Steerable Functions},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1998},
+  volume = {9},
+  pages = {83--95}
+}
+@phdthesis{Doel2002,
+  author = {Doel, L.R. van den},
+  title = {Quantitative Microscopic Techniques for Monitoring Dynamic Processes in Microarrays},
+  year = {2002},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Fredrich1997,
+  author = {Fredrich, J.T. and Lindquist, W.B.},
+  title = {Statistical Characterization of the Three-dimensional Microgeometry of Porous Media and Correlation with Macroscopic Transport Properties},
+  journal = {Int. J. Roch Mech. \& Min. Sci.},
+  year = {1997},
+  volume = {34},
+  number = {3-4},
+  pages = {Paper No. 85}
+}
+@article{Fredrich1999,
+  author = {Fredrich, J.T.},
+  title = {3D Imaging of Porous Media using Laser Scanning Confocal Microscopy with Application to Microscale Transport Processes},
+  journal = {Physics and Chemistry of the Earth (A)},
+  year = {1999},
+  volume = {24},
+  number = {7},
+  pages = {551--561}
+}
+@book{Duda2001,
+  author = {Duda, R.O. and Hart, P.E. and Stork, D.G.},
+  title = {Pattern Classification},
+  year = {2001},
+  publisher = {John Wiley \& Sons},
+  edition = {second}
+}
+@article{Fredrich1995,
+  author = {Fredrich, J.T. and {Men\'endez}, B. and Wong, T.F.},
+  title = {Imaging the Pore Structure of Geomaterials},
+  journal = {Science},
+  year = {1995},
+  volume = {268},
+  pages = {276--279},
+  month = {April}
+}
+@article{Whitehouse1974a,
+  author = {Whitehouse, W.J. and Dyson, E.D.},
+  title = {Scanning Electron Microscope Studies of Trabecular Bone in the Proximal End of the Human Femur},
+  journal = {J. Anatomy},
+  year = {1974},
+  volume = {118},
+  pages = {417--444}
+}
+@inproceedings{Beucher1982,
+  author = {Beucher, S.},
+  title = {Watersheds of Functions and Picture Segmentation},
+  year = {1982},
+  pages = {1928-1931},
+  booktitle = {IEEE International Conference on Acoustics, Speech, and Signal Processing}
+}
+@article{Booth2000,
+  author = {Booth, M.J. and Wilson, T.},
+  title = {Strategies for the compensation of specimen-induced spherical aberration in confocal microscopy of skin},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {200},
+  number = {1},
+  pages = {68-74}
+}
+@article{Redon1998,
+  author = {Redon, C. and Chermant, L. and Chermant, J.-L. and Coster, M.},
+  title = {Assessment of Fibre Orientation in Reinforced Concrete using {Fourier} Image Transform},
+  journal = {Journal of Microscopy},
+  year = {1998},
+  volume = {191 Pt 3},
+  pages = {258--265},
+  month = {September}
+}
+@article{Booth2004,
+  author = {Booth, C.R. and Jiang, W. and Baker, M.L. and Zhou, Z.H. and Ludtke, S.J. and Chiu, W.},
+  title = {A 9 single particle reconstruction from {CCD} captured images on a 200 {kV} electron cryomicroscope},
+  journal = {Journal of Structural Biology},
+  year = {2004},
+  volume = {147},
+  pages = {116-127}
+}
+@article{Booth2002,
+  author = {Booth, M.J. and Neil, M.A.A. and Juskaitis, R. and Wilson, T.},
+  title = {Adaptive aberration correction in a confocal microscope},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2002},
+  volume = {99},
+  number = {9},
+  pages = {5788-5792}
+}
+@article{Jakobsen2000,
+  author = {Jakobsen, M. and Johansen, T.A.},
+  title = {Anisotropic approximations for mudrocks: a seismic laboratory study},
+  journal = {Geophysics},
+  year = {2000},
+  volume = {65},
+  number = {6},
+  pages = {1711--1725},
+  month = {November/December}
+}
+@article{Kiryati1991a,
+  author = {Kiryati, N. and Bruckstein, A.M.},
+  title = {On Navigating between Friends and Foes},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1991},
+  volume = {13},
+  number = {6},
+  pages = {602--606},
+  month = {June},
+  annote = {key_radon}
+}
+@article{Gustafsson1999,
+  author = {Gustafsson, M.G.L. and Agard, D.A. and Sedat, J.W.},
+  title = {{I$^5$M}: {3D} widefield light microscopy with better than 100 nm axial resolution},
+  journal = {Journal of Microscopy},
+  year = {1999},
+  volume = {195},
+  number = {1},
+  pages = {10-16}
+}
+@book{Lovell1999,
+  author = {Lovell, M. and Williamson, G. and Harvey, P.},
+  title = {Borehole imaging: Applications and case histories, Geological Society special publication, no. 159},
+  year = {1999},
+  publisher = {Geological Society, London}
+}
+@article{Faydi2001a,
+  author = {Faydi, E. and Andrieu, J. and Laurent, P. and Peczalski, R.},
+  title = {Experimental Study and Modeling of the Ice Crystal Morphology of Model Standard Ice Cream. Part {II}: Heat Transfer Data and Texture Modeling},
+  journal = {Journal of Food Engineering},
+  year = {2001},
+  volume = {48},
+  pages = {293--300}
+}
+@article{Kitchen1982,
+  author = {Kitchen, L. and Rosenfeld, A.},
+  title = {Gray-Level Corner Detection},
+  journal = {Pattern Recognition Letters},
+  year = {1982},
+  volume = {1},
+  number = {2},
+  pages = {95--102}
+}
+@inbook{Digabel1978,
+  author = {Digabel, H. and {Lantu\'ejoul}, C.},
+  title = {Quantitative Analysis of Microstructures in Materials Sciences, Biology and Medicine},
+  year = {1978},
+  pages = {85-99},
+  editor = {Chermant, J. L.},
+  publisher = {Dr. Rieder-Verlag},
+  address = {Stuttgart},
+  chapter = {Iterative Algorithms}
+}
+@article{Leung2000,
+  author = {Leung, Y. and Zhang, J.S. and Xu, Z.B.},
+  title = {Clustering by Scale-space Filtering},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2000},
+  volume = {22},
+  number = {12},
+  pages = {1396--1410},
+  month = {December}
+}
+@article{Tomasi1998,
+  author = {Tomasi, C. and Manduchi, R.},
+  title = {Stereo Matching as a Nearest-Neighbor Problem},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {3},
+  pages = {333--340},
+  month = {March}
+}
+@article{Shi1996,
+  author = {Shi, Y. and He, S. and Hearst, J.E.},
+  title = {Statistical mechanics of the extensible and shearable elastic rod and of {DNA}},
+  journal = {The Journal of Chemical Physics},
+  year = {1996},
+  volume = {105},
+  number = {2},
+  pages = {714-731}
+}
+@article{Schwertner2004,
+  author = {Schwertner, M. and Booth, M.J. and Wilson, T.},
+  title = {Characterizing specimen induced aberrations for high NA adaptive optical microscopy},
+  journal = {Optics Express},
+  year = {2004},
+  volume = {12},
+  number = {26},
+  pages = {6540-6552}
+}
+@article{Ville1948,
+  author = {Ville, J.},
+  title = {{Th\'eorie} et Applications de la Notion de Signal Analytique},
+  journal = {Cables et Transmission},
+  year = {1948},
+  volume = {{2A}},
+  number = {1},
+  pages = {61--74}
+}
+@article{Good1958,
+  author = {Good, I.J.},
+  title = {The Interaction Algorithm and Practical {Fourier} Analysis},
+  journal = {J. Roy. Statist. Soc. Ser. B},
+  year = {1958},
+  volume = {B. 20},
+  pages = {361--372},
+  note = {Addendum in vol B. 22, 1960, pp. 372-375},
+  annote = {key_fft}
+}
+@article{Digman2005a,
+  author = {Digman, M.A. and Brown, C.M. and Sengupta, P. and Wiseman, P.W. and Howritz, A.R. and Grattown, E.},
+  title = {Measuring Fast Dynamics in Solutions and Cells with a Laser Scanning Microscope},
+  journal = {Biophysical Journal},
+  year = {2005},
+  volume = {89},
+  pages = {1317-1327}
+}
+@article{Kiryati1992,
+  author = {Kiryati, N. and Bruckstein, A.M.},
+  title = {What 's in a Set of Points?},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1992},
+  volume = {14},
+  number = {4},
+  pages = {496--500},
+  month = {April},
+  annote = {key_radon}
+}
+@inbook{Rosenfeld1969_Hough,
+  author = {Rosenfeld, A.},
+  title = {Picture Processing by Computer},
+  year = {1969},
+  pages = {151--153},
+  publisher = {Academic Press},
+  chapter = {8. Picture Segmentation},
+  note = {Section 8.4.e. Coordinate Conversion}
+}
+@article{Kiryati1991,
+  author = {Kiryati, N. and Bruckstein, A.M.},
+  title = {Antialiasing the {H}ough transform},
+  journal = {CVGIP: Graphical Models and Image Processing},
+  year = {1991},
+  volume = {53},
+  number = {3},
+  pages = {213--222},
+  month = {May},
+  annote = {key_radon}
+}
+@article{Randen1999,
+  author = {Randen, T. and {Hus\oe y}, H.},
+  title = {Filtering for Texture Classification: A Comparative Study},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1999},
+  volume = {21},
+  number = {4},
+  pages = {291--310},
+  month = {April}
+}
+@article{Birk1979,
+  author = {Birk, J. and Kelley, R. and Chen, N. and Wilson, L.},
+  title = {Image Feature Extraction Using Diameter-Limited Gradient Direction Histograms},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1979},
+  volume = {1},
+  number = {2},
+  pages = {228--235},
+  month = {April}
+}
+@article{Betzig2006,
+  author = {Betzig, E. and Patterson, G.H. and Sougrat, R. and Lindwasser, O.W. and Olenych, S. and Bonifacino, J.S. and Davidson, M.W. and Lippincott-Schwartz, J. and Hess, H.F.},
+  title = {Imaging Intracellular Fluorescent Proteins at Nanometer Resolution},
+  journal = {Science},
+  year = {2006},
+  volume = {313},
+  pages = {1643-1645}
+}
+@article{Lopez2000,
+  author = {{L\'opez}, A.M. and Lloret, D. and Serrat, J. and Villanueva, J.J.},
+  title = {Multilocal Creaseness Based on the Level-Set Extrinsic Curvature},
+  journal = {Computer Vision and Image Understanding},
+  year = {2000},
+  volume = {77},
+  pages = {111--144}
+}
+@book{Stoker1969,
+  author = {Stoker, J.J.},
+  title = {Differential Geometry},
+  year = {1969},
+  publisher = {John Wiley and Sons, Inc}
+}
+@article{Robinson2004a,
+  author = {Robinson, M.D. and Milanfar, P.},
+  title = {Fundamental performance limits in image registration},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2004},
+  volume = {13},
+  number = {9},
+  pages = {1185-1199}
+}
+@article{Frontali1988,
+  author = {Frontali, C.},
+  title = {Excluded-volume effect on the bidimensional conformation of {DNA} molecules adsorbed to protein films},
+  journal = {Biopolymers},
+  year = {1988},
+  volume = {27},
+  number = {8},
+  pages = {1329-1331}
+}
+@article{Veen1981,
+  author = {Veen, T.M. van and Groen, F.C.A.},
+  title = {Discretization Error in the {H}ough transform},
+  journal = {Pattern Recognition},
+  year = {1981},
+  volume = {14},
+  pages = {137--145},
+  annote = {key_radon}
+}
+@article{Eberly1991a,
+  author = {Eberly, D. and Lancaster, J. and Alyassin, A.},
+  title = {On Gray Scale Image Measurements. {II}. Surface Area and Volume},
+  journal = {CVGIP: Graphical Models and Image Processing},
+  year = {1991},
+  volume = {53},
+  number = {6},
+  pages = {550--562},
+  month = {November}
+}
+@article{Stowell1998,
+  author = {Stowell, M.H.B. and Miyazawa, A. and Unwin, N.},
+  title = {Macromolecular structure determination by electron microscopy: new advances and recent results},
+  journal = {Current Opinion Structural Biology},
+  year = {1998},
+  volume = {8},
+  pages = {595-600}
+}
+@article{Yang1997,
+  author = {Yang, L. and Albregtsen, F. and Taxt, T.},
+  title = {Fast Computation of Three-Dimensional Geometric Moments Using a Discrete Divergence Theorem and a Generalization to Higher Dimensions},
+  journal = {Graphical Models and Image Processing},
+  year = {1997},
+  volume = {59},
+  number = {2},
+  pages = {97--108},
+  month = {March}
+}
+@article{Jovin2003,
+  author = {Jovin, T.M.},
+  title = {Quantum dots finally come of age},
+  journal = {Nature Biotechnology},
+  year = {2003},
+  volume = {21},
+  pages = {32-33}
+}
+@article{Ioannidis2000,
+  author = {Ioannidis, M.A. and Chatzis, I.},
+  title = {On the Geometry and Topology of 3D Stochastic Porous Media},
+  journal = {Journal of Colloid and Interface Science},
+  year = {2000},
+  volume = {229},
+  pages = {323--334}
+}
+@article{Srinivasa1996,
+  author = {Srinivasa Reddy, B. and Chatterji, B.N.},
+  title = {A FFT-based technique for translation, rotation and scale-invariant image registration},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1996},
+  volume = {5},
+  number = {8},
+  pages = {1266-1271}
+}
+@article{Zheng1995,
+  author = {Zheng, Q. and Chellappa, R.},
+  title = {Automatic feature point extraction and tracking in image sequences for arbitrary camera motion},
+  journal = {International Journal of Computer Vision},
+  year = {1995},
+  volume = {15},
+  pages = {31--76}
+}
+@article{Mattfeldt1993,
+  author = {Mattfeldt, T. and Frey, H. and Rose, C.},
+  title = {Second-order Stereology of Benign and Malignant Alterations of the Human Mammary Gland},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {171, Pr 2},
+  pages = {143--151},
+  month = {August}
+}
+@book{Campbell2001a,
+  title = {Exploring the Nanoworld with {LEGO} bricks},
+  year = {2001},
+  editor = {Campbell, D.J.}
+}
+@article{Murk2003,
+  author = {Murk, J.L.A.N. and Humbel, B.M. and Ziese, U. and Griffith, J.M. and Posthuma, G. and Slot, J.W. and Koster, A.J. and Verkleij, A.J. and Geuze, H.J. and Kleijmeer, M.J.},
+  title = {Endosomal compartmentalization in three dimensions: Implications for membrane fusion},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2003},
+  volume = {100},
+  number = {23},
+  pages = {13332-13337}
+}
+@article{Chiuso2002,
+  author = {Chiuso, A. and Favaro, P. and Hailin Jin and Soatto, S. },
+  title = {Structure from motion causally integrated over time},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2002},
+  volume = {24},
+  number = {4},
+  pages = {523--535}
+}
+@misc{Atherton1993,
+  author = {Atherton, T.J. and Kerbyson, D.J.},
+  title = {Using Phase to Represent Radius in the Coherent Circle {Hough} Transform},
+  year = {1993},
+  howpublished = {IEE Colloquium on {Hough} Transforms}
+}
+@article{Lidke2005a,
+  author = {Lidke, D.S. and Lidke, K.A. and Rieger, B. and Jovin, T.M. and Arndt-Jovin, D.J.},
+  title = {Reaching out for signals: filopodia sense {EGF} and respond by directed retrograde transport of activated receptors},
+  journal = {Journal of Cell Biology},
+  year = {2005},
+  volume = {170},
+  pages = {619-626}
+}
+@article{Squire2000,
+  author = {Squire, D. and Caelli, T.},
+  title = { Invariant Signatures: Characterizing Contours by their Departures from Invariance},
+  journal = {Computer Vision and Image Understanding},
+  year = {2000},
+  volume = {77},
+  number = {3},
+  pages = {284--316}
+}
+@article{Lidke2005b,
+  author = {Lidke, K.A. and Rieger, B. and Jovin, T.M. and Heintzmann, R.},
+  title = {Superresolution by localization of quantum dots using blinking statistics},
+  journal = {Optics Express},
+  year = {2005},
+  volume = {13},
+  number = {18},
+  pages = {7052-7062}
+}
+@article{Rosenfeld1968,
+  author = {Rosenfeld, A. and Pfaltz, J.L.},
+  title = {Distance functions on digital pictures},
+  journal = {Pattern Recognition},
+  year = {1968},
+  volume = {1},
+  number = {1},
+  pages = {33-61},
+  month = {july}
+}
+@article{Garini1999,
+  author = {Garini, Y. and Bar-Am, G.I. and Cabib, D. and Katzir, N.},
+  title = {Signal to Noise Analysis of Multiple Color Fluorescence Imaging Microscopy},
+  journal = {Cytometry},
+  year = {1999},
+  volume = {35},
+  number = {3},
+  pages = {214-226}
+}
+@article{Yuen1997,
+  author = {Yuen, S.Y. and Ma, C.H.},
+  title = {An Investigation of the Nature of Parameterization for the {Hough} Transform},
+  journal = {Pattern Recognition},
+  year = {1997},
+  volume = {30},
+  number = {6},
+  pages = {1009--1040}
+}
+@inproceedings{Niessen1994,
+  author = {Niessen, W.J. and Haar Romeny, B.M. ter and Florack, L.M.J. and Salden, A.H. and Viergever, M.A.},
+  title = {Nonlinear Diffusion of Scalar Images using Well-Posed Differential Operators},
+  year = {1994},
+  pages = {92--97},
+  booktitle = {CVPR'94 (Seattle, U.S.A.)}
+}
+@book{Rosenfeld1969,
+  author = {Rosenfeld, A.},
+  title = {Picture Processing by Computer},
+  year = {1969},
+  publisher = {Academic Press}
+}
+@article{Besl1992,
+  author = {Besl, P.J. and McKay, N.D.},
+  title = {A method for registration of {3-D} shapes},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1992},
+  volume = {14},
+  number = {2},
+  pages = {239-256}
+}
+@article{Neher2004a,
+  author = {Neher, R.A. and Neher, E.},
+  title = {Optimizing imaging parameters for the separation of multiple labels in a fluorescence image},
+  journal = {Journal of Microscopy},
+  year = {2004},
+  volume = {213},
+  number = {1},
+  pages = {46-62}
+}
+@article{Kempen1997,
+  author = {Kempen, G.M.P. van and Vliet, L.J. van and Verveer, P.J. and Voort, H.T.M. van der},
+  title = {A Quantitative Comparison of Image Restoration Methods for Confocal Microscopy},
+  journal = {Journal of Microscopy},
+  year = {1997},
+  volume = {185},
+  number = {3},
+  pages = {354--365}
+}
+@article{Walters1987,
+  author = {Walters, D.},
+  title = {Selection of Image Primitives for General-Purpose Visual Processing},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1987},
+  volume = {37},
+  pages = {261--298}
+}
+@article{Heintzmann2001,
+  author = {Heintzmann, R. and Hanley, Q.S. and Ardent-Jovin, D.J. and Jovin, T.M.},
+  title = {A dual path programmable array microscope ({PAM}): simultaneous acquisition of conjugate and non-conjugate images},
+  journal = {Journal of Microscopy},
+  year = {2001},
+  volume = {204},
+  pages = {119-135}
+}
+@inproceedings{Kempen1999,
+  author = {Kempen, G.M.P. van and Brink, N. van den and Vliet, L.J. van and Ginkel, M. van and Verbeek, P.W.},
+  title = {The Application of a Local Dimensionality Estimator to the Analysis of 3D Microscopic Network Structures},
+  year = {1999},
+  pages = {447--455},
+  month = {June 7-11},
+  booktitle = {SCIA'99, Proc. 11th Scandinavian Conference on Image Analysis (Kangerlussuaq, Greenland)}
+}
+@manual{Ieee1985,
+  author = {IEEE},
+  title = {{IEEE} Standard for Binary Floating-Point Arithmetic},
+  year = {1985},
+  address = {Standards Committee of the {IEEE} Computer Society},
+  note = {Std. 754-1985}
+}
+@article{Cairney2001,
+  author = {Cairney, J.M. and Munroe, P.R. and Sordelet, D.J.},
+  title = {Microstructural Analysis of a FeAl/quasicrystal-based composite prepared using a focused ion beam miller},
+  journal = {Journal of Microscopy},
+  year = {2001},
+  volume = {201, Pt 2},
+  pages = {201--211},
+  month = {February}
+}
+@article{Chen1994,
+  author = {Chen, Y.S.},
+  title = {Segmentation and Association Among Lines and Junctions for a Line Image},
+  journal = {Pattern Recognition},
+  year = {1994},
+  volume = {27},
+  number = {9},
+  pages = {1135--1157}
+}
+@inproceedings{Hurley1999,
+  author = {Hurley, D.J. and Nixon, M.S. and Carter, J.N.},
+  title = {Force Field Energy Functionals for Image Feature Extraction},
+  year = {1999},
+  volume = {2},
+  pages = {604--613},
+  editor = {Pridmore, T. and Elliman, D.},
+  booktitle = {10th British Machine Vision Conference}
+}
+@book{Kay1993,
+  author = {Kay, S.M.},
+  title = {Fundamentals of Statistical Processing: Estimation Theory},
+  year = {1993},
+  publisher = {Prentice Hall},
+  address = {New Jersey}
+}
+@article{Chen1993,
+  author = {Chen,Y.S. and Chang, S.L. and Hsu, W.H.},
+  title = {An Improved Line Continuation Model in Human Visual Perception},
+  journal = {Pattern Recognition},
+  year = {1993},
+  volume = {26},
+  number = {6},
+  pages = {825--842}
+}
+@article{Goldberg1991,
+  author = {Goldberg, D.},
+  title = {What Every Computer Scientist Should Know about Floating-Point Arithmetic},
+  journal = {ACM Computing Surveys},
+  year = {1991},
+  volume = {23},
+  number = {1},
+  pages = {5--48}
+}
+@article{Mancini2000,
+  author = {Mancini, E.J. and Fuller, S.D.},
+  title = {Supplanting crystallography or supplementing microscopy? A combined approach to the study of an enveloped virus},
+  journal = {Acta Crystallographica Section D},
+  year = {2000},
+  volume = {56},
+  pages = {1278-1287}
+}
+@inproceedings{Aguado1997,
+  author = {Aguado, A.S. and Montiel, M.E. and Nixon, M.S.},
+  title = {Arbitrary Shape {Hough} Transform by Invariant Geometric Features},
+  year = {1997},
+  volume = {3},
+  pages = {2661--2665},
+  month = {12--15 October},
+  booktitle = {International Conference on Systems, Man and Cybernetics},
+  organization = {IEEE}
+}
+@inproceedings{Granlund1997,
+  author = {Granlund, G.H.},
+  title = {From Multidimensional Signals to the Generation of Responses},
+  year = {1997},
+  volume = {1315},
+  editor = {Sommer, G. and Koenderink, J.J.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Kiel, Germany},
+  booktitle = {Algebraic Frames for the Perception-Action Cycle (AFPAC 1997)}
+}
+@article{Smit1998,
+  author = {Smit, Th.H. and Schneider, E. and Odgaard, A.},
+  title = {Star Length Distribution: a Volume-Based Concept for the Characterization of Structural Anisotropy},
+  journal = {Journal of Microscopy},
+  year = {1998},
+  volume = {191},
+  number = {3},
+  pages = {249--257},
+  month = {September}
+}
+@book{Granlund1995,
+  author = {Granlund, G.H. and Knutsson, H.},
+  title = {Signal processing for computer vision},
+  year = {1995},
+  publisher = {Kluwer Academic Publishers},
+  address = {Boston/Dordrecht/London}
+}
+@mastersthesis{Brink1999,
+  author = {Brink, N. van den},
+  title = {Three Dimensional Image Analysis of Microstructures in Microscopical Images},
+  year = {1999},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Acton2000a,
+  author = {Acton, Scott T. and Mukherjee, Dipti Prasad},
+  title = {Area Operators for Edge Detection},
+  journal = {Pattern Recognition Letters},
+  year = {2000},
+  volume = {21},
+  pages = {771--777}
+}
+@article{Forster2005,
+  author = {{F\"orster},F. and Medalia, O. and Zauberman, N. and Baumeiser, W. and Fass, D.},
+  title = {Retrovirus envelope protein complex structure in situ studied by cryo-electron tomography},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2005},
+  volume = {102},
+  number = {13},
+  pages = {4729-4734}
+}
+@article{Mardia1999,
+  author = {Mardia, K.V. and Morris, R.J. and Walder, A.N. and Koenderink, J.J},
+  title = {Estimation of torsion},
+  journal = {Journal of Applied Statistics},
+  year = {1999},
+  volume = {26},
+  pages = {373--381}
+}
+@article{Torr1997,
+  author = {Torr, P.H.S. and Zisserman, A.},
+  title = {Robust Parameterization and Computation of the Trifocal Tensor},
+  journal = {Image and Vision Computing},
+  year = {1997},
+  volume = {15},
+  number = {8},
+  pages = {591--605}
+}
+@article{Richards1959,
+  author = {Richards, B. and Wolf, E.},
+  title = {Electromagnetic Diffraction in Optical Systems. {II.} Structure of the Image Field in an Aplanatic System},
+  journal = {Proceedings of the Royal Society of London A},
+  year = {1959},
+  volume = {253},
+  number = {1274},
+  pages = {358-379}
+}
+@incollection{Yuille1988,
+  author = {Yuille, A.L. and Poggio, T.},
+  title = {Scaling and fingerprint theorems for zero-crossings},
+  year = {1988},
+  pages = {47--78},
+  editor = {Christopher Brown},
+  publisher = {Lawrence Erlbaum Associates, Inc},
+  chapter = {2},
+  booktitle = {Advances in computer vision, volume 2}
+}
+@article{Zucker1985,
+  author = {Zucker, S.W.},
+  title = {Early Orientation Selection: Tangent Fields and the Dimensionality of Their Support},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1985},
+  volume = {32},
+  pages = {74--103}
+}
+@article{Zucker1981,
+  author = {Zucker, S.W. and Hummel, R.A.},
+  title = {A 3-D edge operator},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1981},
+  volume = {3},
+  number = {3},
+  pages = {324--331}
+}
+@article{Kurdy1989,
+  author = {Kurdy, M.B. and Jeulin, D.},
+  title = {Directional Mathematical morphology Operations},
+  journal = {Acta. Stereology},
+  year = {1989},
+  volume = {8},
+  number = {2},
+  pages = {473--480}
+}
+@article{Post2005,
+  author = {Post, J.N. and Lidke, K.A. and Rieger, B. and Arndt-Jovin, D.J.},
+  title = {One- and two-photon photoactivation of a {paGFP}-fusion protein in live {Drosophila} embryos},
+  journal = {FEBS Letters},
+  year = {2005},
+  volume = {579},
+  number = {2},
+  pages = {325-330}
+}
+@article{Bitter2001,
+  author = {Bitter, I. and Kaufman, A.E.},
+  title = {Penalized-Distance Volumetric Skeleton Algorithm},
+  journal = {IEEE Transactions on Visualization and Computer Graphics},
+  year = {2001},
+  volume = {7},
+  number = {3},
+  pages = {195--205},
+  month = {July--September}
+}
+@article{Jeulin2001,
+  author = {Jeulin, D. and Monnaie, P. and P?onnet, F.},
+  title = {Gypsum Morphological Analysis and Modeling},
+  journal = {Cement {\&} Concrete Composites},
+  year = {2001},
+  volume = {23},
+  pages = {299--311}
+}
+@article{OConner1999,
+  author = {O'Conner, R.M. and Fredrich, J.T.},
+  title = {Microscale Flow Modeling in Geologic Materials},
+  journal = {Phys. Chem. Earth (A)},
+  year = {1999},
+  volume = {24},
+  number = {7},
+  pages = {611--616}
+}
+@inproceedings{Bluestein1968,
+  author = {Bluestein, L.I.},
+  title = {A Linear Filtering Approach to the Computation of the Discrete {Fourier} Transform},
+  year = {1968},
+  volume = {10},
+  pages = {218--129},
+  booktitle = {Northeast Electronics Res. and Eng. Meeting Record},
+  annote = {key_fft}
+}
+@article{Thust1996a,
+  author = {Thust, A. and Coene, W.M.J. and Beeck, M. op de and Dyck, D. van},
+  title = {Focal-series reconstruction in {HRTEM}: simulation studies on non-peridc objects},
+  journal = {Ultramicroscopy},
+  year = {1996},
+  volume = {64},
+  pages = {211-230}
+}
+@book{Valeur2002,
+  author = {Valeur, B.},
+  title = {Molecular Fluorescence},
+  year = {2002},
+  publisher = {Wiley-VCH},
+  address = {Weinheim}
+}
+@article{Hiraoka1992,
+  author = {Hiraoka, Y. and Agard, D.A. and Sedat, J.W.},
+  title = {Temporal and Spatial Coordination of Chromosome Movement, Spindle Formation, and Nuclear Envelope Breakdown During Prometaphase in Drosophila melanogaster Embryos},
+  journal = {The Journal of Cell Biology},
+  year = {1992},
+  volume = {111},
+  number = {6},
+  pages = {2815-2828}
+}
+@article{Heeger1988,
+  author = {Heeger, D.J..},
+  title = {Optical flow from spatio-temporal filters},
+  journal = {International Journal of Computer Vision},
+  year = {1988},
+  volume = {1},
+  pages = {279--302}
+}
+@article{Cox1999,
+  author = {Cox, R.W. and Raoqiong, T.},
+  title = {Two- and Three-Dimensional Image Rotation Using the {FFT}},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1999},
+  volume = {8},
+  number = {9},
+  pages = {1297--1299},
+  month = {September},
+  annote = {key_fft}
+}
+@article{Parent1989,
+  author = {Parent, P. and Zucker, S.W.},
+  title = {Trace Inference, Curvature Consistency, and Curve Detection},
+  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
+  year = {1989},
+  volume = {11},
+  number = {8},
+  pages = {823--839},
+  month = {August}
+}
+@article{Ludtke2001,
+  author = {Ludtke, S.J. and Jakana, J. and Song, J.-L. and Chuang, D.T. and Chiu, W.},
+  title = {A 11.5 single particle reconstruction of {GroEL} using {EMAN}},
+  journal = {Journal of Molecular Biology},
+  year = {2001},
+  volume = {314},
+  pages = {253-262}
+}
+@article{Niessen1997,
+  author = {Niessen, W.J. and Duncan, J.S. and Nielsen, M. and Florack, L.M.J. and Haar Romeny, B.M. ter and Viergever, M.A.},
+  title = {A multiscale approach to image sequence analysis},
+  journal = {Computer Vision and Image Understanding},
+  year = {1997},
+  volume = {65},
+  number = {2},
+  pages = {259-268}
+}
+@article{Hirsh1976,
+  author = {Hirsh, J. and Schleif, R.},
+  title = {High resolution electron microscopic studies of genetic regulation},
+  journal = {Journal of Molecular Biology},
+  year = {1976},
+  volume = {108},
+  number = {2},
+  pages = {471-490}
+}
+@article{Gemkow2001,
+  author = {Gemkow, M.J. and Dichter, J. and Ardent-Jovin, D.J.},
+  title = {Develpoment regulation of {DNA}-topoisomerases during Drosophila embryogenesis},
+  journal = {Experimental Cell Research},
+  year = {2001},
+  volume = {262},
+  pages = {114-121}
+}
+@book{Grivet1965,
+  author = {Grivet, P.},
+  title = {Electron Optics},
+  year = {1965},
+  publisher = {Pergamon Press},
+  address = {London},
+  note = {Copy Peter Tiemeijer}
+}
+@inproceedings{Forstner1987,
+  author = {{F\"orstner}, W. and {G\"ulch}, E.},
+  title = {A Fast Operator for Detection and Precise Location of Distinct Points, Corners and Centres of Circular Features},
+  year = {1987},
+  pages = {149--155},
+  month = {June},
+  booktitle = {ISPRS Intercommission Workshop (Interlaken)},
+  annote = {Not in collection}
+}
+@article{Squire2004,
+  author = {Squire, A. and Verveer, P.J. and Rocks, O. and Bastiaens, P.I.H.},
+  title = {Red-edge anisotropy microscopy enables dynamic imaging of homo-{FRET} between fluorescent proteins in cells},
+  journal = {Journal of Structural Biology},
+  year = {2004},
+  volume = {147},
+  number = {1},
+  pages = {62-69}
+}
+@phdthesis{Westin1994,
+  author = {Westin, C.F.},
+  title = {A Tensor Framework for Multidimensional Signal Processing},
+  year = {1994},
+  address = {{Link\"oping, Sweden}},
+  school = {{Link\"oping University}}
+}
+@inproceedings{Matheron2002,
+  author = {Matheron, G. and Serra, J.},
+  title = {The Birth of Mathematical Morphology},
+  year = {2002},
+  editor = {Talbot, H. and Beare, R.},
+  publisher = {CSIRO Publishing},
+  address = {Collingwood, Australia},
+  booktitle = {Mathematical Morphology, Proceedings of the VI International Symposium ISMM, Sydney, April 2002}
+}
+@article{Gauch1993,
+  author = {Gauch, J.M. and Pizer, S.M.},
+  title = {Multiresolution Analysis of Ridges and Valleys in Grey-Scale Images},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Analysis},
+  year = {1993},
+  volume = {15},
+  number = {6},
+  pages = {635--646},
+  month = {June}
+}
+@article{Dellby2001,
+  author = {Bellby, N. and Krinvanek, O.L. and Nellist, P.D. and Batson, P.E. and Lupini, A.R.},
+  title = {Progress in aberration-corrected scanning transmission electron microscopy},
+  journal = {Journal of Electron Microscopy},
+  year = {2001},
+  volume = {50},
+  number = {3},
+  pages = {177-185}
+}
+@inproceedings{Westin1992,
+  author = {Westin, C.-F. and Knutsson, H.},
+  title = {The {M\"obius} Strip Parameterization for Line Extraction},
+  year = {1992},
+  volume = {588},
+  pages = {33--38},
+  publisher = {Springer-Verlag},
+  booktitle = {Computer Vision -- ECCV92. Proceedings, 1992}
+}
+@article{Gauch1993a,
+  author = {Gauch, J.M. and Pizer, S.M.},
+  title = {The Intensity Axis of Symmetry and its Application to Image Segmentation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1993},
+  volume = {15},
+  number = {8},
+  pages = {753--770},
+  month = {August}
+}
+@article{Bruun1978,
+  author = {Bruun, G.},
+  title = {z-Transform {DFT} Filters and {FFT}'s},
+  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
+  year = {1978},
+  volume = {26},
+  number = {1},
+  pages = {56--63},
+  month = {February},
+  annote = {key_fft}
+}
+@article{Cheng1992,
+  author = {Cheng, F. and Venetsanopoulos, A. N.},
+  title = {An Adaptive Morphological Filter for Image Processing},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1992},
+  volume = {1},
+  number = {4},
+  pages = {533-539}
+}
+@article{Rockmore2000,
+  author = {Rockmore, D.},
+  title = {The {FFT} -- An Algorithm the Whole Family Can Use},
+  journal = {Computing in Science \& Engineering},
+  year = {2000},
+  volume = {2},
+  number = {1},
+  pages = {60--64},
+  month = {January/February}
+}
+@book{Porat1994,
+  author = {Porat, B.},
+  title = {Digital Signal Processing of Random Signals},
+  year = {1994},
+  publisher = {Prentice Hall}
+}
+@inproceedings{Knutsson1981a,
+  author = {Knutsson, H. and Wilson, R. and Granlund, G.H.},
+  title = {Anisotropic Filtering Controlled by Image Content},
+  year = {1981},
+  booktitle = {Proceedings of the 2nd Scandinavian Conference on Image Analysis (Finland)}
+}
+@book{Chung1974,
+  author = {Chung, K.L.},
+  title = {Elementary Probability Theory with Stochastic Processes},
+  year = {1974},
+  publisher = {Springer Verlag},
+  edition = {second}
+}
+@inproceedings{Barman1991a,
+  author = {{B\aa rman}, H. and Haglund, L. and Granlund, G. H. and Knutsson, H.},
+  title = {Estimation of velocity, acceleration and disparity in time sequences},
+  year = {1991},
+  pages = {44-51},
+  booktitle = {Proc. Conf. Pattern Recognition ICPR'91}
+}
+@article{Gui2000,
+  author = {Gui, L. and Merzkirch, W.},
+  title = {A comparative study of the MQD method and several correlation-based PIV evaluation algorithms},
+  journal = {Experiments in Fluids},
+  year = {2000},
+  volume = {28},
+  number = {1},
+  pages = {36-44}
+}
+@article{Li1994,
+  author = {Li, X. and Chen, T.},
+  title = {Nonlinear Diffusion with Multiple Edginess Thresholds},
+  journal = {Pattern Recognition},
+  year = {1994},
+  volume = {27},
+  number = {8},
+  pages = {1029--1037}
+}
+@article{Canny1986,
+  author = {Canny, J.},
+  title = {A Computational Approach to Edge Detection},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1986},
+  volume = {8},
+  number = {6},
+  pages = {679--697},
+  month = {November}
+}
+@article{Rodrigo2004a,
+  author = {Rodrigo, P.J. and Daria, V.R. and {Gl\"uckstad}, J.},
+  title = {Real-time three-dimensional optical micromanipulation of multiple particles and living cells},
+  journal = {Optics Letters},
+  year = {2005},
+  volume = {29},
+  number = {19},
+  pages = {2270-2273}
+}
+@inproceedings{Bracewell1984,
+  author = {Bracewell, R.N.},
+  title = {The Fast {H}artley Transform},
+  year = {1984},
+  pages = {1010--1018},
+  month = {August},
+  booktitle = {Proc. IEEE},
+  annote = {key_fft}
+}
+@article{Coggins1985,
+  author = {Coggins, J.M. and Jain, A.K.},
+  title = {A Spatial Filtering Approach to Texture Analysis},
+  journal = {Pattern Recognition Letters},
+  year = {1985},
+  volume = {3},
+  pages = {195--203}
+}
+@inproceedings{Li1998,
+  author = {Li, H. and Vossepoel, A.M.},
+  title = {Generation of the {Euclidean} Skeleton by a Bisector Decision Rule on a Two-Shortest-Vector Distance Map},
+  year = {1998},
+  volume = {12},
+  pages = {151--158},
+  editor = {Heijmans, H.J.A.M. and Roerdink, J.B.T.M.},
+  publisher = {Kluwer, Dordrecht},
+  series = {Computational Imaging and Vision},
+  booktitle = {Mathematical Morphology and its Applications to Image and Signal Processing}
+}
+@article{Horbelt2002,
+  author = {Horbelt, Stefan and Liebling, Michael and Unser, Michael},
+  title = {Discretization of the Radon Transform and of its Inverse by Spline Convolutions},
+  journal = {IEEE Transactions on Medical Imaging},
+  year = {2002},
+  volume = {21},
+  number = {4},
+  pages = {363--376},
+  month = {April}
+}
+@article{Bracewell1983,
+  author = {Bracewell, R.N.},
+  title = {Discrete {H}artley Transform},
+  journal = {J. Opt. Soc. Am.},
+  year = {1983},
+  volume = {73},
+  number = {12},
+  pages = {1832--1835},
+  month = {December},
+  annote = {key_fft}
+}
+@article{Duda1972,
+  author = {Duda, R.O. and Hart, P.E.},
+  title = {Use of the {Hough} Transformation to Detect Lines and Curves in Pictures},
+  journal = {Communications of the ACM},
+  year = {1972},
+  volume = {15},
+  number = {1},
+  pages = {11--15}
+}
+@article{Hopt2001,
+  author = {Hopt, A. and Neher, E.},
+  title = {Highly Nonlinear Photodamage in Two-Photon Fluorescence Microscopy},
+  journal = {Biophysical Journal},
+  year = {2001},
+  volume = {80},
+  number = {4},
+  pages = {2029-2036},
+  month = {April}
+}
+@article{Jensen2000,
+  author = {Jensen, G.J. and Kornberg, R.D.},
+  title = {Defocus-gradient corrected back-projection},
+  journal = {Ultramicroscopy},
+  year = {2000},
+  volume = {84},
+  pages = {57-64}
+}
+@article{Sanz1989,
+  author = {Sanz, J.L.C. and Huang, T.T.},
+  title = {Image Representation by Sign Information},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1989},
+  volume = {11},
+  number = {7},
+  pages = {729--738},
+  month = {July}
+}
+@article{Batson2003,
+  author = {Batson, P.E.},
+  title = {Aberration correction results in the {IBM STEM} instrument},
+  journal = {Ultramicroscopy},
+  year = {2003},
+  volume = {96},
+  pages = {239-249}
+}
+@article{Dorst2000,
+  author = {Dorst, L. and Boomgaard, R. van den},
+  title = {The Support Cone: A Representational Tool for the Analysis of Boundaries and Their Interactions},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2000},
+  volume = {22},
+  number = {2},
+  pages = {174--178},
+  month = {February}
+}
+@article{Torre1986,
+  author = {Torre, V. and Poggio, T.A.},
+  title = {On Edge Detection},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1986},
+  volume = {8},
+  number = {2},
+  pages = {1986},
+  month = {March}
+}
+@article{Montanari1968,
+  author = {Montanari,U.},
+  title = {A Method for Obtaining Skeletons Using a Quasi-Euclidean Distance.},
+  journal = {Journal of the Association for Computing Machinery},
+  year = {1968},
+  volume = {15},
+  number = {4},
+  pages = {600-624}
+}
+@inproceedings{Anwander2000,
+  author = {Anwander, A. and Neyran, B. and Baskurt, A.},
+  title = {Segmentation of Crystals in Microscopic Images using Multi-scale Color Gradient (MCG)},
+  year = {2000},
+  booktitle = {International Conference on Color in Graphics and Image Processing CGIP2000}
+}
+@inproceedings{Ginkel1997a,
+  author = {Ginkel, M. van and Verbeek, P.W. and van Vliet, L.J.},
+  title = {Multi-Orientation Estimation: Selectivity and Localization},
+  year = {1997},
+  pages = {99--105},
+  month = {June 2-4},
+  editor = {Bal, H.E. and Corporaal, H. and Jonker, P.P. and Tonino, J.F.M.},
+  booktitle = {Proceedings of the 3rd Annual Conference of the Advanced School for Computing and Imaging (Heijen, The Netherlands)}
+}
+@article{Chen1989,
+  author = {Chen, Y.S. and Hsu, W.H.},
+  title = {An Interpretive Model of Line Continuation in Human Visual Perception},
+  journal = {Pattern Recognition},
+  year = {1989},
+  volume = {22},
+  number = {5},
+  pages = {619--639}
+}
+@inproceedings{Ehrich1978,
+  author = {Ehrich, R.W. and Lai, P.F.},
+  title = {Elements of a structural model of texture},
+  year = {1978},
+  pages = {319--326},
+  booktitle = {Proceedings of PRIP}
+}
+@misc{Lasenby1999,
+  author = {Lasenby, A. and Doran, C.},
+  title = {A Lecture Course in Geometric Algebra},
+  year = {1999},
+  howpublished = {{\tt http://www.mrao.cam.ac.uk/~clifford/ptIIIcourse/course99/}, Geometric Algebra Research Group, Cambridge University}
+}
+@inproceedings{Beaudet1978,
+  author = {Beaudet, P.R.},
+  title = {Rotationally Invariant Image Operators},
+  year = {1978},
+  pages = {579--583},
+  booktitle = {International Joint Conference on Pattern Recognition}
+}
+@article{Yildiz2003,
+  author = {Yildiz, A. and Forkey, J.N. and McKinney, S.A. and Ha, T. and Goldman, Y.E. and Selvin, P.R.},
+  title = {Myosin V Walks Hand-Over-Hand: Single Fluorophore Imaging with 1.5 nm localization},
+  journal = {Science},
+  year = {2003},
+  volume = {300},
+  pages = {2061-2066}
+}
+@article{ArndtJovin2006,
+  author = {Arndt-Jovin, D.J. and Lidke, D.S. and Lidke, K.A. and Rieger, B. and Jovin, T.M.},
+  title = {Quantum dots shed light on processes in living cells},
+  journal = {SPIE Newsroom},
+  year = {2006},
+  volume = {DOI: 10.1117/2.1200605.0228},
+  pages = {1-3}
+}
+@article{Westerweel2000,
+  author = {Westerweel, J.},
+  title = {Theoretical analysis of the measurement precision in particle image velocimetry},
+  journal = {Experiments in Fluids },
+  year = {2000},
+  volume = {29},
+  number = {7},
+  pages = {S3-S12}
+}
+@article{Schenkeveld1997,
+  author = {Schenkeveld, V.M.E. and Young, I.T.},
+  title = {Simulations of Measurements of Fluorescene Lifetimes Using Noise-Modulated Light},
+  journal = {Journal of Fluorescence},
+  year = {1997},
+  volume = {7},
+  number = {1},
+  pages = {55-58}
+}
+@article{Calabi1998,
+  author = {Calabi, E. and Olver, P.J. and Shakiban, C. and Tannenbaum, A. and Haker, S.},
+  title = {Differential and Numerically Invariant Signature Curves Applied to Object Recognition},
+  journal = {International Journal of Computer Vision},
+  year = {1998},
+  volume = {26},
+  number = {2},
+  pages = {107--135}
+}
+@article{Barth1993,
+  author = {Barth, E. and Caelli, T. and Zetzsche, C.},
+  title = {Image Encoding, Labeling, and Reconstruction from Differential Geometry},
+  journal = {Graphical Models and Image Processing},
+  year = {1993},
+  volume = {55},
+  number = {6},
+  pages = {428--446}
+}
+@book{Milnor1965,
+  author = {Milnor, J.W.},
+  title = {Topology from the differentiable viewpoint},
+  year = {1965},
+  publisher = {Princeton University Press},
+  address = {Princeton, New Jersey}
+}
+@article{Mirza1993,
+  author = {Mirza, M.J. and Boyer, K.L.},
+  title = {Performance Evaluation of a Class of {M}-Estimators for Surface Parameter Estimation in Noisy Range Data},
+  journal = {IEEE Transactions on Robotics and Automation},
+  year = {1993},
+  volume = {9},
+  number = {1},
+  pages = {75--85},
+  month = {February}
+}
+@article{Brockett1994,
+  author = {Brockett, R. W. and Maragos, P.},
+  title = {Evolution Equations for Continuous-Scale Morphological Filtering},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1994},
+  volume = {42},
+  number = {12},
+  pages = {3377-3386}
+}
+@inproceedings{Brockett1992,
+  author = {Brockett, R. W. and Maragos, P.},
+  title = {Evolution Equations for Continuous-Scale Morphology},
+  year = {1992},
+  volume = {3},
+  pages = {125-128},
+  booktitle = {IEEE International Conference on Acoustics, Speech and Signal Processing}
+}
+@article{Clapp2004,
+  author = {Clapp, A.R. and Medintz, I.L. and Mauro, J.M. and Fisher, B.R. and Bawendi, M.G. and Mattoussi, H.},
+  title = {Fluorescence Resonance Energy Transfer Between Quantum Dot Donors and Dye-Labeled Protein Acceptors},
+  journal = {Journal of the American Chemical Society},
+  year = {2004},
+  volume = {126},
+  pages = {301-310}
+}
+@article{Chen1995,
+  author = {Chen, S. and Haralick, R.M.},
+  title = {Recursive Erosion, Dilation, Opening, and Closing Transforms},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1995},
+  volume = {4},
+  number = {3},
+  pages = {335-346}
+}
+@article{Curtis1987,
+  author = {Curtis, S.R. and Oppenheim, A.V.},
+  title = {Reconstruction of Multidimensional Signals from Zero Crossings},
+  journal = {Journal of the Optical Society of America A},
+  year = {1987},
+  volume = {4},
+  number = {1},
+  pages = {221--231},
+  month = {January}
+}
+@article{Rattey1981,
+  author = {Rattey, P.A. and Lindgren, A.G.},
+  title = {Sampling the 2-{D} {R}adon Transform},
+  journal = {IEEE Transactions on Acoustics, Speech and Signal Processing},
+  year = {1981},
+  volume = {29},
+  number = {5},
+  pages = {994--1002},
+  month = {October},
+  annote = {key_radon}
+}
+@article{Pluim2003,
+  author = {Pluim, J.P.W. and Maintz, J.B.A. and Viergever, M.A.},
+  title = {Mutual-Information-based registration of medical images: a survey},
+  journal = {IEEE Transactions on Medical Imaging},
+  year = {2003},
+  volume = {22},
+  pages = {986-1004}
+}
+@article{Volkmann2003,
+  author = {Volkmann, N. and Ouyang, G. and Trybus, K.M. and DeRosier, D.J. and Lowey, S. and Hanein, D.},
+  title = {Myosin isoforms show unique conformations in the actin-bound state},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2003},
+  volume = {100},
+  number = {6},
+  pages = {3227-3232}
+}
+@article{Pham2006,
+  author = {Pham, T.Q. and Vliet, L.J. van and Schutte, K.},
+  title = { Robust fusion of irregularly sampled data using adaptive normalized convolution},
+  journal = {EURASIP Journal on Applied Signal Processing},
+  year = {2006},
+  volume = { },
+  pages = {1-12}
+}
+@article{Hoyer2004,
+  author = {Hoyer, W. and Cherny, D.I. and Subramaniam, V. and Jovin, T.M.},
+  title = {Rapid self-assembly of $\alpha$-synuclein observed by in situ atomic force microscopy},
+  journal = {Journal of Molecular Biology},
+  year = {2004},
+  volume = {340},
+  number = {1},
+  pages = {127-139}
+}
+@inproceedings{Pham2005,
+  author = {Pham, T.Q. and Bezuijen, M. and Vliet, L.J. van and Schutte, K. and Luengo Hendriks, C.L.},
+  title = {Performance of optimal registration estimators},
+  year = {2005},
+  volume = {5817},
+  pages = {133-144},
+  month = {March 29-30},
+  editor = {Rahman, Z. and Schowengerdt, R.A. and Reichenbach, S.E.},
+  series = {Proceedings of SPIE Defense \& Security},
+  address = {Orlando, USA},
+  booktitle = {Visual Information Processing XIV}
+}
+@article{Harada2005,
+  author = {Harada, K. and Akashi, T. and Togawa, Y. and Matsuda, T. and Tonomura, A.},
+  title = {Optical system for double-biprism electron holography},
+  journal = {Journal of Electron Microscopy},
+  year = {2005},
+  volume = {54},
+  number = {1},
+  pages = {19-27}
+}
+@inproceedings{Pham2003,
+  author = {Pham, T.Q. and Vliet, L.J. van},
+  title = {Normalized averaging using adaptive applicability functions with applications in image reconstruction from sparsely and randomly sampled data},
+  year = {2003},
+  pages = {485-492},
+  month = {June 29 -July 2 },
+  editor = {{Big\"un}, J. and Gustavsson, T. },
+  publisher = {Springer-Verlag },
+  series = {LNCS 2749 },
+  address = {Berlin},
+  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden) }
+}
+@article{Scharcanski2000,
+  author = {Scharcanski, J. and Dodson, C.T.J.},
+  title = {Stochastic Texture Image Estimators for Local Spatial Anisotropy and Its Variability},
+  journal = {IEEE Transactions on Instrumentation and Measurement},
+  year = {2000},
+  volume = {49},
+  number = {5},
+  pages = {971--979},
+  month = {October}
+}
+@article{Ballard1983,
+  author = {Ballard, D.H. and Sabbah, D.},
+  title = {Viewer Independent Shape Recognition},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1983},
+  volume = {5},
+  number = {6},
+  pages = {653--660},
+  annote = {key_radon}
+}
+@incollection{Alvarez1994,
+  author = {Alvarez, L. and Morel, J.-M.},
+  title = {Morphological Approach to Multi-scale Analysis: From Principles to Equations},
+  year = {1994},
+  editor = {Viergever, M. A.},
+  publisher = {Kluwer Academic Publishers},
+  address = {Dordrecht},
+  booktitle = {Geometry-Driven Diffusion in Computer Vision}
+}
+@inproceedings{Diehl1989,
+  author = {Diehl, N. and Burkhardt, H.},
+  title = {Planar motion estimation with a fast converging algorithm},
+  year = {1989},
+  pages = {1099--1102},
+  address = {Paris, France},
+  booktitle = {Proc. 8th Int. Conf. Pattern Recognition, ICPR'86}
+}
+@article{Dirks1999,
+  author = {Dirks, R.W. and Hattinger, C.M. and Molenaar, C. and Snaar, S.P.},
+  title = {Synthesis, processing, and transport of {RNA} within the three-dimensional context of the cell nucleus},
+  journal = {Crit Rev Eukaryot Gene Expr},
+  year = {1999},
+  volume = {9},
+  number = {3-4},
+  pages = {191-201}
+}
+@phdthesis{Kirchgessner2003,
+  author = {Kirchgessner, N.},
+  title = {Extraktion Physiologischer Koordinatensysteme von Pflanzenwurzeln und {-Bl\"attern} aus Bildsequenzen},
+  year = {2003},
+  month = {April},
+  address = {Heidelberg, Germany},
+  school = {Ruprechts-Karls-{Universit\"at} University}
+}
+@article{Vandergheynst2002,
+  author = {Vandergheynst, P. and Gobbers, J.-F.},
+  title = {Directional Dyadic Wavelet Transforms: Design and Algorithms},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2002},
+  volume = {11},
+  number = {4},
+  pages = {363--372},
+  month = {April}
+}
+@article{Meyer2002,
+  author = {Meyer, R.R. and Kirkland, A.I. and Saxton, W.O.},
+  title = {A new method for the determination of the wave aberration function for high resolution {TEM} {1. Measurement} of the symmetric aberrations},
+  journal = {Ultramicroscopy},
+  year = {2002},
+  volume = {92},
+  pages = {89-109}
+}
+@article{Kubitscheck2000,
+  author = {Kubitscheck, U. and {K\"uckmann}, O. and Kues, T. and Peters, R.},
+  title = {Imaging and Tracking of Single {GFP} Molecules in Solution},
+  journal = {Biophysical Journal},
+  year = {2000},
+  volume = {78},
+  pages = {2170-2179},
+  month = {April}
+}
+@inproceedings{Harris1988,
+  author = {Harris, C. and Stephens, M.},
+  title = {A Combined Corner and Edge Detector},
+  year = {1988},
+  pages = {147--151},
+  month = {31 August--2 September},
+  booktitle = {Proceedings of the fourth Alvey Vision Conference},
+  organization = {University of Manchester}
+}
+@inproceedings{Harris1987,
+  author = {Harris, C.G.},
+  title = {Determination of Ego-Motion from Matched Points},
+  year = {1987},
+  booktitle = {Proceedings of the Alvey Vision Conference},
+  annote = {Not in collection}
+}
+@article{Muller2001,
+  author = {Muller, D.A. and Grazul, J.},
+  title = {Optimizing the environment for sub-0.2 nm scanning transmission electron microscopy},
+  journal = {Journal of Electron Microscopy},
+  year = {2001},
+  volume = {50},
+  number = {3},
+  pages = {219-226}
+}
+@misc{Mathematica,
+  author = {Wolfram Research},
+  title = {Mathematica 4},
+  year = {1998},
+  note = {{\tt www.wolfram.com}}
+}
+@article{Leis2006,
+  author = {Leis, A.P. and Beck, M. and Gruska, M. and Best, C. and Hegerl, R. and Baumeister, W. and Leis, J.W.},
+  title = {The essential role of digital signal processing in automated tomography},
+  journal = {IEEE Signal Processing Magazine},
+  year = {2006},
+  volume = {23},
+  number = {3},
+  pages = {95-103}
+}
+@article{Kube1996,
+  author = {Kube, P. and Perona, P.},
+  title = {Scale-space Properties of Quadratic Feature Detectors},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1996},
+  volume = {18},
+  number = {10},
+  pages = {987--999},
+  month = {October}
+}
+@article{Bluestein1970,
+  author = {Bluestein, L.I.},
+  title = {A Linear Filtering Approach to the Computation of Discrete {Fourier} Transform},
+  journal = {IEEE Transactions on Audio and Electroacoustics},
+  year = {1970},
+  volume = {18},
+  number = {4},
+  pages = {451--455},
+  month = {December},
+  annote = {key_fft}
+}
+@article{Danielsson1980,
+  author = {Danielsson, P.-E.},
+  title = {Euclidean Distance Mapping},
+  journal = {Computer Graphics and Image Processing},
+  year = {1980},
+  volume = {14},
+  pages = {227--248}
+}
+@article{Molenaar2003a,
+  author = {Molenaar, C. and Wiesmeijer, K. and Verwoerd, N.P. and Khazen, S. and Eils, R. and Tanke, H.J. and Dirks, R.W.},
+  title = {Visualizing telomere dynamics in living mammalian cells using {PNA} probes},
+  journal = {The EMBO Journal},
+  year = {2003},
+  volume = {22},
+  number = {24},
+  pages = {6631-6641}
+}
+@article{Rieger2004d,
+  author = {Rieger, B. and Dietrich, H.R.C. and Doel, L.R. van den and Vliet, L.J. van},
+  title = {Diffusion of microspheres in sealed and open microarrays},
+  journal = {Microscopy Research and Technique},
+  year = {2004},
+  volume = {65},
+  number = {3},
+  pages = {218-225}
+}
+@phdthesis{Rieger2004a,
+  author = {Rieger, B.},
+  title = {Structure from Motion in nD Image Analysis},
+  year = {2004},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology},
+  note = {digital version available:\\\ {\small\tt http://www.ph.tn.tudelft.nl/Publications/PHDTheses/BRieger/thesis_rieger.html}}
+}
+@misc{Krivanek2003,
+  author = {Krivanek, O.L. and Dellby, N. and Lupini, A.R.},
+  title = {Autoadjusting charged-particle probe-forming apparatus},
+  year = {2003},
+  howpublished = {US6552340}
+}
+@article{Royer2000,
+  author = {Royer, W.E. Jr. and Strand, K. and Heel, M. van and Hendrickson, W.A. },
+  title = {Structural hierarchy in erythrocruorin, the giant respiratory assemblage of annelids},
+  journal = {Biochemistry},
+  year = {2000},
+  volume = {97},
+  pages = {7107-7111}
+}
+@article{Rieger2004b,
+  author = {Rieger, B. and Timmermans, F.J. and Vliet, L.J. van and Verbeek, P.W.},
+  title = {On curvature estimation of iso-surfaces in 3D gray-value images and the computation of shape descriptors},
+  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
+  year = {2004},
+  volume = {26},
+  number = {8},
+  pages = {1088-1094}
+}
+@article{Desbat1993,
+  author = {Desbat, L.},
+  title = {Efficient Sampling on Coarse Grids in Tomography},
+  journal = {Inverse Problems},
+  year = {1993},
+  volume = {9},
+  pages = {251--269},
+  annote = {key_radon}
+}
+@article{Goldman2002,
+  author = {Goldmann, E.},
+  title = {A new window on the cell's inner workings},
+  journal = {Science},
+  year = {2002},
+  volume = {298},
+  pages = {1155-1156}
+}
+@misc{WeickertYYYY,
+  author = {Weickert, J. and Ishikawa, S. and Imiya, A.},
+  title = {On the History of Gaussian Scale-Space Axiomatics},
+  annote = {Chapter 4 from something}
+}
+@article{DorphPetersen2000,
+  author = {Dorph-Petersen, K.-A. and Gundersen, H.J.G. and Jensen, E.B.V.},
+  title = {Non-Uniform Systematic Sampling in Stereology},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {200, Pt 2},
+  pages = {148--157},
+  month = {November}
+}
+@article{Fernandez1997,
+  author = {Feranandez, J.J. and Sanjurjo, J.R. and Carazo, J.-M.},
+  title = {A spectral estimation approach to contrast transfer function detection in electron microscopy},
+  journal = {Ultramicroscopy},
+  year = {1997},
+  volume = {68},
+  pages = {267-295}
+}
+@inproceedings{Bakker2001a,
+  author = {Bakker, P. and Verbeek, P.W. and Vliet, L.J. van},
+  title = {Analysis and detection of 3-D curvilinear structures},
+  year = {2001},
+  pages = {35--40},
+  month = {May 30-june 1},
+  editor = {Vliet, L.J. van and Heijnsdijk, J.W.K. and Kielmann, T. and Knijnenburg, P.M.W.},
+  booktitle = {ASCI'01 (Heijen, The Netherlands)},
+  organization = {ASCI}
+}
+@article{Rodrigo2004,
+  author = {Rodrigo, P.J. and Daria, V.R. and {Gl\"uckstad}, J.},
+  title = {Real-time interactive optical micromanipulation of a mixture of high- and low-index particles},
+  journal = {Optics Express},
+  year = {2004},
+  volume = {12},
+  number = {7},
+  pages = {1417-1425}
+}
+@unpublished{Verbeek2001a,
+  author = {Verbeek, P.W.},
+  title = {Continuous Cube to Cube Mappings as Analytic 3{D} Look-up Tables for {RGB} Color Rendering}
+}
+@article{Rodrigo2005,
+  author = {Rodrigo, P.J. and Daria, V.R. and {Gl\"uckstad}, J.},
+  title = {Four-dimensional optical manipulation of colloidal particles},
+  journal = {Applied Physics Letters},
+  year = {2005},
+  volume = {86},
+  number = {7},
+  pages = {074103}
+}
+@inproceedings{Niblack1988,
+  author = {Niblack, W. and Petkovic, D.},
+  title = {On Improving the Accuracy of the {H}ough Transform: Theory, Simulations, and Experiments},
+  year = {1988},
+  pages = {574--579},
+  month = {June},
+  booktitle = {Proceedings of the IEEE Computer Society Conference CVPR (Ann-Arbor)},
+  annote = {key_radon}
+}
+@article{Gautier2001,
+  author = {Gautier, I. and Tramier, C. and Coppey, J. and Pansu, R.B. and Nicolas, J-C. and Kemnitz, K. and Coppey-Moisan, M.},
+  title = {Homo-{FRET} Microscopy in Living Cells to Measure Monomer-Dimer Transition of {GFP}-Tagged Proteins},
+  journal = {Biophysical Journal},
+  year = {2001},
+  volume = {80},
+  number = {6},
+  pages = {3000-3008}
+}
+@inproceedings{Nystrom2001,
+  author = {{Nystr\"om}, I. and Sanniti di Baja, G. and Svensson, S.},
+  title = {Curve Skeletonization by Junction Detection in Surface Skeletons},
+  year = {2001},
+  volume = {2059},
+  pages = {229--238},
+  editor = {Arcelli, C. and Cordella, L.P. and Sanniti di Baja, G.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  booktitle = {IWVF4, 4th International Workshop on Visual Form}
+}
+@article{Cianci2004,
+  author = {Cianci, G.C. and Wu, J. and Berland, K.M.},
+  title = {Saturation Modified Point Spread Functions in Two-Photon Microscopy},
+  journal = {Microscopy Research and Technique},
+  year = {2004},
+  volume = {64},
+  number = {2},
+  pages = {135-141}
+}
+@article{Good1971,
+  author = {Good, I.J.},
+  title = {The Relationship Between two Fast {Fourier} Transforms},
+  journal = {IEEE Transactions on Computers},
+  year = {1971},
+  volume = {C-20},
+  number = {3},
+  pages = {310--317},
+  month = {March},
+  annote = {key_fft}
+}
+@manual{Ieee1987,
+  author = {IEEE},
+  title = {{IEEE} Standard for Radix-Independent Floating-Point Arithmetic},
+  year = {1987},
+  address = {Technical Committee on Microprocessors and Microcomputers of the {IEEE} Computer Society},
+  note = {Std. 854-1987}
+}
+@book{Spivak1979,
+  author = {M. Spivak},
+  title = {A Comprehensive Introduction to Differential Geometry},
+  year = {1979},
+  volume = {2},
+  publisher = {Publish or Perish},
+  address = {Berkley}
+}
+@inproceedings{Paeth1986,
+  author = {Paeth, A.W.},
+  title = {A Fast Algorithm for General Raster Rotation},
+  year = {1986},
+  pages = {77--81},
+  editor = {Green, M.},
+  booktitle = {Graphics Interface '86}
+}
+@article{Dong1998,
+  author = {Dong, X.F. and Natarajan, P. and Tihova, M. and Johnson, J.E. and Schneemann, A.},
+  title = {Particle Polymorphism Caused by Deletion of a Peptide Molecular Switch in a Quasiequivalent Icosahedral Virus},
+  journal = {Ultramicroscopy},
+  year = {Journal of Virology},
+  volume = {72},
+  pages = {6024-6033}
+}
+@phdthesis{Barman1991,
+  author = {{B\aa rman}, H.},
+  title = {Hierarchical Curvature Estimation in Computer Vision},
+  year = {1991},
+  school = {{Link\"oping} University, Sweden}
+}
+@article{Zetzsche1991,
+  author = {Zetzsche, C. and Barth, E.},
+  title = {Direct detection of flow discontinuities by 3D curvature operators},
+  journal = {Pattern Recognition Letters},
+  year = {1991},
+  volume = {12},
+  pages = {771--779}
+}
+@inproceedings{Barman1990,
+  author = {{B\aa rman}, H. and Granlund, G. H. and Knutsson, H.},
+  title = {Estimation of Curvature in 3-{D} Images Using Tensor Field Filtering},
+  year = {1990},
+  pages = {563--565},
+  editor = {O. Faugeras},
+  publisher = {Springer-Verlag},
+  booktitle = {Computer Vision -- ECCV90. Proceedings, 1990}
+}
+@article{Minkowski1903,
+  author = {Minkowski, H.},
+  title = {Volumen und {Oberfl\"achen}},
+  journal = {Mathematische Annalen},
+  year = {1903},
+  pages = {447--495}
+}
+@book{Foley1996,
+  author = {Foley, J.D. and Dam, A. van and Feiner, S.K. and Hughes, J.F.},
+  title = {Computer graphics, principles and practice},
+  year = {1996},
+  publisher = {Addison-Wesley},
+  address = {London},
+  edition = {2}
+}
+@book{Boyce1986,
+  author = {Boyce, W.E. and DiPrima, R.C.},
+  title = {Elementary differential equations and boundary value problems},
+  year = {1986},
+  publisher = {John Wiley \& sons},
+  edition = {fourth}
+}
+@article{Cranage1988,
+  author = {Cranage, R.W. and Tofts, P.S.},
+  title = {Ring Artifacts in {X}-Ray Computed Tomography},
+  journal = {British Journal of Radiology},
+  year = {1988},
+  volume = {61},
+  number = {726},
+  pages = {529--529}
+}
+@inproceedings{Luengo2001,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Segmentation-Free Estimation of Length Distributions Using Sieves and RIA Morphology},
+  year = {2001},
+  volume = {2106},
+  pages = {389--406},
+  editor = {Kerckhove, M.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Vancouver, Canada},
+  booktitle = {Proc. Third International Conference on Scale-Space}
+}
+@article{Hillyard1993,
+  author = {Hillyard, J. and Silcox, J.},
+  title = {Thickness effects in {ADF STEM} zone axis images},
+  journal = {Ultramicroscopy},
+  year = {1993},
+  volume = {52},
+  pages = {325-334 }
+}
+@phdthesis{Aronsson2002,
+  author = {Aronsson, M.},
+  title = {On 3D Fibre Measurement of Digitized Paper},
+  year = {2002},
+  address = {Uppsala, Sweden},
+  school = {Swedish University of Agricultural Science}
+}
+@inbook{Berkner1995,
+  author = {Berkner, K. and Evertsz, C.J.G. and Berghorn, W.},
+  title = {Visualisierung - Dynamik und {Komplexit\"at}},
+  year = {1995},
+  publisher = {Tagungsband Bremen},
+  chapter = {Eine lokale Charakterisierung von Kanten basierend auf Skalierungseigenschaften von Wavelet-Transformation}
+}
+@article{Martens1997,
+  author = {Martens, J.B.},
+  title = {Local Orientation Analysis in Images by Means of the Hermite Transform},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1997},
+  volume = {6},
+  number = {8},
+  pages = {1103--1116},
+  month = {August}
+}
+@inproceedings{Wheeler2000,
+  author = {Wheeler, M. and Zmuda, M. A.},
+  title = {Processing Color and Complex Data using Mathematical Morphology},
+  year = {2000},
+  volume = {1},
+  pages = {618-624},
+  address = {Berlin},
+  booktitle = {Proceedings of the IEEE, National Aerospace and Electronics Conference}
+}
+@article{Svensson2002,
+  author = {Svensson, S. and Borgefors, G.},
+  title = {Distance transforms in 3D using four different weights},
+  journal = {Pattern Recognition Letters},
+  year = {2002},
+  volume = {23},
+  pages = {1407--1418}
+}
+@article{Mattheyses2004,
+  author = {Mattheyses, A.L. and Hoppe, A.D. and Axelrod, D.},
+  title = {Polarized Fluorescence Resonance Energy Transfer Microscopy},
+  journal = {Biophysical Journal},
+  year = {2004},
+  volume = {87},
+  number = {4},
+  pages = {2787-2797}
+}
+@phdthesis{Verveer1998b,
+  author = {Verveer, P.J.},
+  title = {Computational and Optical Methods for Improving Resolution and Signal Quality in Fluorescence Microscopy},
+  year = {1998},
+  address = {Delft, The Netherlands},
+  school = {Technische Universiteit Delft},
+  type = {Thesis}
+}
+@inproceedings{Illers2004a,
+  author = {Illers, H. and Broucke, D. van den and Buhr, E.},
+  title = {Measurement of correlated noise in images of computed radiography systems and its influence on the detective quantum efficiency},
+  year = {2004},
+  address = {San Diego, California, USA},
+  booktitle = {Proceedings of SPIE}
+}
+@article{Verveer1998a,
+  author = {Verveer, P.J. and Jovin, T.M.},
+  title = {Improved Restoration from Multiple Images of a Single Object: Application to Fluorescence Microscopy},
+  journal = {Applied Optics},
+  year = {1998},
+  volume = {37},
+  number = {26},
+  pages = {6240-6239}
+}
+@book{Serra1988,
+  title = {Image Analysis and Mathematical Morphology, Volume 2: Theoretical Advances},
+  year = {1988},
+  editor = {Serra, J.},
+  publisher = {Academic Press},
+  address = {London}
+}
+@article{Chen2000,
+  author = {Chen, J. and Sato, Y. and Tamura, S.},
+  title = {Orientation Space Filtering for Multiple Orientation Line Segmentation},
+  journal = {Pattern Analysis and Machine Intelligence},
+  year = {2000},
+  volume = {22},
+  number = {5},
+  pages = {417--429},
+  month = {May}
+}
+@article{Hestenes1994a,
+  author = {Hestenes, D.},
+  title = {Invariant Body Kinematics: {II}. Reaching and Neurogeometry},
+  journal = {Neural Networks},
+  year = {1994},
+  volume = {7},
+  number = {1},
+  pages = {79--88}
+}
+@article{Zemlin2002,
+  author = {Zemlin, J. and Zemlin, F.},
+  title = {Diffractogram tableaux by mouse click},
+  journal = {Ultramicroscopy},
+  year = {2002},
+  volume = {93},
+  pages = {77-82}
+}
+@inproceedings{Papoulis1976,
+  author = {Papoulis, A.},
+  title = {Topics in Signal Analysis},
+  year = {1976},
+  pages = {247--249},
+  month = {August},
+  address = {Patras, Greece},
+  booktitle = {International Conference on Information Sciences and Systems}
+}
+@techreport{Calway1991,
+  author = {Calway, A.},
+  title = {Incorporating Orientation Selectivity in Wavelet Transforms for Multiresolution {Fourier} Analysis of Images},
+  year = {1991},
+  month = {September},
+  institution = {{Link\"oping University}},
+  note = {LiTH-ISY-I-1243}
+}
+@article{Esa2000,
+  author = {Esa, A. and Edelmann, P. and Kreth, G. and Trakhtenbrot, L. and Amariglio, N. and Rechavi, G. and Hausmann, M. and Cremer, C.},
+  title = {Three-dimensional spectral precision distance microscopy of chromatin nanostructures after triple-colour {DNA} labelling: a study of the {BCR} region on chromosome 22 and the {Philadelphia} chromosome},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {199},
+  number = {2},
+  pages = {96-105}
+}
+@article{Greenspan1992,
+  author = {Greenspan, H. and Porat, M. and Zeevi, Y.Y.},
+  title = {Projection-based Approach to Image Analysis: Pattern Recognition and Representation in the Position-Orientation Space},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1992},
+  volume = {14},
+  number = {11},
+  pages = {1105--1110},
+  month = {November}
+}
+@article{Nakagawa1978,
+  author = {Nakagawa, Y. and Rosenfeld, A.},
+  title = {A Note on the Use of Local Min and Max Operations in Digital Picture Processing},
+  journal = {IEEE Transactions on Systems, Man and Cybernetics},
+  year = {1978},
+  volume = {8},
+  number = {8},
+  pages = {3}
+}
+@article{Lenz1987,
+  author = {Lenz, R.},
+  title = {Optimal Filters for the Detection of Linear Patterns in 2-{D} and Higher Dimensional Images},
+  journal = {Pattern Recognition},
+  year = {1987},
+  volume = {20},
+  number = {2},
+  pages = {163--172}
+}
+@book{Oppenheim1983,
+  author = {Oppenheim, A.V. and Willsky, A.S. and Young, I.T.},
+  title = {Signals and Systems},
+  year = {1983},
+  publisher = {Prentice-Hall International},
+  address = {London}
+}
+@article{Abels2005,
+  author = {Abels, J.A. and Moreno-Herreo, F. and Heijden, T. van der and Dekker, C. and Dekker, N.H.},
+  title = {Single-Molecule Measurements of the Persistence Length of Double-Stranded {RNA}},
+  journal = {Biophysical Journal},
+  year = {2005},
+  volume = {88},
+  pages = {2737-2744}
+}
+@inproceedings{Breton1996kort,
+  author = {Breton, P. and Zucker, S.W. },
+  title = {Shadows and Shading Flow Fields },
+  year = {1996},
+  pages = {782--789},
+  booktitle = {CVPR'96 }
+}
+@book{Tukey1977,
+  author = {Tukey, J. W.},
+  title = {Exploratory Data Analysis},
+  year = {1977},
+  publisher = {Addison-Wesley},
+  address = {Reading, Massachusetts}
+}
+@article{Rotem1986,
+  author = {Rotem, D. and Zeevi, Y.Y.},
+  title = {Image Reconstruction from Zero Crossings},
+  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
+  year = {1986},
+  volume = {34},
+  number = {5},
+  pages = {1269--1277},
+  month = {October}
+}
+@article{Vigneau2000,
+  author = {Vigneau, E. and Loisel, C. and Devaux, M.F. and Cantoni, P.},
+  title = {Number of Particles for the Determination of Size Distribution from Microscopic Images},
+  journal = {Powder Technology},
+  year = {2000},
+  volume = {107},
+  pages = {243--250}
+}
+@article{Ammouche2001,
+  author = {Ammouche, A. and Riss, J. and Breysse, D. and Marchand, J.},
+  title = {Image Analysis for the Automated Study of Microcracks in Concrete},
+  journal = {Cement \& Concrete Composites},
+  year = {2001},
+  volume = {23},
+  pages = {267--278}
+}
+@article{Vincent1991,
+  author = {Vincent, L. and Soille, P.},
+  title = {Watersheds in Digital Spaces: An Efficient Algorithm Based on Immersion Simulations},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1991},
+  volume = {13},
+  number = {6},
+  pages = {583--598},
+  month = {June}
+}
+@unpublished{Verbeek2002,
+  author = {Verbeek, P.W.},
+  title = {De Relatie van {L}arkin, {B}one and {O}ldfield (2001) en Felsberg en Sommer (2001) met het vectorgradient verhaal (PWV, submitted to ICPR2002)}
+}
+@article{Vincent1993,
+  author = {Vincent, L.},
+  title = {Morphological Grayscale Reconstruction in Image Analysis: Applications and Efficient Algorithms},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1993},
+  volume = {2},
+  number = {2},
+  pages = {176--201},
+  month = {April}
+}
+@article{Gadella1997,
+  author = {Gadella, T.W.J. jr. and Jovin, T.M.},
+  title = {Fast algorithms for the analysis of single and double exponential decay curves with a background term. Application to time-resolved imaging microscopy},
+  journal = {Bioimaging},
+  year = {1997},
+  volume = {5},
+  number = {1},
+  pages = {19-39}
+}
+@article{Gadella1995,
+  author = {Gadella, T.W.J. jr. and Jovin, T.M.},
+  title = {Oligomerization of Epidermal Growth Factor Receptors on {A431} Cells Studied by Time-resolved Fluorescence Imaging Microscopy. {A} Stereochemical Model for Tyrosine Kinase Receptor Activation},
+  journal = {Journal of Cell Biology},
+  year = {1995},
+  volume = {129},
+  number = {6},
+  pages = {1543-1558}
+}
+@book{Matheron1975,
+  author = {Matheron, G.},
+  title = {Random Sets and Integral Geometry},
+  year = {1975},
+  publisher = {Wiley},
+  address = {New York}
+}
+@book{Weisstein1999,
+  author = {Weisstein, E.W.},
+  title = {Concise Encyclopedia of Mathematics},
+  year = {1999},
+  publisher = {CRC}
+}
+@article{Gadella1994,
+  author = {Gadella, T.W.J. jr. and Clegg, R.M. and Jovin, T.M.},
+  title = {Fluorescence lifetime imaging microscopy: Pixel-by-pixel analysis of phase-modulation data},
+  journal = {Bioimaging},
+  year = {1994},
+  volume = {2},
+  number = {3},
+  pages = {139-159}
+}
+@article{Kratky1949,
+  author = {Kratky, O. and Porod, G.},
+  title = {{R\"ontgenuntersuchungen gel\"oster Fadenmolek\"ule}},
+  journal = {Rec. Trav. Chim. Pays-Bas Belg},
+  year = {1949},
+  volume = {68},
+  pages = {1106-1124}
+}
+@article{Maragos1996,
+  author = {Maragos, Petros},
+  title = {Differential Morphology and Image Processing},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1996},
+  volume = {5},
+  number = {6},
+  pages = {922-937}
+}
+@inproceedings{Leavers2000,
+  author = {Leavers, V.F.},
+  title = {Analysis of Wear Particles Using the Radon Transform},
+  year = {2000},
+  pages = {764--766},
+  month = {September 3-7},
+  editor = {Sanfeliu, A. and Villanueva, J.J. and Vanrell, M. and Alquezar, R. and Huang, T. and Serra, J. },
+  publisher = {IEEE Computer Society Press, Los Alamitos },
+  booktitle = {ICPR15, Proc. 15th Int. Conference on Pattern Recognition (Barcelona, Spain)},
+  annote = {key_radon}
+}
+@article{Cosgriff2005,
+  author = {Cosgriff, E.C. and Oxley, M.P. and Allen, L.J. and Pennycock, S.J.},
+  title = {The spatial resolution of imaging using core-loss spectroscopy in the scanning transmission electron microscope},
+  journal = {Ultramicroscopy},
+  year = {2005},
+  volume = {102},
+  pages = {317-326}
+}
+@phdthesis{Freeman1992,
+  author = {Freeman, W.T.},
+  title = {Steerable Filters and Local Analysis of Image Structure},
+  year = {1992},
+  school = {Massachusetts Institute of Technology}
+}
+@article{Freeman1991,
+  author = {Freeman, W.T. and Adelson, E.H.},
+  title = {The Design and Use of Steerable Filters},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1991},
+  volume = {13},
+  number = {9},
+  pages = {891--906},
+  month = {September}
+}
+@inproceedings{Lindeberg1993a,
+  author = {Lindeberg, T.},
+  title = {On Scale Selection for Differential Operators},
+  year = {1993},
+  pages = {857--866},
+  month = {May},
+  booktitle = {Proc. 8th Scandinavian Conference on Image Analysis ({Troms\o} Norway)}
+}
+@inproceedings{Lindeberg1993b,
+  author = {Lindeberg, T. and {G\aa rding}, J.},
+  title = {Shape from texture from a multi-scale perspective},
+  year = {1993},
+  address = {Berlin, Germany},
+  booktitle = {Proceeding of the 4th International Conference on Computer Vision}
+}
+@misc{DIPimage,
+  author = {Luengo Hendriks, C.L. and Rieger, B. and Ginkel, M. van and Kempen, G.M.P. van and Vliet, L.J. van},
+  title = {{DIPimage}: a scientific image processing toolbox for {MATLAB}},
+  year = {1999-},
+  note = {Delft University of Technology, {\tt http://www.qi.tnw.tudelft.nl/DIPlib}}
+}
+@inproceedings{Yu1998,
+  author = {Yu, W. and Daniilidis, K. and Sommer, G.},
+  title = {Rotated Wedge Averaging Method for Junction Characterization},
+  year = {1998},
+  pages = {390--395},
+  month = {June 23-25},
+  booktitle = {Proc. Computer Society Conference on Computer Vision and Pattern Recognition, CVPR'98, Santa Barbara, USA}
+}
+@book{Klotzek,
+  author = {Benno Klotzek},
+  title = {{Einf\"uhrung} in die Differentialgeometrie},
+  year = {1994},
+  publisher = {Verlag Harri Deutsch},
+  address = {Thun, Frankfurt am Main}
+}
+@article{Sprague2005,
+  author = {Sprague, B.L. and McNally, J.G.},
+  title = {{FRAP} analysis of binding: proper and fitting},
+  journal = {Trends in Cell Biology},
+  year = {2005},
+  volume = {15},
+  number = {2},
+  pages = {84-91}
+}
+@article{Maragos1994,
+  author = {Maragos, Petros},
+  title = {Morphological Systems: Slope Transforms and Max-Min Difference and Differential Equations},
+  journal = {Signal Processing},
+  year = {1994},
+  volume = {38},
+  number = {1},
+  pages = {57-77}
+}
+@article{Sprague2004,
+  author = {Sprague, B.L. and Pego, R.L. and Stavreva, D.A. and McNally, J.G.},
+  title = {Analysis of Binding Reactions by Fluorescence Recovery after Photobleaching},
+  journal = {Biophysical Journal},
+  year = {2004},
+  volume = {86},
+  pages = {3473-3495},
+  month = {June}
+}
+@phdthesis{Westerweel1993,
+  author = {Westerweel, J.},
+  title = {Digital particle image velocimetry - theory and application},
+  year = {1993},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Marek2005,
+  author = {Marek, J. and Demj\'enov\'a and Tomori, Z. and Jan\'a\v{c}ek, J. and Zolotov\'a, I. and Valle, F. and Farve, M. and Dietler, G.},
+  title = {Interactive Measurement and Characterization of {DNA} Molecules by Analysis of {AFM} Images},
+  journal = {Cytometry Part A},
+  year = {2005},
+  volume = {63},
+  number = {2},
+  pages = {87-93}
+}
+@book{Smith2000,
+  author = {Smith, W.J.},
+  title = {Modern Optical Engenering},
+  year = {2000},
+  publisher = {McGraw-Hill},
+  address = {New York},
+  edition = {thrid}
+}
+@article{Nirmal1996,
+  author = {Nirmal, M. and Dabbausi, B.O. and Bawendi, M.G. and Macklin, J.J. and Trautman, J.K. and Harris, T.D. and Brus, L.E.},
+  title = {Fluorescience intermittency in single cadmium selenide nanocrystals},
+  journal = {Nature},
+  year = {1996},
+  volume = {383},
+  number = {6603},
+  pages = {802-805}
+}
+@article{Grillo2006,
+  author = {Grillo, V. and Carlino, E.},
+  title = {A novel method for focus assessment in atomic resolution {STEM HAADF} experiments},
+  journal = {Ultramicrosocpy},
+  year = {2006},
+  volume = {106},
+  pages = {603-613}
+}
+@article{Heine1961,
+  author = {Heine, S. von and Kratky, O. and Porod, G. and Schmitz, P.J.},
+  title = {Eine verfeinerte {Theorie} der {R\"ontgenkleinwinkelstreuung} des {verkn\"auelten} {Fadenmolek\"uls} und ihre {Anwendung} auf {Cellulosenitrat} in {L\"o}sung},
+  journal = {Macromolecular Chemistry and Physics},
+  year = {1961},
+  volume = {44},
+  number = {1},
+  pages = {682-726}
+}
+@incollection{Hilditch1969,
+  author = {Hilditch, C.J.},
+  title = {Linear skeletons from square cupboards},
+  year = {1969},
+  pages = {404--420},
+  editor = {{Meltzer B. and Mitchie D.}},
+  publisher = {University Press Edinburgh},
+  booktitle = {Machine Intelligence}
+}
+@article{Subramaniam2003,
+  author = {Subramaniam, V. and Hanley, Q.S. and Clayton, A.H.A. and Jovin, T.M.},
+  title = {Photophysics of green and red fluorescent proteins: some implications for quantitative microscopy},
+  journal = {Methods in Enzymology.},
+  year = {2003},
+  volume = {360},
+  pages = {178-201}
+}
+@article{Brink1998a,
+  author = {Brink, J. and Sherman, M.B. and Berrniman, J. and Chiu, W.},
+  title = {Evaluation of charing on macromolecules in electron mircoscopy},
+  journal = {Ultamicroscopy},
+  year = {1998},
+  volume = {72},
+  pages = {41-52}
+}
+@inproceedings{Ginkel1997,
+  author = {Ginkel, M. van and Verbeek, P.W. and Vliet, L.J. van},
+  title = {Orientation Selectivity for Orientation Estimation},
+  year = {1997},
+  volume = {I},
+  pages = {533--537},
+  month = {June 9-11},
+  booktitle = {Proceedings of the 10th Scandinavian Conference on Image Analysis (Lappeenranta, Finland)}
+}
+@mastersthesis{Ginkel1995,
+  author = {Ginkel, M. van},
+  title = {Diffusion Generated Scale-space for Blob Analysis},
+  year = {1995},
+  month = {August},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology}
+}
+@inproceedings{Ginkel1998,
+  author = {Ginkel, M. van and Verbeek, P.W. and van Vliet, L.J.},
+  title = {Curvature Estimation for Overlapping Curved Patterns using Orientation Space},
+  year = {1998},
+  pages = {173--178},
+  month = {June 9-11},
+  editor = {Haar Romeny, B. ter and Epema, D.H.J. and Tonino, J.F.M.},
+  booktitle = {Proceedings of the third annual conference of the Advanced School for Computing and Imaging (Lommel, Belgium)}
+}
+@inproceedings{Ginkel1999,
+  author = {Ginkel, M. van and Weijer, J. van de and Verbeek, P.W. and Vliet, L.J. van},
+  title = {Curvature Estimation from Orientation Fields},
+  year = {1999},
+  pages = {545--551},
+  month = {June 7-11},
+  editor = {Ersboll, B.K. and Johansen, P.},
+  booktitle = {SCIA'99, Proc. 11th Scandinavian Conference on Image Analysis (Kangerlussuaq, Greenland)},
+  organization = {Pattern Recognition Society of Denmark, Lyngby}
+}
+@inproceedings{Bakker1999a,
+  author = {Bakker, P. and Verbeek, P.W. and Vliet, L.J. van},
+  title = {Edge preserving orientation adaptive filtering},
+  year = {1999},
+  pages = {207--213},
+  editor = {Boasson, M. and Kaandorp, J.A. and Tonino, J.F.M. and Vosselman, M.G.},
+  booktitle = {ASCI'99, Proc. 5th Annual Conference of the Advanced School for C omputing and Imaging (Heijen, The Netherlands)},
+  organization = {ASCI, Delft}
+}
+@article{Mecke1996,
+  author = {Mecke, K.R.},
+  title = {Morphological Characterization of Patterns in Reaction-Diffusion Systems},
+  journal = {Physical Review {E}},
+  year = {1996},
+  volume = {53},
+  number = {5},
+  pages = {4794--4800},
+  month = {May}
+}
+@article{Lawton1992,
+  author = {Lawton, W.M.},
+  title = {Multidimensional Chirp Algorithms for Computing {Fourier} Transforms},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1992},
+  volume = {1},
+  number = {3},
+  pages = {429--431},
+  month = {July},
+  annote = {key_fft}
+}
+@article{Pratt1972,
+  author = {Pratt, W.K.},
+  title = {Generalized {Wiener} filtering computation techniques},
+  journal = {IEEE Trans. Comput.},
+  year = {1972},
+  volume = {C-21},
+  pages = {297--303}
+}
+@article{Zhu2004,
+  author = {Zhu, Y. and Carragher, B. and Glaeser, R.M. and Fellmann, D. and Bajaj, C. and Bern, M. and Mouche, F. and Haas, F. de and Hall, R.J. and Kriegman, D.J. and Ludtke, S.J. and Mallick, S.P. and Penczek, P.A. and Roseman, A.M. and Sigworth, F.J. and Volkmann, N. and Potter, C.S.},
+  title = {Automatic particle selection: results of a comparative study},
+  journal = {Journal of Structural Biology},
+  year = {2004},
+  volume = {145},
+  pages = {3-14}
+}
+@article{Breen1996a,
+  author = {Breen, E. J. and Jones, R.},
+  title = {Attribute Openings, Thinnings, and Granulometries},
+  journal = {Computer Vision and Image Understanding},
+  year = {1996},
+  volume = {64},
+  number = {3},
+  pages = {377-389}
+}
+@article{Funaro2003,
+  author = {Funaro, M. and Oja, E. and Valpula, H.},
+  title = {Independent component analysis for artefact separation in astrophysical images},
+  journal = {Neural Networks},
+  year = {2003},
+  volume = {16},
+  number = {4},
+  pages = {469-478}
+}
+@article{Lehmann1997,
+  author = {Lehmann, T.M. and Kaser, A. and Repges, R.},
+  title = {A Simple Parametric Equation for Pseudocoloring Grey Scale Images Keeping their Original Brightness Progression},
+  journal = {Image and Vision Computing},
+  year = {1997},
+  volume = {15},
+  pages = {251--257}
+}
+@inproceedings{Michaelis1994,
+  author = {Michaelis, M. and Sommer, G.},
+  title = {Junction Classification by Multiple Orientation Detection},
+  year = {1994},
+  pages = {101--108},
+  month = {May},
+  editor = {Eklundh, Jan-Olof},
+  address = {Stockholm, Sweden},
+  booktitle = {ECCV'94, Third European Conference on Computer Vision}
+}
+@article{Ginneken2000,
+  author = {Ginneken, B. van and Haar Romeny, B.M. ter},
+  title = {Applications of Locally Orderless Images},
+  journal = {Journal of Visual Communication and Image Representation},
+  year = {2000},
+  volume = {11},
+  number = {2},
+  pages = {196--208}
+}
+@article{Michaelis1995,
+  author = {Michaelis, M. and Sommer, G.},
+  title = {A Lie Group Approach to Steerable Filters},
+  journal = {Pattern Recognition Letters},
+  year = {1995},
+  volume = {16},
+  pages = {1165--1174}
+}
+@article{Brink1998,
+  author = {Brink, J. and Gross, H. and Tittmann, P. and Sherman, M.B. and Chiu, W.},
+  title = {Reduction of charging in protein electron cryomicroscopy},
+  journal = {Journal of Microscopy},
+  year = {1998},
+  volume = {191},
+  number = {1},
+  pages = {67-73}
+}
+@article{Cowley1986,
+  author = {Cowley, J.M. and Mankos, M. and Scheinfein, M.R.},
+  title = {Greatly defocused, point-projection, off-axis electron holographyy},
+  journal = {Ultramicroscopy},
+  year = {1966},
+  volume = {63},
+  pages = {133-147}
+}
+@article{Hutchison2005,
+  author = {Hutchison, J.L. and Titchmarsh, J.M. and Cockayne, D.J.H. and Doole, R.C. and Hetherington, C.J.D. and Kirkland, A.I. and Sawada, H.},
+  title = {A versatile double aberration-corrected, energy filtered {HREM/STEM} for materials science},
+  journal = {Ultramicroscopy},
+  year = {2005},
+  volume = {103},
+  pages = {7-15}
+}
+@article{Bergholm1987,
+  author = {Bergholm, F.},
+  title = {Edge Focusing},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1987},
+  volume = {9},
+  number = {6},
+  pages = {726--741},
+  month = {November}
+}
+@article{Axelrod1989,
+  author = {Axelrod, D.},
+  title = {Fluorescence Polarization Microscopy},
+  journal = {Methods in Cell Biology},
+  year = {1989},
+  volume = {30},
+  pages = {333-352}
+}
+@article{Heideman1992,
+  author = {Heideman, M.T.},
+  title = {Computation of an Odd-Length DCT from a Real-Valued DFT of the Same Length},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1992},
+  volume = {40},
+  number = {1},
+  pages = {54--61},
+  month = {January},
+  annote = {key_fft}
+}
+@article{Nagao1979,
+  author = {Nagao, M. and Matsuyama, T.},
+  title = {Edge Preserving Smoothing},
+  journal = {Computer Graphics and Image Processing},
+  year = {1979},
+  volume = {9},
+  pages = {394--407}
+}
+@article{Aguado2000,
+  author = {Aguado, A.S. and Montiel, E. and Nixon, M.S.},
+  title = {Bias Error Analysis of the Generalised {Hough} Transform},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {2000},
+  volume = {12},
+  number = {1},
+  pages = {25--42}
+}
+@article{Lin2000,
+  author = {Lin, C.L. and Miller, J.D.},
+  title = {Pore Structure and network analysis of filter cake},
+  journal = {Chemical Engineering Journal},
+  year = {2000},
+  volume = {80},
+  month = {221-231}
+}
+@phdthesis{Lin2003,
+  author = {Lin, Q.},
+  title = {Enhancement, Extraction, and Visualization of {3D} Volume Data},
+  year = {2003},
+  school = {{Link\"oping University}, Sweden}
+}
+@article{Jackway1996,
+  author = {Jackway, Paul T. and Deriche, Mohamed},
+  title = {Scale-Space Properties of the Multiscale Morphological Dilation-Erosion},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1996},
+  volume = {18},
+  number = {1},
+  pages = {38--51},
+  month = {January}
+}
+@article{Sederberg1984,
+  author = {Sederberg, T.W. and Anderson, D.C. and Goldman, R.N.},
+  title = {Implicit Representation of Parametric Curves and Surfaces},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1984},
+  volume = {28},
+  number = {1},
+  pages = {72--84}
+}
+@article{Jackway1998,
+  author = {Jackway, Paul T.},
+  title = {On the Scale-Space Theorem of Chen and Yan},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {3},
+  pages = {351-352}
+}
+@article{Zimmermann2002,
+  author = {Zimmermann, T. and Rietdorf, J. and Girod, A. and Georget, V. and Pepperkok, R.},
+  title = {Spectral imaging and linear un-mixing enables improved {FRET} effciency with a novel {GFP2-YFP FRET} pair},
+  journal = {FEBS Letters},
+  year = {2002},
+  volume = {531},
+  number = {2},
+  pages = {245-249}
+}
+@article{Zimmermann2003,
+  author = {Zimmermann, T. and Rietdorf, J. and Pepperkok, R.},
+  title = {Spectral imaging and its application in live cell microscopy},
+  journal = {FEBS Letters},
+  year = {2003},
+  volume = {546},
+  number = {1},
+  pages = {87-92}
+}
+@article{Fischl1999,
+  author = {Fischl, B. and Schwartz, E.L.},
+  title = {Adaptive Nonlocal Filtering: A Fast Alternative to Anisotropic Diffusion for Image Enhancement},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1999},
+  volume = {VOL. 21},
+  number = {NO. 1}
+}
+@article{Reed1990,
+  author = {Reed, T.R. and Wechsler, H.},
+  title = {Segmentation of Textured Images and Gestalt Organization Using Spatial/Spatial-Frequency Representations},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1990},
+  volume = {12},
+  number = {1},
+  pages = {1--12},
+  month = {January}
+}
+@article{Reed1999,
+  author = {Reed, M.G. and Howard, C.V.},
+  title = {Stereological Estimation of Covariance using Linear Dipole Probes},
+  journal = {Journal of Microscopy},
+  year = {1999},
+  volume = {195, Pt 2},
+  pages = {96--103},
+  month = {August}
+}
+@article{Hell1994a,
+  author = {Hell, S. W. and Wichmann, J.},
+  title = {Breaking the diffraction limit resolution by stimulated emission: stimulated-emission-depletion microscopy},
+  journal = {Optics Letters},
+  year = {1994},
+  volume = {19},
+  number = {11},
+  pages = {780-783}
+}
+@article{Nicholson2001,
+  author = {Nicholson, W.V. and Glaser, R.M.},
+  title = {Review: Automatic Particle Detection in Electron Microscopy},
+  journal = {Journal of Structural Biology},
+  year = {2001},
+  volume = {133},
+  pages = {90-101}
+}
+@inproceedings{Glas2001,
+  author = {Glas, M. van der and Vos, F.M. and Vossepoel, A.M.},
+  title = {Assessment of Center of Rotation of the Glenohumeral Joint by a Modified {H}ough Transform},
+  year = {2001},
+  volume = {2208},
+  editor = {Niessen, W.J. and Viergever, M.A.},
+  series = {Lecture Notes on Computer Science},
+  booktitle = {4th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001, Utrecht, The Netherlands},
+  annote = {key_radon}
+}
+@article{Danielsson2001,
+  author = {Danielsson, P.-E. and Lin, Q. and Ye, Q.-Z.},
+  title = {Efficient Detection of Second-Degree Variations in {2D} and {3D} Images},
+  journal = {Journal of Visual Communication and Image Representation},
+  year = {2001},
+  volume = {12},
+  pages = {255--305}
+}
+@article{Dirac1927,
+  author = {Dirac, P.},
+  title = {The Physical Interpretation of the Quantum Dynamics},
+  journal = {Proceedings of the Royal Society of London},
+  year = {1927},
+  volume = {A113},
+  pages = {621-641}
+}
+@techreport{Danielsson2000,
+  author = {Danielsson,P.-E. and Lin, Q.},
+  title = {A New Shape Space for Second Order 3D-Variations},
+  year = {2000},
+  month = {October},
+  institution = {{Link\"oping} University, Sweden},
+  note = {LiTH-ISY-R-2299}
+}
+@article{Otten1993,
+  author = {Otten, M.T. and Coene, W.M.J.},
+  title = {High-resolution imaging on a field emission {TEM}},
+  journal = {Ultramicroscopy},
+  year = {1993},
+  volume = {48},
+  pages = {77-91}
+}
+@article{Nelson2006,
+  author = {Nelson, P.C. and Zurla, C. and Brogioli, D. and Beausang, J.F. and Finzi, L. and Dunlap, D.},
+  title = {Tethered Particle Motion as a Diagnostic of {DNA} Tether Length},
+  journal = {Journal of Physical Chemistry B},
+  year = {2006}
+}
+@article{Ballester2001,
+  author = {Ballerster, C. and Bertalmio, M. and Caselles, V. and Sapiro, G. and Verdera, J.},
+  title = {Filling-In by Joint Interpolation of Vector Fields and Gray Levels},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2001},
+  volume = {10},
+  number = {8},
+  pages = {1200--1211},
+  month = {August}
+}
+@inbook{Kohonen1995a,
+  author = {Kohonen, T.},
+  title = {Self-Organizing Maps},
+  year = {1995},
+  volume = {30},
+  publisher = {Springer-Verlag},
+  series = {Springer Series in Information Sciences},
+  chapter = {5.8--5.10}
+}
+@article{Saff1997,
+  author = {Saff, E.B. and Kuijlaars, A.B.J.},
+  title = {Distributing Many Points on a Sphere},
+  journal = {the Mathematical Intelligencer},
+  year = {1997},
+  volume = {19},
+  number = {1},
+  pages = {5--11}
+}
+@article{Johansen2000,
+  author = {Johansen, P. and Nielsen, M. and Olsen, O.F.},
+  title = {Branch Points in One-Dimensional {Gaussian} Scale Space},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {2000},
+  volume = {13},
+  number = {3},
+  pages = {193--203}
+}
+@techreport{Lieshout1997,
+  author = {Lieshout, M.N.M. van},
+  title = {Size Distributions in Stochastic Geometry},
+  year = {1997},
+  institution = {CWI, Amsterdam},
+  note = {PNA-R9715}
+}
+@article{Raven1998,
+  author = {Raven, C.},
+  title = {Numerical Removal of Ring Artefacts in Microtomography},
+  journal = {Review of Scientific Instruments},
+  year = {1998},
+  volume = {69},
+  number = {8},
+  pages = {2978--2980}
+}
+@book{Spivak1965,
+  author = {Spivak, M.},
+  title = {Calculus on Manifolds},
+  year = {1965},
+  publisher = {Perseus Books},
+  address = {Cambridge, MA}
+}
+@article{Prabhat2004,
+  author = {Prabhat, P. and Ram, S. and Ward, E.S. and Ober, R.J.},
+  title = {Simultaneous imaging of different focal planes in fluorescence microscopy for the study of cellular dynamics in three dimensions},
+  journal = {IEEE Transactions on Nanobioscience},
+  year = {2004},
+  volume = {3},
+  number = {4},
+  pages = {237-242}
+}
+@article{Meijster2002,
+  author = {Meijster, Arnold and Wilkinson, Michael H.F.},
+  title = {A Comparison of Algorithms for Connected Set Openings and Closings},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2002},
+  volume = {24},
+  number = {4},
+  pages = {484--494},
+  month = {April}
+}
+@article{Venkatesh1990,
+  author = {Venkatesh, S. and Owens, R.},
+  title = {On the Classification of Image Features},
+  journal = {Pattern Recognition Letters},
+  year = {1990},
+  volume = {11},
+  pages = {339--349},
+  month = {May}
+}
+@article{Nummiaro2002,
+  author = {Nummiaro, K. and Koller-Meier, E. and Gool, L. van},
+  title = {An Adaptive Color-Based Particle Filter},
+  journal = {Image and Vision Computing},
+  year = {2003},
+  volume = {21},
+  number = {1},
+  pages = {99-110}
+}
+@mastersthesis{Asselt1997,
+  author = {Asselt, R.J. van},
+  title = {Line and Edge Characterisation Using Mallat Wavelets},
+  year = {1997},
+  address = {Delft},
+  school = {Pattern Recognition Group, Faculty of Applied Physics, Delft University of Technology}
+}
+@article{Grecco2005,
+  author = {Grecco, H. and Lidke, K.A. and Heintzmann, R. and Lidke, D.S. and Spagnuolo, C. and Martinez, O.E. and Jares-Erijman, E.A. and Jovin, T.M.},
+  title = {Ensemble and single particle photophysical properties (two-photon excitation, anisotropy, {FRET}, lifetime, spectral conversion) of commercial quantum dots in solution and in live cells},
+  journal = {Microscopy Research and Technique},
+  year = {2004},
+  volume = {65},
+  number = {3},
+  pages = {169-179}
+}
+@article{Goshtasby1994,
+  author = {Goshtasby, A.},
+  title = {On Edge Focusing},
+  journal = {Image and Vision Computing},
+  year = {1994},
+  volume = {12},
+  number = {4},
+  pages = {247--256},
+  month = {May}
+}
+@article{Kadyrov2001,
+  author = {Kadyrov, A. and Petrou, M. },
+  title = {The Trace transform and its applications },
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {8},
+  annote = {key_radon}
+}
+@misc{Vliet2003,
+  author = {Vliet, L.J. van and Rieger, B.},
+  year = {2003},
+  month = {May},
+  howpublished = {private communications}
+}
+@article{Harscher1996,
+  author = {Harscher, A. and Lichte, H.},
+  title = {Experimental study of amplitude and phase detection limits in electron holography},
+  journal = {Ultramicroscopy},
+  year = {1996},
+  volume = {64},
+  pages = {57-66}
+}
+@inproceedings{Vliet2004,
+  author = {Vliet, L.J. van},
+  title = {Robust Local Max-Min Filters by Normalized Power-Weighted Filtering},
+  year = {2004},
+  pages = {696-699},
+  month = {Cambridge, UK, August 23-26},
+  editor = {Kittler,J. and Petrou, M. and Nixon, M.},
+  publisher = {IEEE Computer Society Press},
+  address = {Los Alamitos},
+  booktitle = {ICPR17, Proceedings 17th International Conference on Pattern Recognition}
+}
+@inproceedings{Knutsson1983b,
+  author = {Knutsson, H. and Granlund, G.H.},
+  title = {Texture Analysis using Two-Dimensional Quadrature Filters},
+  year = {1983},
+  month = {October},
+  address = {Pasadena},
+  booktitle = {IEEE Computer Society Workshop on Computer Architecture for Pattern Analysis and Image Database Management}
+}
+@article{Knutsson1983a,
+  author = {Knutsson, H. and Wilson, R. and Granlund, G.H.},
+  title = {Anisotropic Non-Stationary Image Estimation and its Applications --- {P}art {II}: {P}redictive Image Coding},
+  journal = {IEEE Transactions on Communications},
+  year = {1983},
+  volume = {31},
+  number = {3},
+  pages = {398--406},
+  month = {March}
+}
+@article{Vakman1996,
+  author = {Vakman, D.},
+  title = {On the Analytic Signal, the {Teager--Kaiser} Energy Algorithm, and Other Methods for Defining Amplitude and Frequency},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1996},
+  volume = {44},
+  number = {4},
+  pages = {791--797},
+  month = {April}
+}
+@article{Jepson1991,
+  author = {Jepson, A.D. and Fleet, D.J.},
+  title = {Phase Singularities in Scale-space},
+  journal = {Image and Vision Computing},
+  year = {1991},
+  volume = {9},
+  number = {5},
+  pages = {338--343},
+  month = {October}
+}
+@article{Hanley1999,
+  author = {Hanley, Q.S. and Verveer, P.J. and Jovin, T.M.},
+  title = {Spectral imaging in a programmable array microscope by Hadamard transform fluorescence spectroscopy},
+  journal = {Applied Spectroscopy},
+  year = {1999},
+  number = {53},
+  pages = {1-10}
+}
+@inproceedings{Jepson1990,
+  author = {Jepson, A.D. and Fleet, D.J.},
+  title = {Scale-Space Singularities},
+  year = {1990},
+  pages = {50--55},
+  editor = {O. Faugeras},
+  publisher = {Springer-Verlag},
+  booktitle = {Computer Vision -- ECCV90. Proceedings, 1990}
+}
+@article{Jones1996,
+  author = {Jones, Ronald and Soille, Pierre},
+  title = {Periodic Lines: Definition, Cascades, and Application to Granulometries},
+  journal = {Pattern Recognition Letters},
+  year = {1996},
+  volume = {17},
+  number = {10},
+  pages = {1057--1063}
+}
+@inproceedings{Rutovitz1968,
+  author = {Rutovitz, D.},
+  title = {Datastructures for operations on digital images},
+  year = {1968},
+  pages = {105--133},
+  editor = {Cheng, G.C. and Ledley, R.S. and Pollock, D.K. and Rosenfeld, A.},
+  publisher = {Thompson},
+  address = {Washington, DC},
+  booktitle = {Pictorial Pattern Recognition}
+}
+@inproceedings{Lucas1981,
+  author = {Lucas, B.D. and Kanade, T.},
+  title = { An Iterative Image Registration Technique with an Application to Stereo Vision},
+  year = {1981},
+  pages = {674--679},
+  month = {August},
+  editor = {P.J. Hayes},
+  publisher = {William Kaufmann},
+  address = {Vancouver, B.C., Canada},
+  booktitle = {Proceedings of the Seventh Int. Conf. on Artificial Intelligence}
+}
+@phdthesis{Toft1996,
+  author = {Toft, P.},
+  title = {The Radon Transform - Theory and Implementation},
+  year = {1996},
+  month = {June},
+  address = {Department of Mathematical Modeling, Denmark},
+  school = {Technical University of Denmark},
+  annote = {key_radon}
+}
+@article{Sapiro1993,
+  author = {Sapiro, G. and Kimmel, R. and Shaked, D. and Kimia, B. and Bruckstein, A.M.},
+  title = {Implementing Continuous-Scale Morphology via Curve Evolution},
+  journal = {Pattern Recognition},
+  year = {1993},
+  volume = {26},
+  number = {9},
+  pages = {1363--1372}
+}
+@article{Kanmani1993,
+  author = {Kanmani, S. and Babu Rao, C. and Raj, B.},
+  title = {On the Computation of the Minkowski Dimension using Morphological Operations},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {170, Pt 1},
+  pages = {81--85},
+  month = {April}
+}
+@article{Zhao2004,
+  author = {Zhao, Q. and {\"Ofverstedt}, L.-G. and Skoglund, U. and Isaksson, L.A.},
+  title = {Morphological variation of individual Escherichia coli {50S} ribosomal subunits in situ, as revealed by cryo-electron tomography},
+  journal = {Experimental Cell Research},
+  year = {2004},
+  volume = {300},
+  pages = {190-201}
+}
+@article{Yeong1988a,
+  author = {Yeong, C.L.Y. and Torquato, S.},
+  title = {Reconstructing random media. {II}. Three-dimensional media from two-dimensional cuts},
+  journal = {Physical Review E},
+  year = {1998},
+  volume = {58},
+  number = {1},
+  month = {July}
+}
+@article{Geraets1998,
+  author = {Geraets, W.G.M. and Stelt, P.F. van der and Lips, P. and Ginkel, F.C. van},
+  title = {The Radiographic Trabecular Pattern of Hips in Patients with Hip Fractures and in Elderly Control Subjects},
+  journal = {Bone},
+  year = {1998},
+  volume = {22},
+  number = {2},
+  pages = {165--173}
+}
+@article{Rodriguez2000,
+  author = {Rodriguez-Sanchez, R. and Garcia, J.A. and Fdez-Valdivia, J. and Fdez-Valdivia, X.R.},
+  title = {Origins of Illusory Percepts in Digital Images},
+  journal = {Pattern Recognition},
+  year = {2000},
+  volume = {33},
+  pages = {2007--2017}
+}
+@book{Lenz1990,
+  author = {Lenz, R.},
+  title = {Group Theoretical Methods in Image Processing},
+  year = {1990},
+  publisher = {Springer-Verlag}
+}
+@phdthesis{Geraets1994,
+  author = {Geraets, W.G.M.},
+  title = {Computer Aided Analysis of the Radiographic Trabecular Pattern},
+  year = {1994},
+  address = {Amsterdam, The Netherlands},
+  school = {Vrije Universiteit Amsterdam}
+}
+@article{Grossmann1984,
+  author = {Grossmann, A. and Morlet, J.},
+  title = {Decomposition of {Hardy} functions into square integrable wavelets of constant shape},
+  journal = {SIAM Journal of Mathematics},
+  year = {1984},
+  volume = {15},
+  pages = {723--736}
+}
+@misc{Poynton1999,
+  author = {Poynton, C.},
+  title = {Frequently Asked Questions about Color},
+  year = {1999},
+  howpublished = {{\tt http://www.inforamp.net/~poynton}}
+}
+@book{Matheron1967,
+  author = {Matheron, G.},
+  title = {Elements pour une Theorie des Milieux Poreux},
+  year = {1967},
+  publisher = {Masson},
+  address = {Paris}
+}
+@article{Xu2003,
+  author = {Xu, G. and Bajaj, C.L.},
+  title = {Curvature Computations of 2-manifolds in $\sR^k$},
+  journal = {Journal of Computational Mathematics},
+  year = {2003},
+  volume = {21},
+  number = {5},
+  pages = {681 -- 688}
+}
+@article{Xu2001,
+  author = {Xu, J.},
+  title = {Efficient morphological shape representation with overlapping disk components },
+  journal = {IEEE Transactions on Image Processing},
+  year = {2001},
+  volume = {10},
+  number = {9},
+  pages = {1346 -1356}
+}
+@article{Wilson1984,
+  author = {Wilson, R. and Granlund, G.H.},
+  title = {The Uncertainty Principle in Image Processing},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1984},
+  volume = {6},
+  number = {6},
+  pages = {758--767},
+  month = {November}
+}
+@article{Daniels1952,
+  author = {Daniels, H.E.},
+  title = {The statistical theory of stiff chains},
+  journal = {Proceedings of the Royal Society Edinburgh A},
+  year = {1952},
+  volume = {63},
+  pages = {290-311}
+}
+@article{Wilson1988,
+  author = {Wilson, R. and H. Knutsson, H.},
+  title = {Uncertainty and Inference in the Visual System},
+  journal = {IEEE Transactions on Systems, Man and Cybernetics},
+  year = {1988},
+  volume = {18},
+  number = {2},
+  pages = {305--312},
+  month = {March/April}
+}
+@article{Axelrod1976,
+  author = {Axelrod, D. and Koppel, D.E. and Schlesinger, J. and Elson, E. and Webb, W.W.},
+  title = {Mobility measurement by analysis of fluorescence photobleaching recovery kinetics},
+  journal = {Biophysical Journal},
+  year = {1976},
+  volume = {16},
+  pages = {1055-1069}
+}
+@article{Benes2000,
+  author = {Bene{\v s}, V. and Hlawiczkov? M. and Volen?, K.},
+  title = {Stereological Estimation of Integral Mixed Curvature with Application},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {200, Pt 1},
+  pages = {26--31},
+  month = {October}
+}
+@inproceedings{Bertalmio2000,
+  author = {Bertalmio, M. and Sapiro, G. and Caselles, V. and Ballester, C.},
+  title = {Image Inpainting},
+  year = {2000},
+  month = {July},
+  address = {New Orleans, USA},
+  booktitle = {Proceedings of SIGGRAPH}
+}
+@article{Axelrod1979,
+  author = {Axelrod, D.},
+  title = {Carbocyanine dye orientation in red cell membrane studied by microscopic fluorescence polarization},
+  journal = {Biophysical Journal},
+  year = {1979},
+  volume = {26},
+  pages = {557-574}
+}
+@article{Tang1998,
+  author = {Tang, C.K. and Medioni, G.},
+  title = {Inference of Integrated Surface, Curve, and Junction Descriptions From Sparse 3D Data},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {11},
+  pages = {1206--1223}
+}
+@book{Fukunaga1972,
+  author = {Fukunaga, K.},
+  title = {Introduction to Statistical Pattern Recognition},
+  year = {1972},
+  publisher = {Academic Press},
+  address = {New York}
+}
+@article{Ahmed1974,
+  author = {Ahmed, N. and Natarajan, T. and Rao, K.R.},
+  title = {Discrete cosine transform},
+  journal = {IEEE Transactions on Computers},
+  year = {1974},
+  volume = {23},
+  pages = {88--93},
+  month = {January},
+  annote = {key_fft}
+}
+@article{Topf2005,
+  author = {Topf, M. and Baker, M.L. and John, B. and Chiu, W. and Sali, A.},
+  title = {Structural characterization of components of protein assemblies 3 by comparative modeling and electron cryo-microscopy},
+  journal = {Journal of Structural Biology},
+  year = {2005},
+  volume = {149},
+  pages = {191-203}
+}
+@book{Born1959,
+  author = {Born, M. and Wolf, E.},
+  title = {Principles of Optics},
+  year = {1980, 1977},
+  publisher = {Pergamon Press},
+  edition = {6th}
+}
+@book{Landau1969,
+  author = {Landau, L.D. and Lifshitz,E.M.},
+  title = {Statistical Physics, Part 1},
+  year = {1969},
+  publisher = {Pergamon Press},
+  edition = {second}
+}
+@article{Deegan2000,
+  author = {Deegan, R.D. and Bakajin, O. and Dupont, T.F. and Huber, G. and Nagel, S.R. and Witten, T.A.},
+  title = {Contact line deposits in an evaporating drop},
+  journal = {Physical Review E},
+  year = {2000},
+  volume = {62},
+  number = {1},
+  pages = {756--765}
+}
+@article{Abbe1873,
+  author = {Abbe, E.},
+  title = {{Beitr\"age} zur Theorie des Mikroskopes und der mikroskopischen Wahrnehmung},
+  journal = {Arch Mikrosk Anat},
+  year = {1873},
+  volume = {9},
+  pages = {413-468}
+}
+@article{Rocheleau2003,
+  author = {Rocheleau, J.V. and Edidin, M. and Piston, D.W.},
+  title = {Intrasequence {GFP} in Class {I MHC} Molecules, a Rigid Probe for Fluorescence Anisotropy Measurements of the Membrane Environment},
+  journal = {Biophysical Journal},
+  year = {2003},
+  volume = {84},
+  pages = {4078-4086}
+}
+@article{Hyvarinen1999,
+  author = {{Hyv\"arinen}, A.},
+  title = {Fast and Robust Fixed-Point Algorithms for Independent Component Analysis},
+  journal = {IEEE Transactions on Neural Networks},
+  year = {1999},
+  volume = {10},
+  number = {3},
+  pages = {626-634}
+}
+@article{Hell1995,
+  author = {Hell, S.W. and Soukka, J. and {H\"anninen}, P.E.},
+  title = {Two- and multiphoton detection as an imaging mode and means of increasing the resolution in far-field light microscopy: a study based on photon-optics},
+  journal = {Bioimaging},
+  year = {1995},
+  volume = {3},
+  number = {2},
+  pages = {64-69}
+}
+@article{Hell1994,
+  author = {Hell, S.W. and Lindek, S. and Cremer, C. and Stelzer, E.H.K.},
+  title = {Measurement of the 4pi-confocal point spread function proves 75 nm axial resolution},
+  journal = {Applied Physics Letter},
+  year = {1994},
+  volume = {64},
+  number = {11},
+  pages = {1335-1337}
+}
+@article{Hell1993,
+  author = {Hell, S.W. and Reiner, G. and Cremer, C. and Stelzer, E.H.K.},
+  title = {Aberrations in confocal fluorescence microscopy induced by mismatching in refractive index},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {169},
+  number = {3},
+  pages = {391--405}
+}
+@article{Yin1994,
+  author = {Yin, H. and Landick, R. and Gelles, J.},
+  title = {Tethered particle motion method for studying transcript elongation by a single {RNA} Polymerase Molecule},
+  journal = {Biophysical Journal},
+  year = {1994},
+  volume = {67},
+  pages = {2468-2478}
+}
+@article{Chen1994a,
+  author = {Chen, Q. and Defrise, M. and Deconinck, F.},
+  title = {Symmetric phase only matched filtering of {Fourier-Mellin} transforms for image registration and recognition},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1994},
+  volume = {16},
+  number = {12},
+  pages = {1156--1168}
+}
+@inproceedings{Boomgaard2001,
+  author = {Boomgaard, R. van den and Weij, R. van der},
+  title = {Gaussian Convolutions (Numerical Approximations Based on Interpolation)},
+  year = {2001},
+  volume = {2106},
+  pages = {205--214},
+  editor = {Kerckhove, M.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Vancouver, Canada},
+  booktitle = {Proceedings Third International Conference on Scale-Space}
+}
+@inproceedings{Boomgaard2002,
+  author = {Boomgaard, R. van den and Weijer, J. van de},
+  title = {On the equivalence of local-mode finding, robust estimation and mean-shift analysis as used in early vision tasks},
+  year = {2002},
+  month = {August 11-15},
+  editor = {Kasturi, R. and Laurendeau, D. and Suen, C.},
+  booktitle = {ICPR 2002, International Conference on Pattern Recognition},
+  organization = {IEEE Computer Society}
+}
+@phdthesis{Lindeberg1991,
+  author = {Lindeberg, T.},
+  title = {Discrete Scale-Space Theory and the Scale-Space Primal Sketch},
+  year = {1991},
+  school = {Royal Institute of Technology Stockholm, Sweden}
+}
+@article{Cohen2002,
+  author = {Cohen, A.S. and Lapidoth, A.},
+  title = {The {Gaussian} Watermarking Game},
+  journal = {IEEE Transactions on Information Theory},
+  year = {2002},
+  volume = {48},
+  number = {6},
+  pages = {1639--1667},
+  month = {June}
+}
+@article{Lindeberg1993,
+  author = {Lindeberg, T.},
+  title = {Discrete Derivative Approximations with Scale-space Properties: A Basis for Low-level Feature Extraction},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1993},
+  volume = {3},
+  pages = {349--376}
+}
+@inbook{Davis1971,
+  author = {Davis, R.W. and Simon, M. and Davidson, N.},
+  title = {Electron microscope heteroduplex methods for mapping regions of base sequence homology in nucleic acids},
+  year = {1971},
+  volume = {21D},
+  pages = {413-428},
+  editor = {Grossman, L. and Moldave, K.},
+  publisher = {Academic Press},
+  series = {Methods in Enzymology},
+  address = {London}
+}
+@article{Cohen2005,
+  author = {Cohen, L.},
+  title = {The history of noise},
+  journal = { IEEE Signal Processing Magazine},
+  year = {2005},
+  volume = {22},
+  number = {6},
+  pages = {20-45}
+}
+@article{Lindeberg1998,
+  author = {Lindeberg, T.},
+  title = {Feature Detection with Automatic Scale Selection},
+  journal = {International Journal of Computer Vision},
+  year = {1998},
+  volume = {30},
+  number = {2},
+  pages = {79--116}
+}
+@article{Owens1994,
+  author = {Owens, R.A.},
+  title = {Feature-free Images},
+  journal = {Pattern Recognition Letters},
+  year = {1994},
+  volume = {15},
+  pages = {35--44},
+  month = {January}
+}
+@article{Lumia1983,
+  author = {Lumia, R. and Shapiro, L. and Zuniga, O.},
+  title = {A New Connected Components Algorithm for Virtual Memory Computers},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1983},
+  volume = {22},
+  pages = {287--300}
+}
+@book{Stoyan1985,
+  author = {Stoyan, D. and Kendall, W.S. and Mecke, J.},
+  title = {Stochastic Geometry and its Applications},
+  year = {1985, 1995},
+  publisher = {John Wiley \& Sons, inc},
+  edition = {second}
+}
+@article{Patterson1997,
+  author = {Patterson, G.H. and Knobel, S.M. and Sharif, W.D. and Kain, S.R. and Piston, D.W.},
+  title = {Use of green fluorescent protein and its mutants in quantitative fluorescence microscopy},
+  journal = {Biophysical Journal},
+  year = {1997},
+  volume = {73},
+  number = {5},
+  pages = {2782-2790}
+}
+@inproceedings{Felsberg2001a,
+  author = {Felsberg, M. and Sommer, G.},
+  title = {Scale Adaptive Filtering Derived from the {Laplace} Equation},
+  year = {2001},
+  address = {{M\"unchen}, Germany},
+  booktitle = {DAGM Symposium},
+  note = {extended version.}
+}
+@techreport{Oktem2001,
+  author = {ktem, O.},
+  title = {A short overview of the {COMET} (COnstrained Maximum Entropy Tomography) methodology for solving inverse problems}
+}
+@phdthesis{Ellenberger2000,
+  author = {Ellenberger, S.L.},
+  title = {Influence of defocus on measurements in microscope images },
+  year = {2000},
+  address = {The Netherlands},
+  school = {Technische Universiteit Delft},
+  type = {Thesis}
+}
+@book{Poularikas1996,
+  author = {Poularikas (ed), A.D.},
+  title = {The Transforms and Applications Handbook},
+  year = {1996},
+  publisher = {CRC Press}
+}
+@article{Fleet1990,
+  author = {Fleet, D.J. and Jepson, A.D.},
+  title = {Computation of component image velocity from local phase information},
+  journal = {International Journal of Computer Vision},
+  year = {1990},
+  volume = {5},
+  pages = {77-104}
+}
+@inproceedings{Soille1998,
+  author = {Soille, P. and Talbot, H.},
+  title = {Image Structure Orientation using Mathematical Morphology},
+  year = {1998},
+  volume = {1},
+  pages = {1467-1469},
+  editor = {Jain, A. K. and Venkatesh, S. and Lovell, B. C.},
+  address = {Los Alamitos},
+  booktitle = {Proceedings of the 14th IAPR International Conference on Pattern Recognition},
+  organization = {IEEE Computer Society Press}
+}
+@article{Einstein1905a,
+  author = {Einstein, A.},
+  title = {{Zur Elektro}dynamik bewegter {K\"orper}},
+  journal = {Annalen der Physik},
+  year = {1905},
+  volume = {17},
+  pages = {891-921}
+}
+@article{Einstein1905b,
+  author = {Einstein, A.},
+  title = {Ist die {Tr\"agheit} eines {K\"orpers} von seinem {Energieinhalt} {abh\"angig?}},
+  journal = {Annalen der Physik},
+  year = {1905},
+  volume = {18},
+  pages = {639-641}
+}
+@book{Soille1999,
+  author = {Soille, P.},
+  title = {Morphological Image Analysis. Principles and Applications},
+  year = {1999},
+  publisher = {Springer-Verlag}
+}
+@inproceedings{Knutsson1981,
+  author = {Knutsson , H. and Wilson, R. G. and Granlund, G. H.},
+  title = {Anisotropic Filtering Operations for Image Enhancement and their Relation to the Visual System},
+  year = {1981},
+  month = {August},
+  address = {Dallas, Texas},
+  booktitle = {Proceedings of {IEEE} Computer Society Conference on Pattern Recognition and Image Processing}
+}
+@article{Soille1996,
+  author = {Soille, P. and Breen, E. J. and Jones, R.},
+  title = {Recursive Implementation of Erosions and Dilations Along Discrete Lines at Arbitrary Angles},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1996},
+  volume = {18},
+  number = {5},
+  pages = {562-567}
+}
+@inproceedings{Spies2003,
+  author = {Spies, H. and Forssen, P.E.},
+  title = {Two-Dimensional Channel Representation for Multiple Velocities},
+  year = {2003},
+  pages = {356-362},
+  month = {June 29 -July 2},
+  editor = {{Big\"un}, J. and Gustavsson, T.},
+  publisher = {Springer-Verlag},
+  series = {LNCS 2749},
+  address = {Berlin},
+  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden) }
+}
+@phdthesis{Spies2001,
+  author = {Spies, H.},
+  title = {Analysing Dynamic Processes in Range Data Sequences},
+  year = {2001},
+  month = {July},
+  address = {Heidelberg, Germany},
+  school = {Ruprechts-Karls-{Universit\"at} University}
+}
+@article{Shapiro1978a,
+  author = {Shapiro, S.D.},
+  title = {Properties of Transforms for the Detection of Curves in Noisy Pictures},
+  journal = {Computer Graphics and Image Processing},
+  year = {1978},
+  volume = {8},
+  pages = {219--236},
+  annote = {key_radon}
+}
+@article{Schellman1980,
+  author = {Schellman, J.A.},
+  title = {The flexibility of {DNA : I. Thermal} fluctuations},
+  journal = {Biophysical Chemistry},
+  year = {1980},
+  volume = {11},
+  number = {3},
+  pages = {321-328}
+}
+@article{Klein1972,
+  author = {Klein, J.-C. and Serra, J.},
+  title = {The Texture Analyzer},
+  journal = {Journal of Microscopy},
+  year = {1972},
+  volume = {95},
+  number = {2},
+  pages = {349--356}
+}
+@article{Toffoli1997,
+  author = {Toffoli, T.},
+  title = {Three-Dimensional Rotations by Three Shears},
+  journal = {Graphical Models and Image Processing},
+  year = {1997},
+  volume = {59},
+  number = {2},
+  pages = {89--95},
+  month = {March}
+}
+@article{Sato2000,
+  author = {Sato, Y. and Westin, C.-F. and Bhalerao, A. and Nakajima, S. and Shiraga, N. and Tamura, S. and Kikinus, R.},
+  title = {Tissue Classification Based on 3{D} Local Intensity Structures for Volume Rendering},
+  journal = {IEEE Transactions on Visualization and Computer Graphics},
+  year = {2000},
+  volume = {6},
+  number = {2},
+  pages = {160--179},
+  month = {April--June}
+}
+@article{Kappers1996,
+  author = {Kappers, A.M.L. and Pas, S.F. te and Koenderink, J.J. and Doorn, A.J van},
+  title = {Detection of divergence in optical flow fields},
+  journal = {Journal of the Optical Society of America A},
+  year = {1996},
+  volume = {13},
+  number = {2},
+  pages = {227-235}
+}
+@article{Graham1997,
+  author = {Graham, D.J. and Magdalinos, P. and Pimentel, D.},
+  title = {Detergent Foam Images as Analogue/Digital Model Fluids. 2. Investigation of Neighborship Partition of the Radial Distribution Function},
+  journal = {Journal of Physical Chemistry B},
+  year = {1997},
+  volume = {101},
+  pages = {11212--11220}
+}
+@article{Siegmund1995,
+  author = {Siegmund,D.O. and Worsley, K.J.},
+  title = {Testing for a signal with unknown location and scale in a stationary Gaussian random field},
+  journal = {Annals of Statistics},
+  year = {1995},
+  volume = {23},
+  pages = {608--639}
+}
+@article{Zitova2003,
+  author = {{Zitov\'a}, B. and Flusser, J.},
+  title = {Image registration methods: a survey},
+  journal = {Image and Vision Computing},
+  year = {2003},
+  volume = {21},
+  number = {11},
+  pages = {977-1000}
+}
+@article{Balzarini2001,
+  author = {Balzarini, M. and Nicula, S. and Mattiello, D. and Aliverti, E.},
+  title = {Quantification and Description of Fracture Network by {MRI} Image Analysis},
+  journal = {Magnetic Resonance Imaging},
+  year = {2001},
+  volume = {19},
+  pages = {539--541}
+}
+@article{Watson1994,
+  author = {Watson, A.B.},
+  title = {Image Compression Using the Discrete Cosine Transform},
+  journal = {The Mathematica Journal},
+  year = {1994},
+  volume = {4},
+  number = {1},
+  pages = {81--88}
+}
+@article{Bradley2005,
+  author = {Bradley, J. and Dai Rong, Z. and Erni, R. and Browning, N. and Graham, G. and Weber, P. and Smith, J. and Hutcheon, I. and Ishii, H. and Bajt, S. and Floss, C. and Stadermann, F. and Sandford, S.},
+  title = {An Astronomical 2175 \AA Feature in Interplanetary Dust Particles},
+  journal = {Science},
+  year = {2005},
+  volume = {307},
+  pages = {244-}
+}
+@article{Coene1996,
+  author = {Coene, W.M.J. and Thust, A. and Beeck, M. op de and Dyck, D. van},
+  title = {Maximum-likelihood method for focus-variation image reconstruction in high resolution transmission electron microscopy},
+  journal = {Ultramicroscopy},
+  year = {1996},
+  volume = {64},
+  pages = {109-135}
+}
+@article{Bradley2004,
+  author = {Bradley, J.P. and Dia, Z.R. and Wall, M. and Erni, R. and Browning, N.},
+  title = {An analytical superstem for extraterrestrial materials research},
+  journal = {Lunar and Panetary Science},
+  year = {2004},
+  volume = {35}
+}
+@article{Morrone1987,
+  author = {Morrone, M.C. and Owens, R.A.},
+  title = {Feature Detection from Local Energy},
+  journal = {Pattern Recognition Letters},
+  year = {1987},
+  volume = {6},
+  pages = {303--313},
+  month = {December}
+}
+@inproceedings{Illers2004,
+  author = {Illers, H. and Buhr, E. and Bergmann, D. and Hoeschen, C.},
+  title = {Measurement of the Detective Quantum Efficiency (DQE) of digital X-ray imaging devices according to the standard IEC 62220-1},
+  year = {2004},
+  volume = {5368},
+  number = {1},
+  pages = {177-187},
+  address = {Bellingham, Washington, USA},
+  booktitle = {SPIE Proceedings}
+}
+@article{Princen1994,
+  author = {Princen, J. and Illingworth, J. and Kittler, J.},
+  title = {Hypothesis Testing: A Framework for Analyzing and Optimizing {Hough} Transform Performance},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1994},
+  volume = {16},
+  number = {4},
+  pages = {329--341},
+  month = {April}
+}
+@phdthesis{Bakker2002,
+  author = {Bakker, P.},
+  title = {Image structure analysis for seismic interpretation},
+  year = {2002},
+  address = {The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Saxton1997,
+  author = {Saxton, M.J.},
+  title = {Single-particle tracking: the distribution of diffusion coefficients},
+  journal = {Biophysical Journal},
+  year = {1997},
+  volume = {72},
+  pages = {1744-1753}
+}
+@article{Princen1992,
+  author = {Princen, J. and Illingworth, J. and Kittler, J.},
+  title = {A Formal Definition of the {Hough} Transform: Properties and Relationships},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1992},
+  volume = {1},
+  pages = {153--168}
+}
+@inproceedings{Bakker2001,
+  author = {Bakker, P. and Verbeek, P.W. and Vliet, L.J. van},
+  title = {Confidence and curvature estimation of curvilinear structures in {3-D}},
+  year = {2001},
+  volume = {II},
+  pages = {139--144},
+  month = {July 9-12},
+  booktitle = {ICCV'01 (Vancouver, Canada)},
+  organization = {IEEE}
+}
+@book{Constantinescu1974,
+  author = {Constantinescu, F.},
+  title = {Distributionen und ihre Anwendung in der Physik},
+  year = {1974},
+  publisher = {Teubner},
+  address = {Stuttgart}
+}
+@book{Chung2001,
+  author = {Chung, K.L.},
+  title = {A Course in Probability Theory},
+  year = {2001 (1968)},
+  publisher = {Academic Press},
+  edition = {third}
+}
+@phdthesis{BOOMGAARD1992chap3,
+  author = {Boomgaard, R. van den},
+  title = {Mathematical Morphology: Extensions Towards Computer Vision},
+  year = {1992},
+  school = {University of Amsterdam},
+  note = {Chapter 3, Dimensional Decomposition of Structuring Functions}
+}
+@article{Mindell2003,
+  author = {Mindell, J.A. and Grigorieff, N.},
+  title = {Accurate determination of local defocus and specimen tilt in electron microscopy},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {142},
+  pages = {334-347}
+}
+@article{Chung2000,
+  author = {Chung, D.H. and Sapiro, G.},
+  title = {On the Level Lines and Geometry of Vector-valued Images},
+  journal = {IEEE Signal Processing Letters},
+  year = {2000},
+  volume = {7},
+  number = {9},
+  pages = {241--243},
+  month = {September}
+}
+@article{Pei1997,
+  author = {Pei, S.-C. and Yeh, M.-H.},
+  title = {An Introduction to Discrete Finite Frames},
+  journal = {Signal Processing Magazine},
+  year = {1997},
+  pages = {84--96},
+  month = {November}
+}
+@article{Rooms2005,
+  author = {Rooms, F. and Philips, W. and Lidke, D.S.},
+  title = {Simultaneous degradation estimation and restoration of confocal images and performance evaluation by colocalization analysis},
+  journal = {Journal of Microscopy},
+  year = {2005},
+  volume = {218},
+  number = {1},
+  pages = {22-36}
+}
+@article{Pei1994,
+  author = {Pei, S.-C. and Liou, L.-G.},
+  title = {Using moments to acquire the motion Parameters of a deformable object without correspondence },
+  journal = {Image and Vision Computing},
+  year = {1994},
+  volume = {12},
+  number = {8},
+  pages = {475--485}
+}
+@techreport{TEAMReport2000,
+  author = {Material Science Division Argonne National Laboratory},
+  year = {2000}
+}
+@inproceedings{Felsberg2002,
+  author = {Felsberg, M. and Sommer, G.},
+  title = {Image Features Based on a New Approach to {2D} Rotation Invariant Quadrature Filters},
+  year = {2002},
+  volume = {2350},
+  pages = {369--383},
+  editor = {Heyden, A. and Sparr, G. and Nielsen, M. and Johansen, P.},
+  publisher = {Springer Verlag},
+  series = {Lecture Notes in Computer Science},
+  booktitle = {ECCV 2002 (Copenhagen, Denmark)}
+}
+@article{Parida1998,
+  author = {Parida, L. and Geiger, D. and Hummel, R.},
+  title = {Junctions: Detection, Classification, and Reconstruction},
+  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {7},
+  pages = {687--698},
+  month = {July}
+}
+@inproceedings{Felsberg2000,
+  author = {Felsberg, M. and Sommer, G.},
+  title = {Structure Multivector for Local Analysis of Images},
+  year = {2000},
+  booktitle = {Proc. Dagstuhl Workshop on Theoretical Foundations of Computer Vision}
+}
+@article{Felsberg2001,
+  author = {Felsberg, M. and Sommer, G.},
+  title = {The Monogenic Signal},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {2001},
+  volume = {49},
+  number = {12},
+  pages = {3136--3144}
+}
+@article{Felsberg2004,
+  author = {Felsberg, M. and Sommer, G.},
+  title = {The Monogenic Scale-Space: A Unifying Approach to Phase-Based Image Processing in Scale-Space},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {2004},
+  volume = {21},
+  number = {1},
+  pages = {5--26}
+}
+@article{Stoger-Pollach2006,
+  author = {{St\"oger-Pollach}, M. and Franco, H. and Schattschneider, P. and Lazar, S. and Schaffer, B. and Grogger, W. and Zandbergen, H.W.},
+  title = {Cerenkov losses: A limit for bandgap determination and {Kramers-Kronig} analysis},
+  journal = {Micron},
+  year = {2006},
+  volume = {37},
+  pages = {396-402}
+}
+@article{Dekker1997,
+  author = {Dekker, A.J. den and Bos, A. van den},
+  title = {Resolution: a survey},
+  journal = {Journal of the Optical Society of America A},
+  year = {1997},
+  volume = {14},
+  number = {3},
+  pages = {547-557}
+}
+@article{Porod1953,
+  author = {Porod, G.},
+  title = {X-ray and light scattering by chain molecules in solution},
+  journal = {Journal of Polymer Science},
+  year = {1953},
+  volume = {10},
+  number = {2},
+  pages = {157-166}
+}
+@article{Wong1992,
+  author = {Wong, K. and Kirkland, E. and Xu, P. and Loane, R. and Silcox, J.},
+  title = {Measurement of spherical aberration in {STEM}},
+  journal = {Ultramicroscopy},
+  year = {1992},
+  volume = {40},
+  pages = {139-150}
+}
+@techreport{Cozman1997,
+  author = {Cozman, F.},
+  title = {An Informal Introduction to Quasi-{Bayesian} Theory (and Lower Probability, Lower Expectations, Choquet Capacities, Robust {Bayesian} Methods, etc\dots) for {AI}},
+  year = {1997},
+  address = {Pittsburgh, USA},
+  institution = {The Robotics Institute, Carnegie Mellon University},
+  note = {CMU-RI-TR-97-24}
+}
+@article{Dekker1999,
+  author = {Dekker, A.J. den and Sijbers, J. and Dyck, D. van},
+  title = {How to optimize the design of a quantitative {HREM} experiment so as to attain the highest precision},
+  journal = {Journal of Microscopy},
+  year = {1999},
+  volume = {194},
+  number = {1},
+  pages = {95-104}
+}
+@article{Zhang2003,
+  author = {Zhang, P. and Borgnia, M.J. and Mooney, P. and Shi, D. and Pan, M. and O'Herron, P. and Mao, A. and Brogan, D. and Milne, J.L.S. and Subramaniam, S.},
+  title = {Automated image acquisition and processing using a new generation of {4Kx4K CCD} cameras for cryo electron microscopic studies of macromolecular assemblies},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {143},
+  pages = {135-144}
+}
+@article{Zhang2001,
+  author = {Zhang, J. and Gao, J. and Liu, W.},
+  title = {Image Sequence Segmentation Using 3-D Structure Tensor and Curve Evolution},
+  journal = {IEEE Transactions on Circuits and Systems for Video Technology},
+  year = {2001},
+  volume = {11},
+  number = {5},
+  pages = {629--641},
+  month = {May}
+}
+@article{Kutka1996,
+  author = {Kutka, R. and Stier, S.},
+  title = {Extraction of Line Properties Based on Direction Fields},
+  journal = {IEEE Transactions on Medical Imaging},
+  year = {1996},
+  volume = {15},
+  number = {1},
+  pages = {51--58},
+  month = {February}
+}
+@article{Adams1993,
+  author = {Adams, R.},
+  title = {Radial Decomposition of Discs and Spheres},
+  journal = {CVGIP: Graphical Models and Image Processing},
+  year = {1993},
+  volume = {55},
+  number = {5},
+  pages = {325--332}
+}
+@inproceedings{Gilles1985,
+  author = {Gilles, W.},
+  title = {Universal Computer Program for Seeking of a Collision Free Path for an Industrial Robot},
+  year = {1985},
+  booktitle = {Proceedings of the 15th ISIR Conference (Tokyo)}
+}
+@article{Rushing2001,
+  author = {Rushing, J.A. and Ranganath, H.S. and Hinke, T.H. and Graves, S.J.},
+  title = {Using association rules as texture features},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {8},
+  pages = {845 -858}
+}
+@article{Jonge2004,
+  author = {Jong, N. de and Bonard, J.M.},
+  title = {Carbon nanotube electron sources and applications},
+  journal = {Philosophical Transactions of the Royal Society of London A},
+  year = {2004},
+  volume = {362},
+  pages = {2239-2266}
+}
+@article{Mullikin1992,
+  author = {Mullikin, J.C.},
+  title = {The vector distance transform in two and three dimensions},
+  journal = {Graphical Models and Image Processing},
+  year = {1992},
+  volume = {54},
+  number = {6},
+  pages = {526-535}
+}
+@article{Hermans1952,
+  author = {Hermans, J.J. and Ullman, R.},
+  title = {The statistics of stiff chains, with applications to light scattering},
+  journal = {Physica},
+  year = {1952},
+  volume = {18},
+  number = {11},
+  pages = {951-971}
+}
+@article{Kram1993,
+  author = {Kram, A.M. and Oostergetel, G.T. and Bruggen, E.F.J. van},
+  title = {Localization of branching enzyme in potato tuber cells with the use of immunoelectron microscopy},
+  journal = {Plant Physiology},
+  year = {1993},
+  volume = {101},
+  pages = {237-243}
+}
+@article{Daubechies1986,
+  author = {Daubechies, I. and Grossmann, A. and Meyer, Y.},
+  title = {Painless nonorthogonal expansions},
+  journal = {J. Math. Phys.},
+  year = {1986},
+  volume = {27},
+  pages = {1271--1283}
+}
+@book{Misner1999,
+  author = {Misner, C.W. and Thorne, K.S. and Wheeler, J.A.},
+  title = {Gravitation},
+  year = {1999},
+  publisher = {W.H. Freeman and Company},
+  address = {New York}
+}
+@book{Abramowitz1973,
+  author = {Abramowitz, M. and Stegun, I.A.},
+  title = {Handbook of Mathematical Functions},
+  year = {1973},
+  publisher = {Dover Publications}
+}
+@article{CLIF1,
+  author = {Gull, S. and Lasenby, A. and Doran, C.},
+  title = {Imaginary Numbers are not Real - the Geometric Algebra of Spacetime.},
+  journal = {Found. Phys.},
+  year = {1993},
+  volume = {23},
+  pages = {1775}
+}
+@book{Young1983,
+  author = {Oppenheim, A.V. and Willsky, A.S. and Young, I.T.},
+  title = {Signals and Systems},
+  year = {1983},
+  publisher = {Prentice-Hall}
+}
+@article{Elder1999,
+  author = {Elder, J.H.},
+  title = {Are Edges Incomplete?},
+  journal = {International Journal of Computer Vision},
+  year = {1999},
+  volume = {34},
+  number = {2/3},
+  pages = {97--122}
+}
+@article{Sole2001,
+  author = {{Sol\'e}, A.F. and {L\'opez}, A. and Sapiro, G.},
+  title = {Crease Enhancement Diffusion},
+  journal = {Computer Vision and Image Understanding},
+  year = {2001},
+  volume = {84},
+  pages = {241--248}
+}
+@article{Elder1998,
+  author = {Elder, J.H. and Zucker, S.W.},
+  title = {Local scale control for edge detection and blur estimation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {7},
+  pages = {699--716}
+}
+@book{Vladimirov1986,
+  author = {Vladimirov, S.V.},
+  title = {A Collection of Problems on the Equations of Mathematical Physics},
+  year = {1986},
+  publisher = {Springer},
+  address = {Heildelberg}
+}
+@inproceedings{Elder1996,
+  author = {Elder, J. and Zucker, S.},
+  title = {Scale Space Localization, Blur and Contour-based Image Coding},
+  year = {1996},
+  pages = {27--34},
+  address = {San Francisco, USA},
+  booktitle = {Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition}
+}
+@article{Young1977,
+  author = {Young, I.T.},
+  title = {Proof without Prejudice: Use of the {Kolmogorov-Smirnov} Test for the Analysis of Histograms from Flow Systems and Other Sources},
+  journal = {Journal of Histochemistry and Cytochemistry},
+  year = {1977},
+  volume = {25},
+  number = {7},
+  pages = {935--941}
+}
+@article{Young1974,
+  author = {Young, I.T. and Walker, J.E. and Bowie, J.E.},
+  title = {An Analysis Technique for Biological Shape {I}},
+  journal = {Information and Control},
+  year = {1974},
+  volume = {25},
+  number = {4},
+  pages = {357--370},
+  month = {August}
+}
+@article{Ebeling1993,
+  author = {Ebeling, H. and Wiedemann, G.},
+  title = {Detecting Structure in Two Dimensions Combining Voronoi Tessellation and Percolation},
+  journal = {Physical Review E},
+  year = {1993},
+  volume = {47},
+  number = {1},
+  pages = {704--710},
+  month = {January}
+}
+@article{Goutsias2000,
+  author = {Goutsias, John and Heijmans, Henk J.A.M.},
+  title = {Fundamenta Morphologicae Mathematicae},
+  journal = {Fundamenta Informaticae},
+  year = {2000},
+  volume = {41},
+  pages = {1--31}
+}
+@article{Winkler2003,
+  author = {Winkler, H. and Taylor, K.A.},
+  title = {Focus gradient correction applied to tilt series image data used in electron tomography},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {143},
+  pages = {24-32}
+}
+@article{Winkler2006,
+  author = {Winkler, H. and Taylor, K.A.},
+  title = {Accurate marker-free alignment with simultaneous geometry determination and reconstruction of tilt series in electron tomography},
+  journal = {Ultramicroscopy},
+  year = {2006},
+  volume = {106},
+  pages = {240-254}
+}
+@article{Shapiro1975,
+  author = {Shapiro, S.D.},
+  title = {Transformations for the Computer Detection of Curves in Noisy Pictures},
+  journal = {Computer Graphics and Image Processing},
+  year = {1975},
+  volume = {4},
+  pages = {328--338},
+  annote = {key_radon}
+}
+@article{Weickert2001,
+  author = {Weickert, J. and {Sch\"orr}, C.},
+  title = {Variational Optic Flow Computation with a Spatio-Temporal Smoothness Constraint},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {2001},
+  volume = {14},
+  number = {3},
+  pages = {245 - 255}
+}
+@article{Heintzmann2003a,
+  author = {Heintzmann, R.},
+  title = {Saturated patterned excitation microscopy with two-dimensional excitation patterns},
+  journal = {Micron},
+  year = {2003},
+  volume = {34},
+  number = {7},
+  pages = {283-291}
+}
+@article{Shapiro1978,
+  author = {Shapiro, S.D.},
+  title = {Feature Space Transforms for Curve Detection},
+  journal = {Pattern Recognition},
+  year = {1978},
+  volume = {10},
+  pages = {129--143},
+  annote = {key_radon}
+}
+@article{Verbeek1994kort,
+  author = {Verbeek, P.W. and Vliet, L.J. van },
+  title = {On the location error of curved edges in low-pass filtered {2-D} and {3-D} images },
+  journal = {PAMI},
+  year = {1994},
+  volume = {16},
+  number = {7},
+  pages = {726--733}
+}
+@inproceedings{Thevenaz2000,
+  author = {Th\'evenaz, P. and Blu, T. and Unser M.},
+  title = {Image Interpolation and Resampling},
+  year = {2000},
+  editor = {Bankman, I.},
+  publisher = {Academic Press},
+  booktitle = {Handbook of Medical Image Processing}
+}
+@article{Guessoum1986,
+  author = {Guessoum, A. and Merserau, R.M.},
+  title = {Fast Algorithms for the Multidimensional Discrete {Fourier} Transform},
+  journal = {IEEE Transactions on Acoustics, Speech and Signal Processing},
+  year = {1986},
+  volume = {34},
+  number = {4},
+  pages = {937--943},
+  month = {August},
+  annote = {key_fft}
+}
+@phdthesis{Vrooman1991,
+  author = {Vrooman, H.A.},
+  title = {Quantitative analysis of interferograms},
+  year = {1991},
+  address = {Delft, the Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Levi2005,
+  author = {Levi, V. and Ruan, Q.Q. and Grattown, E.},
+  title = {{3-D} Particle Tracking in a Two-Photon Microscope: Application to the Study of Molecular Dynamics in Cells},
+  journal = {Biophysical Journal},
+  year = {2005},
+  volume = {88},
+  number = {4},
+  pages = {2919-2929}
+}
+@book{Bernerian1992,
+  author = {Berberian, S.K.},
+  title = {Linear Algebra},
+  year = {1992},
+  publisher = {Oxford},
+  address = {Oxford}
+}
+@misc{Zach2003,
+  author = {Zach, J.},
+  title = {Method for detecting geometrical-optical aberrations},
+  year = {2003},
+  howpublished = {US2003/0001102}
+}
+@book{Heijmans1994,
+  author = {Heijmans, H.J.A.M.},
+  title = {Morphological Image Operators},
+  year = {1994},
+  volume = {25},
+  editor = {Hawkes, P.W. and Kazan, B.},
+  publisher = {Academic Press},
+  series = {Advances in Electronics and Electron Physics},
+  address = {San Diego}
+}
+@article{Zemlin1978,
+  author = {Zemlin, F. and Weiss, K. and Schiske, P. and Kunath, W. and Herrmann, K.-H.},
+  title = {Coma-free alignment of high resolution electron microscopes with the aid of optical diffratctorgrams},
+  journal = {Ultramicroscopy},
+  year = {1978},
+  volume = {3},
+  pages = {49-60}
+}
+@article{Goetcherian1980,
+  author = {Goetcherian, V.},
+  title = {From Binary to Grey Tone Image Processing Using Fuzzy Logic Concepts},
+  journal = {Pattern Recognition},
+  year = {1980},
+  volume = {12},
+  pages = {7-15}
+}
+@inbook{Rao2002,
+  author = {Rao, R.},
+  title = {Encyclopedia of Imaging Science and Technology},
+  year = {2002},
+  volume = {2},
+  pages = {1444--1450},
+  editor = {Hornak, J.P.},
+  publisher = {John Wiley\&Sons},
+  chapter = {Wavelet Transforms}
+}
+@book{Jahne2002,
+  author = {{J\"ahne}, B.},
+  title = {Digital Image Processing},
+  year = {2002},
+  publisher = {Springer-Verlag},
+  address = {Berlin}
+}
+@misc{Kahan1995,
+  author = {Kahan, W.},
+  title = {The Baleful Effect of Computer Benchmarks upon Applied Mathematics, Physics and Chemistry},
+  year = {1995},
+  howpublished = {Mathematics Dept., and Elect. Eng. \& Computer Sci. Dept., University of California, USA}
+}
+@article{You1996,
+  author = {You, Y.-L. and Kaveh, M.},
+  title = {Ringing Reduction in Image Restoration by Orientation-Selective Regularization},
+  journal = {IEEE Signal Processing Letters},
+  year = {1996},
+  volume = {3},
+  number = {2},
+  pages = {29--31},
+  month = {February}
+}
+@article{Luengo2005a,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Using Line Segments as Structuring Elements for Sampling-Invariant Measurements},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2005},
+  volume = {27},
+  number = {11},
+  pages = {1826-1831}
+}
+@mastersthesis{Luengo1998,
+  author = {Luengo Hendriks, C.L.},
+  title = {Improved Resolution in Infrared Imaging Using randomly Shifted Images},
+  year = {1998},
+  address = {Delft},
+  school = {Pattern Recognition Group, Faculty of Applied Sciences, Delft University of Technology}
+}
+@article{Gatica2001,
+  author = {Gatica-Perez, D. and Gu, C. and Sun, M.-T. and Ruiz-Correa, S.},
+  title = {Extensive partition operators, gray-level connected operators, and region merging/classification segmentation algorithms: theoretical links },
+  journal = {IEEE Transactions on Image Processing},
+  year = {2001},
+  volume = {10},
+  number = {9},
+  pages = {1332 -1345}
+}
+@article{Keil1996,
+  author = {Keil, F.J.},
+  title = {Modelling of Phenomena within Catalyst Particles},
+  journal = {Chemical Engineering Science},
+  year = {1996},
+  volume = {51},
+  number = {10},
+  pages = {1543--1567},
+  month = {May}
+}
+@misc{Tolimieri2000,
+  author = {Tolimieri, R. and An, M.},
+  title = {Lesser Known {FFT} Algorithms},
+  year = {2000},
+  note = {20th Century Harmonic Analysis -- A Celebration, NATO Advanced Study Institute},
+  annote = {key_fft}
+}
+@inproceedings{Felsberg2000a,
+  author = {Felsberg, M. and Sommer, G.},
+  title = {The Multidimensional Isotropic Generalization of Quadrature Filters in Geometric Algebra},
+  year = {2000},
+  pages = {175--185},
+  publisher = {Springer Verlag},
+  booktitle = {2nd International Workshop on Algebraic Frames for the Perception-Action Cycle, AFPAC 2000, Kiel, Germany}
+}
+@incollection{Young1998,
+  author = {Young, I.T. and Gerbrands, J.J. and Vliet, L.J. van },
+  title = {Image Processing Fundamentals },
+  year = {1998},
+  editor = {Madisetti, V.K. and Williams, D.B.},
+  publisher = {IEEE Press and CRC Press },
+  chapter = {51},
+  booktitle = {The Digital Signal Processing handbook}
+}
+@article{Jeulin2000,
+  author = {Jeulin, D.},
+  title = {Random Texture Models for Material Structures},
+  journal = {Statistics and Computing},
+  year = {2000},
+  volume = {10},
+  pages = {121--132}
+}
+@inproceedings{Young1993,
+  author = {Young, I.T. and Zagers, R. and Vliet, L.J. van and Mullikin, J. and Boddeke, F.R. and Netten, H.},
+  title = {Depth-of-focus in microscopy },
+  year = {1993},
+  pages = {493-498},
+  month = {May 25-28},
+  editor = {{H\o gda}, K. A. and Braathen, B. and Heia, K.},
+  publisher = {Norwegian Society for Image Processing and Pattern Recognition},
+  address = {{Troms\o} Norway},
+  booktitle = {SCIA'93, Proceedings of the 8th Scandinavian Conference on Image Analysis}
+}
+@article{HaarRomeny1994,
+  author = {Haar Romeny, B.M. ter and Florack, L.M.J. and Salden, A.H. and Viergever, M.A.},
+  title = {Higher order differential structure of images},
+  journal = {Image and Vision Computing},
+  year = {1994},
+  volume = {12},
+  number = {6},
+  pages = {317-325}
+}
+@article{Haider1998,
+  author = {Haider, M. and Rose, H. and Uhlemann, S. and Schwan, E. and Kabius, B. and Urban, K.},
+  title = {A spherical-aberration-corrected 200 {kV} transmission electron microscope},
+  journal = {Ultramicroscopy},
+  year = {1998},
+  volume = {75},
+  pages = {53-60}
+}
+@article{Young1995,
+  author = {Young, I.T. and Vliet, L.J. van},
+  title = {Recursive implementation of the {G}aussian filter},
+  journal = {Signal Processing},
+  year = {1995},
+  volume = {44},
+  number = {2},
+  pages = {139--151}
+}
+@article{Young1996,
+  author = {Young, I.T.},
+  title = {Quantitative Microscopy},
+  journal = {IEEE Engineering in Medicine and Biology},
+  year = {1996},
+  volume = {15},
+  number = {1},
+  pages = {59-66}
+}
+@article{Milne2002,
+  author = {Milne, J.L.S. and Shi, D. and Rosenthal, P.B. and Sunshine, J.S. and Domingo, G.J. and Wu, X. and Brooks, B.R. and Perham, R.N. and Henderson, R. and Subramaniam, S.},
+  title = {Molecular architecture and mechanism of an icosahedral pyruvate dehydrogenase complex: a multifunctional catalytic machine},
+  journal = {EMBO Journal},
+  year = {2002},
+  volume = {21},
+  pages = {5587-5598}
+}
+@incollection{Ginkel2001a,
+  author = {Ginkel, M. van and Vliet, L.J. van and Verbeek, P.W.},
+  title = {Applications of Image Analysis in Orientation Space},
+  year = {2001},
+  pages = {365--380},
+  editor = {Vossepoel, A.M. and Vos, F.M.},
+  booktitle = {Fourth Quinqennial Review 1996-2001 of the Dutch Society for Pattern Recognition and Image Processing}
+}
+@book{Schone1990,
+  author = {W. {Sch\"one}},
+  title = {Differentialgeometrie},
+  year = {1990},
+  publisher = {Teubner},
+  address = {Leipzig}
+}
+@article{Nickell2004,
+  author = {Nickell, S. and {F\"orster}, F. and Linaroudis, A. and Net, W. del and Beck, F. and Hegerl, R. and Baumeister, W. and Plizko, J.M.},
+  title = {{TOM} software toolbox: acquisition and analysis for electron tomography},
+  journal = {Journal of Strcutural Biology},
+  year = {2004},
+  volume = {149},
+  number = {3},
+  pages = {227-234}
+}
+@inproceedings{Kaltenbacher1996,
+  author = {Kaltenbacher, E.A. and Hardie, R.C.},
+  title = {High resolution infrared image reconstruction using multiple, low resolution, aliased frames},
+  year = {1996},
+  volume = {2751},
+  pages = {142-152},
+  booktitle = {SPIE Proceedings}
+}
+@article{Yaroslavsky2003,
+  author = {Yaroslavsky, L.},
+  title = {Boundary effect free and adaptive discrete signal sinc-interpolation algorithms for signal and image resampling},
+  journal = {Applied Optics},
+  year = {2003},
+  volume = {42},
+  number = {20},
+  pages = {4166-4175}
+}
+@article{Yeong1998,
+  author = {Yeong, C.L.Y. and Torquato, S.},
+  title = {Reconstructing random media},
+  journal = {Physical review E},
+  year = {1998},
+  volume = {57},
+  number = {1},
+  month = {January}
+}
+@inproceedings{Leonardis1992,
+  author = {Leonardis, A. and Bajcsy, R.},
+  title = {Finding Parametric Curves in an Image},
+  year = {1992},
+  pages = {653--657},
+  month = {May},
+  editor = {Sandini, G.},
+  publisher = {Springer},
+  series = {Lecture Notes in Computer Science 588},
+  address = {Santa Margherita Ligure, Italy},
+  booktitle = {Second European Conference on Computer Vision}
+}
+@article{Wallrabe2005,
+  author = {Wallrabe, H. and Periasamy, A.},
+  title = {Imaging protein molecules using FRET and FLIM microscopy},
+  journal = {Current Opinion in Biotechnology},
+  year = {2005},
+  volume = {16},
+  number = {1},
+  pages = {19-27}
+}
+@article{Barron1994,
+  author = {Barron, J.L. and Fleet, D.J. and Beauchemin, S.},
+  title = {Performance of optical flow techniques},
+  journal = {International Journal of Computer Vision},
+  year = {1994},
+  volume = {12},
+  number = {1},
+  pages = {43--77}
+}
+@book{Bronstein2000,
+  author = {Bronstein, I.N. and Semendjajew, K.A. and Musiol, G. and {M\"uhlig}, H.},
+  title = {Taschenbuch der Mathematik},
+  year = {2000},
+  publisher = {Verlag Harri Deutsch}
+}
+@article{Martin2001,
+  author = {Martin, C. san and Burnett, R.M. and Hass, F. de and Heinkel, R. and Rutten, T. and Fuller, S.D. and Butcher, S.J. and Bamford, D.H.},
+  title = {Combined {EM/X}-Ray Imaging Yields a Quasi-Atomic Model of the Adenovirus-Related Bacteriophage {PRD1} and Shows Key Capsid and Membrane Interactions},
+  journal = {Structure},
+  year = {2001},
+  volume = {9},
+  pages = {917-930}
+}
+@article{Cowley1969,
+  author = {Cowley, J.M.},
+  title = {Image contrast in a transmission scanning electron microscope},
+  journal = {Applied Physics Letters},
+  year = {1969},
+  volume = {15},
+  number = {2},
+  pages = {58-59}
+}
+@article{Rivetti2001,
+  author = {Rivetti, C. and Codeluppi, S.},
+  title = {Accurate length determination of {DNA} molecules visualized by atomic force microscopy: evidence for a partial {B-} to {A-form} transition on mica},
+  journal = {Ultramicroscopy},
+  year = {2001},
+  volume = {87},
+  number = {1-2},
+  pages = {55-66}
+}
+@article{Aert2004,
+  author = {Aert, S. van and Dekker, A.J. den and Dyck, D. van},
+  title = {How to optimize the experimental design of quantitative atomic resolution {TEM} experiments?},
+  journal = {Micron},
+  year = {2004},
+  volume = {35},
+  pages = {425-429}
+}
+@book{Fraleigh1994,
+  author = {Fraleigh, J.B.},
+  title = {A First Course in Abstract Algebra},
+  year = {1994},
+  publisher = {Addison-Wesley},
+  edition = {5th}
+}
+@article{Duffin1952,
+  author = {Duffin, R.J. and Schaeffer, A.C.},
+  title = {A Class of Nonharmonic {Fourier} Series},
+  journal = {Transactions of the American Mathematical Society},
+  year = {1952},
+  volume = {72},
+  pages = {341--366},
+  month = {March}
+}
+@article{Aert2002,
+  author = {Aert, S. van and Dekker, A.J. den and Dyck, D. van and Bos, A. van den},
+  title = {High-resolution electron microscopy and electron tomography: resolution versus precision},
+  journal = {Journal of Structural Biology},
+  year = {2002},
+  volume = {138},
+  pages = {21-33}
+}
+@article{Cootes2001,
+  author = {Cootes, T.F. and Edwards, G.J. and Taylor, C.J.},
+  title = {Active Appearance Models},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {6},
+  pages = {681--685},
+  month = {June}
+}
+@article{Hilfer1991,
+  author = {Hilfer, R.},
+  title = {Geometric and Dielectric Characterization of Porous Media},
+  journal = {Physical Review B},
+  year = {1991},
+  volume = {44},
+  number = {1},
+  pages = {60--75},
+  month = {July}
+}
+@article{Hilfer1992,
+  author = {Hilfer, R.},
+  title = {Local-Porosity Theory for Flow in Porous Media},
+  journal = {Physical Review B},
+  year = {1992},
+  volume = {45},
+  number = {13},
+  pages = {7115--7121},
+  month = {April}
+}
+@article{Rieger2004c,
+  author = {Rieger, B. and Molenaar, C. and Dirks, R.W. and Vliet, L.J.},
+  title = {Alignment of the Cell Nucleus From Labeled Proteins Only for {4D} In Vivo Imaging},
+  journal = {Microscopy Research and Technique},
+  year = {2004},
+  volume = {64},
+  pages = {142-150}
+}
+@unpublished{VerbeekXXXX,
+  author = {Verbeek, P.W.},
+  title = {Line and Edge Detection by Symmetry Filters}
+}
+@article{Heertje1998,
+  author = {Heertje, I. and Roijers, E.C. and Hendrikx, H.A.C.M.},
+  title = {Liquid Crystalline Phases in the Structuring of Food Products},
+  journal = {Lebensmittel-Wissenschaft und Technologie},
+  year = {1998},
+  number = {31},
+  pages = {387--396}
+}
+@article{Ritchie1974,
+  author = {Ritchie, D.M. and Thompson, K.},
+  title = {The {UNIX} Time-Sharing System},
+  journal = {Communications of the {ACM}},
+  year = {1974},
+  volume = {17},
+  number = {7},
+  pages = {365--375},
+  month = {July}
+}
+@inproceedings{Blanc1995,
+  author = {Blanc, C. and Schlick, C.},
+  title = {{X}-Splines: A Spline Model Designed for the End-User},
+  year = {1995},
+  pages = {377--386},
+  booktitle = {Proceedings of SIGGRAPH}
+}
+@article{Zwiggelaar1999,
+  author = {Zwiggelaar, R. and Parr, T. and Schumm, J.E. and Hutt, I.W. and Taylor, C.J. and Astley, S.M. and Boggis, R.M.},
+  title = {Model-based Detection of Spiculated Lesions in Mammograms},
+  journal = {Medical Image Analysis},
+  year = {1999},
+  volume = {3},
+  number = {1},
+  pages = {39-62}
+}
+@article{Pothuaud2000,
+  author = {Pothuaud, L. and Porion, P. and Lespessailles, E. and Benhamou, C.L. and Levitz, P.},
+  title = {A New Method for Three-Dimensional Skeleton Graph Analysis of Porous Media: Application to Trabecular Bone Microarchitecture},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {199, Pt 2},
+  pages = {149--161},
+  month = {August}
+}
+@inproceedings{Zwiggelaar1998,
+  author = {Zwiggelaar, R. and Taylor, C.J.},
+  title = {Abnormal Masses in Mammograms: Detection Using Scale-Orientation Signatures},
+  year = {1998},
+  volume = {1496},
+  publisher = {Springer Verlag},
+  series = {Lecture Notes in Computer Science},
+  address = {Berlin},
+  booktitle = {Medical Image Computing and Computer-Assisted Intervention - MICCAI'98, Proc. 1st Int. Conf. (Cambridge, MA, USA, Oct.11-13)}
+}
+@article{Besag1974,
+  author = {Besag, J.E.},
+  title = {Spatial Interaction and the Statistical Analysis of Lattice Systems},
+  journal = {Journal of the Royal Statistical Society, Series B},
+  year = {1974},
+  volume = {36},
+  pages = {192--236}
+}
+@inproceedings{SHORTGlas2001,
+  author = {Glas, M. van der and Vos, F.M. and Vossepoel, A.M.},
+  title = {Assessment of Center of Rotation of the Glenohumeral Joint by a Modified {H}ough Transform},
+  year = {2001},
+  volume = {2208},
+  series = {Lecture Notes on Computer Science}
+}
+@article{Liang2002,
+  author = {Liang, Y. and Ke, E.Y. and Zhou, Z.H.},
+  title = {{IMIRS}: a high-resolution 3D reconstruction pachage integrated with a relational image database},
+  journal = {Journal of Structural Biology},
+  year = {2002},
+  volume = {137},
+  pages = {292-304}
+}
+@article{Wang2005,
+  author = {Wang, H.-W. and Nogales, E.},
+  title = {An iterative Fourier-Bessel algorithm for reconstruction of helical structures with severe Bessel overlap},
+  journal = {Journal of Structural Biology},
+  year = {2005},
+  volume = {149},
+  pages = {65-78}
+}
+@article{Milanfar1999,
+  author = {P. Milanfar},
+  title = {A Model of the Effect on Image Motion in the Radon Transform Domain},
+  journal = {IEEE Transaction on Image Processing},
+  year = {1999},
+  volume = {8},
+  number = {9},
+  pages = {1276--1281},
+  annote = {key_radon}
+}
+@article{Lee1997,
+  author = {Lee, Kyung-Hoon and Morales, Aldo and Ko, Sung-Jea},
+  title = {Adaptive Basis Matrix for the Morphological Function Processing Opening and Closing},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1997},
+  volume = {6},
+  number = {5},
+  pages = {769--774},
+  month = {May}
+}
+@article{DeRosier2000,
+  author = {DeRosier, D.J.},
+  title = {Correction of high-resolution data for curvature of the {Ewald} sphere},
+  journal = {Ultramicrosocpy},
+  year = {2000},
+  volume = {81},
+  number = {2},
+  pages = {83-98}
+}
+@article{Jansen1993,
+  author = {Jansen, R.C. and Reinink, K. and Heijden, G.W.A.M. van der},
+  title = {Analysis of Grey Level Histograms by using Statistical Methods for Mixtures of Distributions},
+  journal = {Pattern Recognition Letters},
+  year = {1993},
+  volume = {14},
+  pages = {585--590}
+}
+@article{Lee1999,
+  author = {Lee, M.S. and Medioni, G.},
+  title = {Grouping ., -, {$\rightarrow$}, ?, into Regions, Curves, and Junctions},
+  journal = {Computer Vision and Image Understanding},
+  year = {1999},
+  volume = {76},
+  number = {1},
+  pages = {54--69},
+  month = {October}
+}
+@article{Schellman1995,
+  author = {Schellman, J.A. and Harvey, S.C.},
+  title = {Static contributions to the persistence length of {DNA} and dynamic contributions to {DNA} curvature},
+  journal = {Biophysical Chemistry},
+  year = {1995},
+  volume = {55},
+  number = {1},
+  pages = {95-114}
+}
+@article{Bigun1994a,
+  author = {{Big\"un}, J. and Hans du Buf, J.M.},
+  title = {{N}-folded Symmetries by Complex Moments in {Gabor} Space and their Application to Unsupervised Texture Segmentation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1994},
+  volume = {16},
+  number = {1},
+  pages = {80--87},
+  month = {January}
+}
+@inproceedings{Danielsson1980a,
+  author = {Danielsson, P.-E.},
+  title = {Rotation-Invariant Linear Operators with Directional Response},
+  year = {1980},
+  volume = {2},
+  pages = {1171--1176},
+  month = {December},
+  booktitle = {Proceedings of the 5th international conference on Pattern Recognition (Miami Beach, Florida)}
+}
+@article{Heintzmann2003,
+  author = {Heintzmann, R. and Sarafis, V. and Munroe, P. and Nailon, J. and Hanley, Q.S. and Jovin, T.M.},
+  title = {On resolution enhancement by subtraction of confocal signals taken at different pinhole sizes},
+  journal = {Micron},
+  year = {2003},
+  volume = {34},
+  number = {7},
+  pages = {293-300}
+}
+@article{Arnison2002,
+  author = {Arnison, M.R. and Sheppard, C.J.R.},
+  title = {A 3D vectorial optical transfer function suitable for arbitrary pupil functions},
+  journal = {Optics Communications},
+  year = {2002},
+  volume = {211},
+  pages = {53-63}
+}
+@article{Heintzmann2002,
+  author = {Heintzmann, R. and Jovin, T.M. and Cremer, C.},
+  title = {Saturated patterned excitation microscopy concept for optical resolution improvement},
+  journal = {Journal of Optical Society of America A},
+  year = {2002},
+  volume = {19},
+  number = {8},
+  pages = {1599-1609}
+}
+@inproceedings{Yu2000,
+  author = {Yu, W. and Daniilidis, K. and Sommer, G.},
+  title = {A New 3{D} Orientation Steerable Filter},
+  year = {2000},
+  pages = {203--212},
+  publisher = {Springer Verlag},
+  booktitle = {Symposium {f\"ur} Mustererkennung, DAGM 2000, Kiel, Germany}
+}
+@article{Yu2001,
+  author = {Yu, W. and Daniilidis, K. and Sommer, G.},
+  title = {Approximate Orientation Steerability Based on Angular Gaussians},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2001},
+  volume = {10},
+  number = {2},
+  pages = {193--205},
+  month = {February}
+}
+@inbook{Arnison2003,
+  author = {Arnison, M.R. and Cogswell, C.J. and Sheppard, C.J.R. and {T\"or\"ork}, P.},
+  title = {Wavefront Coding Fluorescence Microscopy Using High Aperture Lenses},
+  year = {2003},
+  editor = {{T\"or\"ork}, P. and Kao, F.J.},
+  publisher = {Springer-Verlag},
+  series = {Optical imaging and microscopy - Techniques and Advanced Systems},
+  address = {Heidelberg, }
+}
+@article{Heintzmann2004,
+  author = {Heintzmann, R. and Lidke, K.A. and Jovin, T.M.},
+  title = {Double-pass Fourier transform imaging spectroscopy},
+  journal = {Optics Express},
+  year = {2004},
+  volume = {12},
+  pages = {753-763}
+}
+@article{Yu2003,
+  author = {Yu, W. and Sommer, G. and Daniilidis, K.},
+  title = {Three Dimensional Orientation Signatures with Conic Kernel Filtering for Multiple Motion Analysis},
+  journal = {Image and Vision Computing},
+  year = {2003},
+  volume = {21},
+  number = {5},
+  pages = {447--458}
+}
+@article{Hyun2000,
+  author = {Hyun Chung, D. and Sapiro, G.},
+  title = {On the Level Lines and Geometry of Vector Valued Images},
+  journal = {IEEE Signal Processing Letters},
+  year = {2000},
+  volume = {7},
+  pages = {241--243}
+}
+@article{Schellman1974,
+  author = {Schellman, J.A.},
+  title = {Flexibility of {DNA}},
+  journal = {Biopolymers},
+  year = {1974},
+  volume = {13},
+  number = {1},
+  pages = {217-226}
+}
+@article{Mastronarde1997,
+  author = {Mastronarde, D.N.},
+  title = {Dual-Axis Tomography: An Approach with Alignment Methods That Preserve Resolution},
+  journal = {Journal of Structural Biology},
+  year = {1997},
+  volume = {120},
+  pages = {343-352}
+}
+@article{Verveer2000,
+  author = {Verveer, P.J. and Squire, A. and Bastiaens, P.I.H.},
+  title = {Global Analysis of Fluorescence Lifetime Imaging Microscopy Data},
+  journal = {Biophysical Journal},
+  year = {2000},
+  volume = {78},
+  pages = {2127-2137}
+}
+@article{Hermann1993,
+  author = {Hermann, H. and Ohser, J.},
+  title = {Determination of Microstructural Parameters of Random Spatial Surface Fractals by Measuring Chord Length Distributions},
+  journal = {Journal of Microscopy},
+  year = {1993},
+  volume = {170, Pt 1},
+  pages = {87--93},
+  month = {April}
+}
+@article{Kuwahara1976,
+  author = {Kuwahara, M. and Hachimura, K. and Eiho, S. and Kinoshita, M.},
+  title = {Processing of RI-angiocardiographic images},
+  journal = {Digital Processing of Biomedical Images},
+  year = {1976},
+  pages = {187-203}
+}
+@article{Luo1998,
+  author = {Luo, D. and Barker, J. and McGrath, J.C. and Daly, C.J.},
+  title = {Iterative Multilevel Thresholding and Splitting for Three-Dimensional Segmentation of Live Cell Nuclei Using Laser Scanning Confocal Microscopy},
+  journal = {Journal of Computer-Assisted Microscopy},
+  year = {1998},
+  volume = {10},
+  number = {4},
+  pages = {151--162}
+}
+@article{Jaffer1993,
+  author = {Jaffer, A.},
+  title = {Algebra and the Lambda Calculus},
+  journal = {Dr. Dobbs's Journal},
+  year = {1993},
+  pages = {36--40},
+  month = {September}
+}
+@book{Stoecker2000,
+  author = {{St\"ocker}, H.},
+  title = {Taschenbuch der {Physik}},
+  year = {2000},
+  publisher = {Verlag Harri Deutsch},
+  address = {Frankfurt (Main)},
+  edition = {4}
+}
+@article{Mouche2001,
+  author = {Mouche, F. and Boisset, N. and Penczek, P.A.},
+  title = {Lumbricus terrestris Hemoglobin - The Architecture of Linker Chains and Structural Variation of the Central Toroid},
+  journal = {Journal of Structural Biology},
+  year = {2001},
+  volume = {133},
+  pages = {176-192}
+}
+@article{Mouche2003,
+  author = {Mouche, F. and Zhu, Y. and Pulokas, J. and Potter, C.S. and Carragher, B.},
+  title = {Automated three-dimensional reconstruction of keyhole limpet hemocyanin type 1},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {144},
+  pages = {301-312}
+}
+@article{Knuth1987,
+  author = {Knuth, D.E.},
+  title = {Digital Halftones by Dot Diffusion},
+  journal = {ACM Transactions on Graphics},
+  year = {1987},
+  volume = {6},
+  number = {4},
+  pages = {245--273},
+  month = {October}
+}
+@article{Scharstein2002,
+  author = {Scharstein, D. and Szeliski, R.},
+  title = {A Taxonomy and Evaluation of Dense Two-Frame Stereo Correspondence Algorithms},
+  journal = {International Journal of Computer Vision},
+  year = {2002},
+  volume = {47},
+  number = {1},
+  pages = {7--42},
+  month = {April-June}
+}
+@article{Teuner1995,
+  author = {Teuner, A. and Pichler, O. and Hosticka, B.J.},
+  title = {Unsupervised Texture Segmentation of Images Using Tuned Matched Gabor Filters},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1995},
+  volume = {4},
+  number = {6},
+  pages = {863--870},
+  month = {June}
+}
+@article{Kubitscheck2002,
+  author = {Kubitscheck, U.},
+  title = {Single Protein Molecules Visualized and Tracked in the Interior of Eukaryotic Cells},
+  journal = {Single Molecule},
+  year = {2002},
+  volume = {3},
+  number = {5-6},
+  pages = {267-274}
+}
+@article{Wigner1932,
+  author = {Wigner, E.},
+  title = {On the Quantum Correction For Thermodynamic Equilibrium},
+  journal = {Physical Review},
+  year = {1932},
+  volume = {40},
+  number = {5},
+  pages = {749--759},
+  month = {June}
+}
+@phdthesis{Gokstorp1995,
+  author = {{G\"okstorp}, M.},
+  title = {Depth Computation in Robot Vision},
+  year = {1995},
+  address = {{Link\"oping}, Sweden},
+  school = {{Link\"oping} University}
+}
+@article{Zuccheri2001,
+  author = {Zuccheri, G. and Scipioni, A. and Cavaliere, V. and Gargiulo, G. and Sanits, P. de and Samori, B. },
+  title = {Mapping the intrinsic curvature and flexibility along the {DNA} chain},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2001},
+  volume = {98},
+  number = {6},
+  pages = {3074-3079}
+}
+@article{Singleton1969,
+  author = {Singleton, R.C.},
+  title = {An Algorithm for Computing the Mixed Radix Fast {Fourier} Transform},
+  journal = {IEEE Transactions on Audio and Electroacoustics},
+  year = {1969},
+  volume = {17},
+  number = {2},
+  pages = {93--103},
+  month = {June},
+  annote = {key_fft}
+}
+@article{Daubechies1990,
+  author = {Daubechies, I.},
+  title = {The Wavelet Transform, Time-Frequency Localization and Signal Analysis},
+  journal = {IEEE Transactions on Information Theory},
+  year = {1990},
+  volume = {36},
+  number = {5},
+  pages = {961--1005},
+  month = {September}
+}
+@inproceedings{Dubowy2005,
+  author = {Dubowy, J.N. and Herman, G.T.},
+  title = {An approach to the correction of distance-dependent defocus in electron microscopic reconstruction},
+  year = {2005},
+  volume = {3},
+  pages = {748-751},
+  series = {IEEE International Conference on Image Processing}
+}
+@article{Whittaker1934,
+  author = {Whittaker, J.M.},
+  title = {On Lidstone's Series and Two-point Expansions of Analytic Functions},
+  journal = {Proceedings London Math. Soc. (2)},
+  year = {1934},
+  volume = {36},
+  pages = {451--469}
+}
+@article{Unser2000,
+  author = {Unser, M.},
+  title = {Sampling -- 50 Years after {Shannon}},
+  journal = {Proceedings of the IEEE},
+  year = {2000},
+  volume = {88},
+  number = {4},
+  pages = {569--587},
+  month = {April}
+}
+@article{Edelman1999,
+  author = {Edelman, A. and McCorquodale, P. and Toledo, S.},
+  title = {The Future Fast {Fourier} Transform?},
+  journal = {SIAM Journal on Scientific Computing},
+  year = {1999},
+  volume = {20},
+  number = {3},
+  pages = {1094--1114},
+  annote = {key_fft}
+}
+@book{Jahne1997a,
+  author = {{J\"ahne}, B.},
+  title = {Practical handbook on Image Processing for Scientific Applications},
+  year = {1997},
+  publisher = {CRC Press}
+}
+@article{Brox2006,
+  author = {Brox, T. and Weickert, J. and Burgeth, B. and Mrazek, P.},
+  title = {Nonlinear structure tensor},
+  journal = {Image and Vision Computing},
+  year = {2006},
+  volume = {24},
+  pages = {41-55}
+}
+@article{Zheng2004,
+  author = {Zheng, Q.S. and Braunfeld, M.B. and Sedat, J.W. and Agard, D.A.},
+  title = {An improved strategy for automated electron microscopic tomography},
+  journal = {Journal of Structural Biology},
+  year = {2004},
+  volume = {147},
+  pages = {91-101}
+}
+@article{Chepic1990,
+  author = {Chepic, D.I. and Efros, A.L. and Ekimov, A.I. and Ivanov, M.G. and Kharchenko, V.A. and Kudriavtsev, I.A. and Yazeva, T.V.},
+  title = {Auger ionization of semiconductor quantum drops in a glass matrix},
+  journal = {Journal of Luminescence},
+  year = {1990},
+  volume = {47},
+  number = {3},
+  pages = {113-127}
+}
+@article{Frenken1993,
+  author = {Frenken, J.W.M. and Kuipers, L. and Sanders, J.B.},
+  title = {Thermal Roughening Investigated by Scanning Tunnelling Microscopy},
+  journal = {Faraday Discussions},
+  year = {1993},
+  volume = {95},
+  pages = {27--36}
+}
+@article{Hilton1995,
+  author = {Hilton, A. and Illingworth, J. and Windeatt, T.},
+  title = {Statistics of surface curvature estimates},
+  journal = {Pattern Recognition},
+  year = {1995},
+  volume = {28},
+  number = {8},
+  pages = {1201--1221}
+}
+@article{Voort1995,
+  author = {T.M. van der Voort and K.C. Strassers},
+  title = {Restoration of confocal images for quantitative image analysis},
+  journal = {J. Microscopy},
+  year = {1995},
+  volume = {178},
+  pages = {165--181}
+}
+@article{Schatzman1996,
+  author = {Schatzman, J.C.},
+  title = {Index Mappings for the Fast {Fourier} Transform},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1996},
+  volume = {44},
+  number = {3},
+  pages = {717--719},
+  month = {March},
+  annote = {key_fft}
+}
+@misc{WeickertXXXX,
+  author = {Weickert, J.},
+  title = {Nonlinear Diffusion Scale-Spaces}
+}
+@book{Reimer1997,
+  author = {Reimer, L.},
+  title = {Transition Electron Microscopy},
+  year = {1997},
+  publisher = {Springer Verlag},
+  address = {Berlin},
+  edition = {4th},
+  note = {sold out, reprint 2006}
+}
+@article{Fukano2003,
+  author = {Fukano, T. and Miyawaki, A.},
+  title = {Whole-Field Fluorescence Microscope with Digital Micromirror Device: Imaging of Biological Samples},
+  journal = {Applied Optics},
+  year = {2003},
+  volume = {42},
+  number = {19},
+  pages = {4119-4124}
+}
+@article{Lifshitz1990,
+  author = {Lifshitz, L.M. and Pizer, S.M.},
+  title = {A Multiresolution Hierarchical Approach to Image Segmentation Based on Intensity Extrema},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1990},
+  volume = {12},
+  number = {6},
+  pages = {529--540},
+  month = {June}
+}
+@article{Zenzo1986,
+  author = {Zenzo, S. di},
+  title = {A Note on the Gradient of a Multi-Image},
+  journal = {Computer Vision, Graphics and Image Processing},
+  year = {1986},
+  volume = {33},
+  pages = {116--125}
+}
+@article{Ranson2001,
+  author = {Ranson, N.A. and Farr, G.W. and Roseman, A.M. and Gowen, B. and Fenton, W.A. and Horwich, A.L. and Saibil, H.R.},
+  title = {{ATP}-Bound States of {GroEL} Captured by Cryo-Electron Microscopy},
+  journal = {Cell},
+  year = {2001},
+  volume = {107},
+  pages = {869-879}
+}
+@article{Fukano2004,
+  author = {Fukano, T. and Hama, H. and Miyawaki, A.},
+  title = {Similar diffusibility of membrane proteins across the axon-soma and dendrite-soma boundaries revealed by a novel {FRAP} technique},
+  journal = {Journal of Structural Biology},
+  year = {2004},
+  volume = {147},
+  pages = {12-18}
+}
+@article{Pape1999,
+  author = {Pape, H. and Clauser, C. and Iffland, J.},
+  title = {Permeability prediction based on fractal pore-space geometry},
+  journal = {Geophysics},
+  year = {1999},
+  volume = {64},
+  number = {5},
+  pages = {1447--1460},
+  month = {September/October}
+}
+@article{Ritchie1984,
+  author = {Ritchie, D.M.},
+  title = {The Evolution of the Unix Time-sharing System},
+  journal = {{AT\&T} Bell Laboratories Technical Journal},
+  year = {1984},
+  volume = {63},
+  number = {6},
+  pages = {1577-1593},
+  month = {October}
+}
+@article{Streekstra2001,
+  author = {Streekstra, G.J. and Boomgaard, R. van den and Smeulders, A.W.M.},
+  title = {Scale dependent differential geometry for the measurement of center line and diameter in 3d curvilinear structures},
+  journal = {International Journal of Computer Vision},
+  year = {2001},
+  volume = {42},
+  number = {3},
+  pages = {177-189}
+}
+@article{Jares-Erijman1996,
+  author = {Jares-Erijman, E.A. and Jovin, T.M.},
+  title = {Determination of DNA Helical Handedness by Fluorescence Resonance Energy Transfer},
+  journal = {Journal of Molecular Biology},
+  year = {1996},
+  volume = {257},
+  number = {3},
+  pages = {597-617}
+}
+@article{Dologlou1991,
+  author = {Dologlou, I. and Carayannis, G.},
+  title = {Physical Interpretation of Signal Reconstruction from Reduced Rank Matrices},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1991},
+  volume = {39},
+  number = {7},
+  pages = {1681--1682},
+  month = {July}
+}
+@article{Dologlou1996,
+  author = {Dologlou, I. and Pesquet, J.-C. and Skowronski, J.},
+  title = {Projection-based Rank Reduction Algorithms for Multichannel Modeling and Image Compression},
+  journal = {Signal Processing},
+  year = {1996},
+  volume = {48},
+  number = {2},
+  pages = {97--109}
+}
+@article{Sethi1987,
+  author = {Sethi, I.K. and Jain, R. },
+  title = {Finding trajectories of feature points in monocular image sequences},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1987},
+  volume = {9},
+  pages = {56--73}
+}
+@phdthesis{Whitaker1993a,
+  author = {Whitaker, R.T.},
+  title = {Geometry-Limited Diffusion},
+  year = {1993},
+  school = {The University of North Carolina, Chapel Hill, North Carolina}
+}
+@article{Unser1995a,
+  author = {Unser, Michael and Aldroubi, Akram and Eden, Murray},
+  title = {Enlargement or reduction of digital images with minimum loss of information},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1995},
+  volume = {4},
+  number = {3},
+  pages = {247-258}
+}
+@article{Hubel1962,
+  author = {Hubel, D.H. and Wiesel, T.N.},
+  title = {Receptive fields, binocular interaction and functional architecture in the cat's visual cortex},
+  journal = {The Journal of Physiology},
+  year = {1962},
+  volume = {160},
+  pages = {106-154}
+}
+@article{Young1985,
+  author = {Young, I.T.},
+  title = {Estimation of Sampling Errors},
+  journal = {Cytometry},
+  year = {1985},
+  volume = {6},
+  pages = {273--275}
+}
+@phdthesis{Nordberg1994a,
+  author = {Nordberg, K.},
+  title = {Signal Representation and Processing using Operator Groups},
+  year = {1994},
+  address = {{Link\"oping}, Sweden},
+  school = {{Link\"oping University}}
+}
+@article{Young1988,
+  author = {Young, I.T.},
+  title = {Sampling Density and Quantitative Microscopy},
+  journal = {Analytic and Quantitative Cytology Histology},
+  year = {1988},
+  volume = {10},
+  number = {4},
+  pages = {269--275}
+}
+@article{Alvarez1992,
+  author = {Alvarez, L. and Lions, P. and Morel, J.},
+  title = {Image selective smoothing and edge detection by nonlinear diffusion {II}},
+  journal = {SIAM J. Numer. Anal.},
+  year = {1992},
+  volume = {29},
+  number = {3},
+  pages = {845--866},
+  month = {June}
+}
+@article{Deriche1990,
+  author = {Deriche, R.},
+  title = {Fast Algorithms for Low-Level Vision},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1990},
+  volume = {12},
+  number = {1},
+  pages = {78--87},
+  month = {January}
+}
+@article{Sartor2001,
+  author = {Sartor, L. J. and Weeks, A. R.},
+  title = {Morphological Operations on Color Images},
+  journal = {Journal of Electronic Imaging},
+  year = {2001},
+  volume = {10},
+  number = {2},
+  pages = {548-559}
+}
+@article{Rohr1997,
+  author = {Rohr, K.},
+  title = {On 3D Differential Operators for Detecting Point Landmarks},
+  journal = {Image and Vision Computing},
+  year = {1997},
+  volume = {15},
+  pages = {219--233}
+}
+@inproceedings{Luengo1999,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Resolution Enhancement of a Sequence of Undersampled Shifted Images},
+  year = {1999},
+  pages = {95--102},
+  editor = {Boasson, M. and Kaandorp, J.A. and Tonino, J.F.M. and Vosselman, M.G.},
+  booktitle = {ASCI'99, Proc. 5th Annual Conference of the Advanced School for Computing and Imaging (Heijen, The Netherlands)},
+  organization = {ASCI, Delft}
+}
+@article{Sandberg2003,
+  author = {Sandberg, K. and Mastronarde, D.N. and Beylkin, G.},
+  title = {A fast reconstruction algorithm for electron microscope tomography},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {144},
+  pages = {61-72}
+}
+@article{Grigorieff1998,
+  author = {Grigorieff, N.},
+  title = {Three-dimensional Structure of Bovine {NADH}:Ubiquinone Oxidoreductase (Complex {I}) at {22\AA} in Ice},
+  journal = {Journal of Molecular Biology},
+  year = {1998},
+  volume = {277},
+  pages = {1033-1046}
+}
+@inproceedings{Smith1984,
+  author = {Smith, M.J. and Barnwell, T.P.},
+  title = {A Procedure for Designing Exact Reconstruction Filter Banks for Tree Structured Sub-Band Coders},
+  year = {1984},
+  pages = {27.1.1--27.1.4},
+  month = {March},
+  address = {San Diego, U.S.A.},
+  booktitle = {Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing}
+}
+@article{Santos2000,
+  author = {Santos, A. and Young, I.T.},
+  title = {Model-based resolution - applying the theory in quantitative microscopy},
+  journal = {Applied Optics},
+  year = {2000},
+  volume = {39},
+  number = {17},
+  pages = {2948-2958}
+}
+@article{Vossepoel1988,
+  author = {Vossepoel, A.M.},
+  title = {A note on distance transformations in digital images},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1988},
+  volume = {43},
+  pages = {88-97}
+}
+@article{Garboczi1995,
+  author = {Garboczi, E.J. and Snyder, K.A. and Douglas, J.F. and Thorpe, M.F.},
+  title = {Geometrical percolation threshold of overlapping ellipsoids},
+  journal = {Physical Review E},
+  year = {1995},
+  volume = {52},
+  number = {1},
+  month = {July}
+}
+@article{Wu2000,
+  author = {Wu, L. and Zhu, Y. and Tafto, J.},
+  title = {Picometer Accuracy in Measuring Lattice Displacements Across Planar Faults by Interferometry in Coherent Electron Diffraction},
+  journal = {Physical Review Letters},
+  year = {2000},
+  volume = {85},
+  number = {24},
+  pages = {5126-5129}
+}
+@article{Vossepoel1982,
+  author = {Vossepoel, A.M. and Smeulders, A.W.M.},
+  title = {Vector code probability and metrication error in the representation of straight lines of finite length},
+  journal = {Computer Graphics and Image Processing},
+  year = {1982},
+  volume = {20},
+  pages = {347-364}
+}
+@article{Lazar2003,
+  author = {Lazar, S. and Botton, G.A. and Wu, M.-Y. and Tichelaar, F.D. and Zandbergen, H.W.},
+  title = {Materials science applications of {HREELS} in near edge structure analysis and low-energy loss spectroscopy},
+  journal = {Ultramicroscopy},
+  year = {2003},
+  volume = {96},
+  pages = {533-546}
+}
+@article{Muller1995,
+  author = {Muller, D.A. and Silcox, J.},
+  title = {Delocalization in inelastic scattering},
+  journal = {Ultramicroscopy},
+  year = {1995},
+  volume = {59},
+  pages = {195-213}
+}
+@mastersthesis{Brusse1995,
+  author = {Brusse, H.},
+  title = {Quantitative structuuranalyse van aardlagen op basis van boorgatbeelden},
+  year = {1995},
+  month = {August},
+  school = {Delft University of Technology},
+  note = {in {D}utch}
+}
+@book{JAEHNE,
+  author = {{J\"ahne}, B.},
+  title = {Practical Handbook on Image Processing for Scientific Applications},
+  year = {1997},
+  publisher = {CRC Press},
+  address = {New York}
+}
+@article{Lazar2004,
+  author = {Lazar, S. and {H\'ebert}, C. and Zandbergen, H.W.},
+  title = {Investigation of hexagonal and cubic {GaN} by high-resolution electron energy-loss spectroscopy and density functional theory},
+  journal = {Ultramicroscopy},
+  year = {2004},
+  volume = {98},
+  pages = {249-257}
+}
+@article{Huang1998,
+  author = {Huang, N.E. and Shen, Z. and Long, S.R. and Wu, M.C. and Shih, H.H. and Zheng, Q. and Yen, N.-C. and Tung, C.C. and Liu, H.H.},
+  title = {The Empirical Mode Decomposition and the {Hilbert} Spectrum for Nonlinear and Non-stationary Time Series Analysis},
+  journal = {Proceedings of the Royal Society of London A},
+  year = {1998},
+  volume = {454},
+  pages = {903--995}
+}
+@article{Huang1995,
+  author = {Huang, C.-L. and Chen, Y.-T.},
+  title = {Motion Estimation method using a 3D steerable filter},
+  journal = {Image and Vision Computing},
+  year = {1995},
+  volume = {13},
+  number = {1},
+  pages = {21--32},
+  month = {February}
+}
+@article{Peh2002,
+  author = {Peh, C.-H. and Loong-Fah Cheong},
+  title = {Synergizing spatial and temporal texture},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2002},
+  volume = {11},
+  number = {10},
+  pages = {1179--1191}
+}
+@article{Lee1983,
+  author = {Lee, J.-S.},
+  title = {Digital Image Smoothing and the Sigma Filter},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1983},
+  volume = {24},
+  pages = {255--270}
+}
+@inproceedings{Buhr2003,
+  author = {Buhr, E. and {G\"unther}-Kohfahl, S. and Neitzel, U.},
+  title = {Simple method for modulation transfer function determination of digital imaging detectors from edge images},
+  year = {2003},
+  volume = {5030,3},
+  month = {16-18 February},
+  address = {San Diego, California, USA},
+  booktitle = {Proceedings of SPIE}
+}
+@inproceedings{Lee1984,
+  author = {Lee, B.G.},
+  title = {{FCT} - a fast cosine transform},
+  year = {1984},
+  pages = {28A.3.1-28A.3.4},
+  booktitle = {Proc. IEEE ICASSP},
+  annote = {key_fft}
+}
+@article{Feret1931,
+  author = {Feret, L.R.},
+  title = {La Grosseur des Grains},
+  journal = {Assoc. Intern. Essais Math. 2D, Zurich},
+  year = {1931}
+}
+@article{Bunt2004,
+  author = {Bunt, G. and Wouters, F.S.},
+  title = {Visualization of Molecular Activities Inside Living Cells with Fluorescent Labels},
+  journal = {International Review of Cytology},
+  year = {2004},
+  volume = {237},
+  pages = {205-280}
+}
+@article{Vaidyanathan1987,
+  author = {Vaidyanathan, P.P.},
+  title = {Quadrature Mirror Filter Banks, M-Band Extensions and Perfect-Reconstruction Techniques},
+  journal = {IEEE Acoustics, Speech, and Signal Processing Magazine},
+  year = {1987},
+  volume = {4},
+  number = {3},
+  pages = {4--20},
+  month = {July}
+}
+@inproceedings{Knutsson2003,
+  author = {Knutsson, H. and Anderson, M.},
+  title = {Loglets: Generalized Quadrature and Phase for Local Spatio-Temporal Structure Estimation},
+  year = {2003},
+  pages = {741-748},
+  month = {June 29 -July 2},
+  editor = {{Big\"un}, J. and Gustavsson, T.},
+  publisher = {Springer-Verlag},
+  series = {LNCS 2749},
+  address = {Berlin},
+  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden) }
+}
+@article{Mokhtarian1992,
+  author = {Mokhtarian, F. and Machworth, A.K.},
+  title = {A Theory of Multiscale, Curvature-Based Shape Representation for Planar Curves},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Analysis},
+  year = {1992},
+  volume = {14},
+  number = {8},
+  pages = {789--805},
+  month = {August}
+}
+@article{Lin1986,
+  author = {Lin, J.A. and Cowley, J.M.},
+  title = {Calibration of the operating parameters for an {HB5 STEM} instrument},
+  journal = {Ultramicroscopy},
+  year = {1986},
+  volume = {19},
+  pages = {31-42}
+}
+@article{Zack1977,
+  author = {Zack, G.W. and Rogers, W.E. and Latt, S.A.},
+  title = {Automatic Measurement of Sister Chromatid Exchange Frequency},
+  journal = {Journal of Histochemistry and Cytochemistry},
+  year = {1977},
+  volume = {25},
+  number = {7},
+  pages = {741--753}
+}
+@article{Bewersdorf2006,
+  author = {Bewersdorf, J. and Schmidt, R. and Hell, S.W.},
+  title = {Comparison of {I$^5$M} and {4Pi}-microscopy},
+  journal = {Journal of Microscopy},
+  year = {2006},
+  volume = {222},
+  pages = {105-117}
+}
+@inproceedings{Leung1998,
+  author = {Leung, T. and Malik, J.},
+  title = {Contour Continuity in Region Based Image Segmentation},
+  year = {1998},
+  month = {June},
+  booktitle = {5th. Euro. Conf. Computer Vision, Freiburg, Germany }
+}
+@article{Kempen2000,
+  author = {Kempen, G.M.P. van and Vliet, L.J. van},
+  title = {Background estimation in nonlinear image restoration},
+  journal = {Journal of the Optical Society of America},
+  year = {2000},
+  volume = {17},
+  number = {3},
+  pages = {425-434}
+}
+@article{Nellist2004,
+  author = {Nellist, P.D. and Chisholm, M.F. and Dellby, N. and Krivanek, O.L. and Murfitt, M.F. and Szilagyi, Z.S. and Lupini, A.R. and Borisevick, A. and Sides, W.H. jr. and Pennycook, S.J. },
+  title = {Direct Sub-Angstrom Imaging of a Crystal Lattice},
+  journal = {Science},
+  year = {2004},
+  volume = {305},
+  pages = {1741}
+}
+@article{Liu1997,
+  author = {S-C. Liu and S. Chang},
+  title = {Dimension Estimation of Discrete-Time Fractional Brownian Motion with Application to Image Texture Classification},
+  journal = {IEEE Transaction on Image Processing},
+  year = {1997},
+  volume = {6},
+  number = {8},
+  pages = {1176-1184}
+}
+@article{Keenan2004,
+  author = {Keenan, M.R. and Kotula, P.G.},
+  title = {Accounting for Poisson noise in the multivariate analysis of {ToF-SIMS} spectrum images},
+  journal = {Surface and Interface Analysis},
+  year = {2004},
+  volume = {36},
+  number = {3},
+  pages = {203-212}
+}
+@book{Gelfand1964,
+  author = {{Gel'fand}, I.M. and Shilov, G.E.},
+  title = {Generalized Functions. Volume 1, Properties and Operations},
+  year = {1964},
+  publisher = {Academic Press}
+}
+@book{Gelfand1966,
+  author = {{Gel'fand}, I.M. and Graev, M.I. and Vilenkin, N.Ya.},
+  title = {Generalized Functions. Volume 5, Integral Geometry and Representation Theory},
+  year = {1966},
+  publisher = {Academic Press}
+}
+@techreport{Lindeberg1998b,
+  author = {Lindeberg, T.},
+  title = {Principles for Automatic Scale Selection},
+  year = {1998},
+  number = {ISRN KTH/NA/P-98/14-SE},
+  month = {August},
+  address = {Stockholm, Sweden},
+  institution = {Computational Vision and Active Perception Laboratory, Royal Institute of Technology}
+}
+@article{Lindeberg1998a,
+  author = {Lindeberg, T.},
+  title = {Edge Detection and Ridge Detection with Automatic Scale Selection},
+  journal = {International Journal of Computer Vision},
+  year = {1998},
+  volume = {30},
+  number = {2},
+  pages = {117--154}
+}
+@article{Koenderink1999,
+  author = {Koenderink, J.J. and Doorn, A.J. van},
+  title = {The Structure of Locally Orderless Images},
+  journal = {International Journal of Computer Vision},
+  year = {1999},
+  volume = {31},
+  number = {2/3},
+  pages = {159--168}
+}
+@inproceedings{Kalitzin1997,
+  author = {Kalitzin, S.N. and ter Haar Romeny, B.M. and Viergever, M.A.},
+  title = {Invertible Orientation Bundles on 2D Scalar Images},
+  year = {1997},
+  pages = {77--88},
+  month = {July},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes in Computer Science},
+  booktitle = {Proceedings of the First International Conference on Scale-Space Theory in Computer Vision}
+}
+@article{Koenderink1992,
+  author = {Koenderink, J.J. and Doorn, A.J. van},
+  title = {Generic Neighborhood Operators},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1992},
+  volume = {14},
+  number = {6},
+  pages = {597--605},
+  month = {June}
+}
+@article{Koenderink1990,
+  author = {Koenderink, J.J. and Doorn, A.J. van},
+  title = {Receptive Field Families},
+  journal = {Biological Cybernetics},
+  year = {1990},
+  volume = {63},
+  pages = {291--297}
+}
+@inproceedings{Haussecker1996,
+  author = {{Hau\ss ecker}, H. and {J\"ahne}, B.},
+  title = {A Tensor Approach for Local Structure Analysis in Multi-Dimensional Images},
+  year = {1996},
+  pages = {171--178},
+  month = {November 18--19},
+  editor = {Girod, B. and Niemann, H. and Seidel, H.-P.},
+  series = {Proceedings in Artificial Intelligence 3},
+  booktitle = {Proceedings 3D Image Analysis and Synthesis},
+  organization = {{Universit\"at} Erlangen-{N\"urnberg}}
+}
+@article{Kalitzin1999,
+  author = {Kalitzin, S.N. and Haar Romeny, B. ter and Viergever, M.A.},
+  title = {Invertible Apertured Orientation filters in Image Analysis},
+  journal = {International Journal of Computer Vision},
+  year = {1999},
+  volume = {31},
+  number = {2/3},
+  pages = {145--158}
+}
+@inproceedings{Haussecker1997,
+  author = {{Hau\ss ecker}, H. and {J\"ahne}, B.},
+  title = {A tensor approach for precise computation of dense displacement vector fields},
+  year = {1997},
+  pages = {199--208},
+  month = {September 15-17},
+  editor = {Paulus, E. and Wahl, F.M.},
+  publisher = {Springer},
+  series = {Informatik Aktuell},
+  booktitle = {Proc. Mustererkennung 1997 (Braunschweig, Germany)}
+}
+@inproceedings{Vliet1993a,
+  author = {Vliet, L.J. van and Verbeek, P.W.},
+  title = {Curvature and Bending Energy in Digitized 2D and 3D Images},
+  year = {1993},
+  pages = {1403--1410},
+  booktitle = {8th Scandinavian Conference on Image Analysis, {Troms\o } Norway}
+}
+@article{Cam1994,
+  author = {Cam, E. le and Fack, F. and Menissier-de Murcia, J. and Cognet, J.A.H. and Barbin, A. and Sarantoglou, V. and Revet, B. and Delain, E. and Murcia, G. de},
+  title = {Conformational Analysis of a 139 Base-pair {DNA} Fragment Containing a Single-stranded Break and Its Interaction with {Human Poly(ADP-ribose)} Polymerase},
+  journal = {Journal of Molecular Biology},
+  year = {1994},
+  volume = {235},
+  number = {3},
+  pages = {1062-1071}
+}
+@article{Digman2005,
+  author = {Digman, M.A. and Sengupta, P. and Wiseman, P.W. and Brown, C.M. and Howritz, A.R. and Grattown, E.},
+  title = {Fluctuation correlation spectroscopy with a laser-scanning microscope: exploiting the hidden time structure},
+  journal = {Biophysical Journal - Biophysical Letters},
+  year = {2005}
+}
+@article{Bangham1996a,
+  author = {Bangham, J.A. and Ling, P.D. and Harvey, R.},
+  title = {Scale-Space From Nonlinear Filters},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1996},
+  volume = {18},
+  number = {5},
+  pages = {520--528}
+}
+@article{Talbot2000,
+  author = {Talbot, H. and Lee, T. and Jeulin, D. and Hanton, D. and Hobbs, L.W.},
+  title = {Image Analysis of Insulation Mineral Fibres},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {200, Pt 3},
+  pages = {251--268},
+  month = {December}
+}
+@article{Dietrich2004,
+  author = {Dietrich, H.R.C. and Knoll, J. and Doel, L.R. van den and Dedem, G.W.K. van and Daran-Lapujade, P.A.S. and Vliet, L.J. van and Moerman, R. and Pronk, J.R. and Young, I.T.},
+  title = {Nanoarrays: A Method for Performing Enzymatic Assays},
+  journal = {Analytical Chemistry},
+  year = {2004},
+  volume = {76},
+  number = {14},
+  pages = {4112-4117}
+}
+@inproceedings{Laptev2003,
+  author = {Laptev, I. and Lindeberg, T.},
+  title = {Interest point detection and scale-selection in space-time},
+  year = {2003},
+  volume = {2695},
+  pages = {372-387},
+  editor = {Griffin, L.D. and Lillholm, M.},
+  series = {Lecture Notes on Computer Science },
+  address = {Isle of Skye, United Kingdom},
+  booktitle = {Proceedings of the fourth Int. Conf. on Scale Space}
+}
+@article{Thomson1982,
+  author = {Thomson, D.J.},
+  title = {Spectrum Estimation and Harmonic Analysis},
+  journal = {Proceedings of the IEEE},
+  year = {1982},
+  volume = {70},
+  number = {9},
+  pages = {1055--1096},
+  month = {September}
+}
+@misc{Dorst1999a,
+  author = {Dorst, L.},
+  title = {{Clifford} Algebra: a Practical Tool for Efficient Geometrical Representation},
+  year = {1999},
+  note = {Tutorial presentation}
+}
+@phdthesis{Hansen1995,
+  author = {Hansen, M.B.},
+  title = {Spatial Statistics for Network Structures in Processed Milk},
+  year = {1995},
+  address = {Copenhagen, Denmark},
+  school = {The Royal Veterinary and Agricultural University Copenhagen}
+}
+@article{Hansen1999,
+  author = {Hansen, M.B. and Baddeley, A.J. and Gill, R.D.},
+  title = {First Contact Distributions for Spatial Patterns: Regularity and Estimation},
+  journal = {Advances in Applied Probability},
+  year = {1999},
+  volume = {31},
+  number = {1},
+  pages = {15--33}
+}
+@article{Stockman1977,
+  author = {Stockman, G.C. and Agrawala, A.K.},
+  title = {Equivalence of {Hough} Curve Detection to Template Matching},
+  journal = {Communications of the {ACM}},
+  year = {1977},
+  volume = {20},
+  number = {11},
+  pages = {820--822},
+  annote = {key_radon}
+}
+@article{Li1994a,
+  author = {Li, B.C. and Ma, S.D.},
+  title = {Approximation of an Arbitrary Filter and its Recursive Implementation},
+  journal = {Pattern Recognition},
+  year = {1994},
+  volume = {27},
+  number = {12},
+  pages = {1767--1774}
+}
+@article{Endres1997,
+  author = {Endres, A.L. and Knight, R.J.},
+  title = {Incorporating Pore Geometry and Fluid Pressure Communication into Modeling the Elastic Behavior of Porous Rocks},
+  journal = {Geophysics},
+  year = {1997},
+  volume = {62},
+  number = {1},
+  pages = {106--117},
+  month = {January/February}
+}
+@article{Hansen1997,
+  author = {Hansen, K. and Andersen, J.D.},
+  title = {Understanding the {Hough} Transform: {Hough} Cell Support and its Utilization},
+  journal = {Image and Vision Computing},
+  year = {1997},
+  volume = {15},
+  number = {3},
+  pages = {205--218}
+}
+@article{Maxwell1870,
+  author = {Maxwell, J.C.},
+  title = {On Hills and Dales},
+  journal = {The London, Edinburgh, and Dublin Philosophical Magazine and Journal of Science},
+  year = {1870},
+  volume = {40},
+  number = {269},
+  pages = {421--427}
+}
+@article{Qian2000,
+  author = {Qian, H. and Elson, E.L.},
+  title = {Single-Particle Tracking: Brownian Dynamics of Viscoelastic Materials},
+  journal = {Biophysical Journal},
+  year = {2000},
+  volume = {79},
+  pages = {137-143}
+}
+@article{Jain2000,
+  author = {Jain, A.K. and Duin, R.P.W. and Mao, J.},
+  title = {Statistical Pattern Recognition: A Review},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2000},
+  volume = {22},
+  number = {1},
+  pages = {4--37}
+}
+@article{Watson1953,
+  author = {Watson, J.D. and Crick, F.H.C.},
+  title = {Molecular Structure of Nucleic Acids},
+  journal = {Nature},
+  year = {1953},
+  volume = {171},
+  number = {4356},
+  pages = {737--738},
+  month = {April}
+}
+@inproceedings{Knutsson1989kort,
+  author = {Knutsson, H.},
+  title = {Representing Local Structure Using Tensors },
+  year = {1989},
+  pages = {244--251},
+  booktitle = {SCIA'89}
+}
+@article{Chadoeuf2000,
+  author = {Chadoeuf, J. and Brix, A. and Pierret, A. and Allard, D.},
+  title = {Testing Local Dependence of Spatial Structures on Images},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {200, Pt 1},
+  pages = {32--41},
+  month = {October}
+}
+@article{Brock2003,
+  author = {Brock, R. and Jovin, T.M. },
+  title = {Quantitative image analysis of cellular protein translocation induced by magnetic microspheres: Application to the EGF receptor},
+  journal = {Cytometry Part A},
+  year = {2003},
+  volume = {52A},
+  pages = {1-11}
+}
+@article{Costes2004,
+  author = {Costes, S.V. and Daelemans, D. and Cho, E.H. and Dobbin, Z. and Pavlakis, G. and Lockett, S.},
+  title = {Automatic and Quantitative Measurement of Protein-Protein Colocalization in Live Cells},
+  journal = {Biophysical Journal},
+  year = {2004},
+  volume = {86},
+  pages = {3993-4003}
+}
+@article{Zhou2003,
+  author = {Zhou, Z.H. and Zhang, H. and Jakana, J. and Lu, X.-Y. and Zhang, J.-Q.},
+  title = {Cytoplasmic Ployhedrosis Virus Structure at 8 by Electron Cryomicroscopy: Structural Basis of Capsid Stability and {mRNA} Processing Regulation},
+  journal = {Structure},
+  year = {2003},
+  volume = {1},
+  pages = {651-663}
+}
+@article{Zhou2000,
+  author = {Zhou, Z.H. and Dougherty, M. Jakana, J. and He, J. and Rixon, F.J. and Chiu, W.},
+  title = {Seeing the Herpesvirus Capsid at 8.5},
+  journal = {Science},
+  year = {2000},
+  volume = {288},
+  pages = {877-880}
+}
+@article{Zhou2001,
+  author = {Zhou, Z.H. and McCarthy, D.B. and O'Conor, C.M. and Reed, L.J. and Stoops, J.K.},
+  title = {The remarkable structural and functional organization of the eukaryotic pyruvate dehydrogenase complexes},
+  journal = {Proceedings of the National Academy of Sciences of the United States of America},
+  year = {2001},
+  volume = {98},
+  number = {26},
+  pages = {14802-14807}
+}
+@article{Medintz2004,
+  author = {Medintz, I.L. and Trammell, S.A. and Mattoussi, H. and Mauro, J.M.},
+  title = {Reversible Modulation of Quantum Dot Photoluminescence Using a Protein- Bound Photochromic Fluorescence Resonance Energy Transfer Acceptor},
+  journal = {Journal of the American Chemical Society},
+  year = {2004},
+  volume = {126},
+  pages = {30-31}
+}
+@article{Cherny2005,
+  author = {Cherny, D.I. and Brzdov4, M. and Pale\v{c}ek, J. and Pale\v{c}ek, E. and Jovin, T.M.},
+  title = {Sequestering of p53 into {DNA}-protein filaments revealed by electron microscopy},
+  journal = {Biophysical Chemistry},
+  year = {2005},
+  volume = {114},
+  number = {3},
+  pages = {261-271}
+}
+@article{Cherny2004,
+  author = {Cherny, D.I. and Hoyer, W. and Subramaniam, V. and Jovin, T.M.},
+  title = {Double-stranded {DNA} stimulates the fibrillation of $\alpha$-synuclein in vitro and is associated with the mature fibrils: An electron microscopy study},
+  journal = {Journal of Molecular Biology},
+  year = {2004},
+  volume = {344},
+  number = {4},
+  pages = {929-938}
+}
+@article{Cherny2001,
+  author = {Cherny, D.I. and Jovin, T.M.},
+  title = {Electron and scanning force microscopy studies of alterations in supercoiled {DNA} tertiary structure},
+  journal = {Journal of Molecular Biology},
+  year = {2001},
+  volume = {313},
+  number = {2},
+  pages = {295-307}
+}
+@article{Comer1999,
+  author = {Comer, M. L. and Delp, E. J.},
+  title = {Morphological Operations for Color Image Processing},
+  journal = {Journal of Electronic Imaging},
+  year = {1999},
+  volume = {8},
+  number = {3},
+  pages = {279-189}
+}
+@inproceedings{Farnebaeck2000,
+  author = {G. {Farneb\"ack}},
+  title = {Fast and {A}ccurate {M}otion {E}stimation using {O}rientation {T}ensors and {P}arametric {M}otion {M}odels},
+  year = {2000},
+  volume = {1},
+  pages = {135--139},
+  month = {September},
+  address = {Barcelona, Spain},
+  booktitle = {Proceedings of 15th International Conference on Pattern Recognition},
+  organization = {IAPR},
+  annote = {Also as Technical Report LiTH-ISY-R-2254}
+}
+@inproceedings{Farnebaeck2003,
+  author = {{Farneb\"ack}, G.},
+  title = {Two-Frame Motion Estimation Based on Polynomial Expansion},
+  year = {2003},
+  pages = {363-370},
+  month = {June 29 -July 2},
+  editor = {{Big\"un}, J. and Gustavsson, T.},
+  publisher = {Springer-Verlag},
+  series = {LNCS 2749},
+  address = {Berlin},
+  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden) }
+}
+@article{Freitag2005,
+  author = {Freitag, B. and Kujawa, S. and Mul, P.M. and Ringnalda, J. and Tiemeijer, P.C.},
+  title = {Breaking the spherical and chromatic aberration barrier in transmission electron microscopy},
+  journal = {Ultramicroscopy},
+  year = {2005},
+  volume = {102},
+  pages = {209-214}
+}
+@article{Lidke2005,
+  author = {Lidke, K.A. and Rieger, B. and Lidke, D.S. and Jovin, T.M.},
+  title = {The role of photon statistics in fluorescence anisotropy imaging},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2005},
+  volume = {14},
+  number = {9},
+  pages = {1237-1245}
+}
+@article{Lidke2003,
+  author = {Lidke, D.S. and Nagy, P. and Barisas, B.G. and Heintzmann, R. and Post, J.N. and Lidke, K.A. and Clayton, A.H.A. and Arndt-Jovin, D.J. and Jovin, T.M.},
+  title = {Imaging molecular interactions in cells by dynamic and static fluorescence anisotropy ({rFLIM} and {emFRET})},
+  journal = {Biochemical Society Transactions},
+  year = {2003},
+  volume = {31},
+  number = {5},
+  pages = {1020-1027}
+}
+@article{Lidke2004,
+  author = {Lidke, D.S. and Nagy, P. and Heintzmann, R. and Arndt-Jovin, D.J. and Post, J.N. and Grecco, H. and Jares-Erijman, E.A. and Jovin, T.M.},
+  title = {Quantum dot ligands provide new insights into {erbB/HER} receptor-mediated signal transduction},
+  journal = {Nature Biotechnology},
+  year = {2004},
+  volume = {22},
+  number = {2},
+  pages = {198-203}
+}
+@article{Dubuc2001a,
+  author = {Dubuc, B. and Zucker, S.W.},
+  title = {Complexity, Confusion, and Perceptual Grouping. Part {II}: Mapping Complexity},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {2001},
+  volume = {15},
+  number = {1--2},
+  pages = {83--116}
+}
+@article{Larkin2001a,
+  author = {Larkin, K.G.},
+  title = {Natural Demodulation of Two-Dimensional Fringe Patterns. {II}. Stationary Phase Analysis of the Spiral Phase Quadrature Transform},
+  journal = {Journal of the Optical Society of America A},
+  year = {2001},
+  volume = {18},
+  number = {8},
+  pages = {1871--1881},
+  month = {August}
+}
+@article{Salden1998,
+  author = {Salden, A.H. and ter Haar Romeny, B.M. and Viergever, M.A. },
+  title = {Differential Integral Geometry of Linear Scale-Space},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1998},
+  volume = {9},
+  pages = {5--27}
+}
+@misc{Lehar1994,
+  author = {Lehar, S.},
+  title = {Harmonic Resonance in Visual Perception Suggests a Novel Form of Neural Communication},
+  year = {1994},
+  note = {Rejected. Department of Cognitive and Neural Systems, Center for Adaptive Systems, Boston, U.S.A.}
+}
+@techreport{Luengo2003d,
+  author = {Luengo Hendriks, C.L. and Ginkel, M. van and Vliet, L.J. van},
+  title = {Underestimation of the Radius in the Radon Transform for Circles and Spheres},
+  year = {2003},
+  month = {May},
+  institution = {Pattern Recognition Group, Delft University of Technology},
+  note = {Technical Report PH-2003-02}
+}
+@inproceedings{Luengo2003c,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Discrete Morphology with Line Structuring Elements},
+  year = {2003},
+  volume = {2756},
+  pages = {722-729},
+  editor = {Petkov, N. and Westenberg, M.A.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Berlin},
+  booktitle = {Computer Analysis of Images and Patterns, Proceedings of the Tenth International Conference, {\footnotesize CAIP} 2003}
+}
+@article{Stark1996,
+  author = {Stark, H. and Zemlin, F. and Boettcher, C.},
+  title = {Electron radiation damage to protein crystals of bacteriorhodopsin at different temperatures},
+  journal = {Ultramicroscopy},
+  year = {1996},
+  volume = {63},
+  pages = {75-70}
+}
+@inproceedings{Luengo2003b,
+  author = {Luengo Hendriks, C.L. and Ginkel, M. van and Verbeek, P.W. and Vliet, L.J. van},
+  title = {The Generalized Radon Transform: Sampling and Memory Considerations},
+  year = {2003},
+  volume = {2756},
+  pages = {681-688},
+  editor = {Petkov, N. and Westenberg, M.A.},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Berlin},
+  booktitle = {Computer Analysis of Images and Patterns, Proceedings of the Tenth International Conference, {\footnotesize CAIP} 2003}
+}
+@article{Cariolaro1998,
+  author = {Cariolaro, G. and Erseghe, T. and Kraniauskas, P. and Laurenti, N.},
+  title = {A Unified Framework for the Fractional {Fourier} Transform},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1998},
+  volume = {46},
+  number = {12},
+  pages = {3206--3219},
+  month = {December}
+}
+@article{Chen1977,
+  author = {Chen, W.-H. and Harrison Smith, C. and Fralick, S.C.},
+  title = {A Fast Computational Algorithm for the Discrete Cosine Transform},
+  journal = {IEEE Transactions on Communications},
+  year = {1977},
+  volume = {25},
+  number = {9},
+  pages = {1004--1009},
+  month = {September},
+  annote = {key_fft}
+}
+@article{Beckers1990,
+  author = {Beckers, A.L.D. and Smeulders, A.W.M.},
+  title = {The Probability of a Random Straight Line in Two and Three Dimensions},
+  journal = {Pattern Recognition Letters},
+  year = {1990},
+  volume = {11},
+  pages = {233--240}
+}
+@article{Aert2002a,
+  author = {Aert, S. van and Dekker, A.J. den and Dyck, D. van and Bos, A. van den},
+  title = {Optimal experimental design of {STEM} measurement of atom column positions},
+  journal = {Ultramicroscopy},
+  year = {2002},
+  volume = {90},
+  pages = {273-289}
+}
+@article{Mallat1989,
+  author = {Mallat, S.G.},
+  title = {A Theory for Multiresolution Signal Decomposition: The Wavelet Representation},
+  journal = {IEEE Transaction on Pattern Analysis and Machine Intelligence},
+  year = {1989},
+  volume = {11},
+  number = {7},
+  pages = {674--693},
+  month = {July}
+}
+@book{Ripley1988,
+  author = {Ripley, B.D.},
+  title = {Statistical Inference for Spatial Processes},
+  year = {1988},
+  publisher = {Cambridge University Press}
+}
+@book{Landau1959,
+  author = {Landau, L.D. and Lifshitz, E.M.},
+  title = {Theory of Elasticity},
+  year = {1959},
+  publisher = {Pergamon Press},
+  edition = {first}
+}
+@article{Oudejans2000,
+  author = {Oudejans, R.R.D. and Verheijen, R. and Bakker, F.C. and Gerrits, J.C. and Steinbrcker, M. and Beek, P.J.},
+  title = {Errors in judging 'offside' in football},
+  journal = {Nature},
+  year = {2000},
+  volume = {404},
+  pages = {33}
+}
+@article{Kubinova2001,
+  author = {Kubinova, L. and Janacek, J.},
+  title = {Confocal Microscopy and Stereology: Estimating Volume, Number, Surface Area and Length by Virtual Test Probes Applied to Three-Dimensional Images},
+  journal = {Microscopy Research and Technique},
+  year = {2001},
+  volume = {53},
+  number = {6},
+  pages = {425--435}
+}
+@article{Duynhoven2003,
+  author = {Duynhoven, P.M. van and Kempen, G.M.P. van and Sluis, R. van and Rieger, B. and Weegels, P. and Vliet, L.J. van and Nicolay, K.},
+  title = {Quantitative Assessment of Gas Cell Development during the Proofing of Dough by Magnetic Resonance Imaging and Image Analysis},
+  journal = {Cereal Chemistry},
+  year = {2003},
+  volume = {80},
+  number = {4},
+  pages = {360-369}
+}
+@misc{DMD,
+  author = {Texas Instruments Technology},
+  title = {www.dlp.com}
+}
+@article{Merlin1975,
+  author = {Merlin, P.M. and Farber, D.J.},
+  title = {A Parallel Mechanism for Detecting Curves in Pictures},
+  journal = {IEEE Transactions on Computers},
+  year = {1975},
+  volume = {24},
+  pages = {96--98},
+  month = {January}
+}
+@inproceedings{Meyer1999,
+  author = {Meyer, Fernand and Maragos, Petros},
+  title = {Multiscale Morphological Segmentations Based on Watershed, Flooding, and Eikonal PDE},
+  year = {1999},
+  volume = {1682},
+  pages = {351--362},
+  month = {September},
+  editor = {Nielsen, Mads and Johansen, Peter and Olsen, Ole F. and Weickert, Joachim},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Berlin Heidelberg},
+  booktitle = {Scale-Space Theories in Computer Vision (Second International Conference, Scale-Space'99, Corfu, Greece)}
+}
+@article{Borgefors2003,
+  author = {Borgefors, G.},
+  title = {Weighted Digital Distance Transforms in Four Dimensions},
+  journal = {Discrete Applied Mathematics},
+  year = {2003},
+  volume = {125},
+  number = {1},
+  pages = {161--176}
+}
+@incollection{Proesmans1994,
+  author = {Proesmans, M. and Pauwels, P. and van Gool, L.},
+  title = {Coupled geometry-driven diffusion equations for low-level vision},
+  year = {1994},
+  pages = {191--228},
+  editor = {Ter Haar Romeny B.M.},
+  publisher = {Kluwer Academic Publishers},
+  chapter = {9},
+  booktitle = {Geometry-driven diffusion in computer vision}
+}
+@article{Smith1997,
+  author = {Smith, S.M., Brady J.M.},
+  title = {SUSAN - A New Approach to Low Level Image Processing},
+  journal = {International Journal of Computer Vision},
+  year = {1997},
+  volume = {23},
+  number = {1},
+  pages = {45--78}
+}
+@article{Catte1992,
+  author = {{Catt\'e}, F. and Lions, P. and Morel, J. and Coll, T.},
+  title = {Image selective smoothing and edge detection by nonlinear diffusion},
+  journal = {SIAM J. Numer. Anal.},
+  year = {1992},
+  volume = {29},
+  number = {1},
+  pages = {182--193},
+  month = {February}
+}
+@article{Radon1917,
+  author = {Radon, J.},
+  title = {{\"Uber} die {B}estimmung von {F}unktionen durch ihre {I}ntegralwerte {l\"angs} gewisser {M}annigfaltigkeiten},
+  journal = {Berichte {S\"achsische} Akademie der Wissenschaften, Leipzig, Mathematisch-Physikalische Klasse},
+  year = {1917},
+  volume = {69},
+  pages = {262--277}
+}
+@techreport{MuntheKaas1995,
+  author = {Munthe-Kaas, H. and Haveraaen, M.},
+  title = {Coordinate Free Numerics. Part 1: How to Avoid Index Wrestling in Tensor Computations},
+  year = {1995},
+  institution = {Department of Informatics, University of Bergen, Norway}
+}
+@inproceedings{Ginkel1999kort,
+  author = {Ginkel, M. van and Weijer, J. van de and Verbeek, P.W. and Vliet, L.J. van },
+  title = {Curvature Estimation from Orientation Fields },
+  year = {1999},
+  pages = {545--551 },
+  editor = {Ersboll, B.K. and Johansen, P. },
+  publisher = {Pattern Recognition Society of Denmark},
+  booktitle = {SCIA'99 }
+}
+@article{Squire1999,
+  author = {Squire, A. and Bastiaens, P.I.H.},
+  title = {Three Dimensional Image Restoration in Fluorescence Lifetime Imaging Microscopy},
+  journal = {Journal of Microscopy},
+  year = {1999},
+  volume = {193},
+  pages = {36--49}
+}
+@article{Larkin2005,
+  author = {Larkin, K.G.},
+  title = {Uniform estimation of orientation using local and nonlocal {2-D} energy operators},
+  journal = {Optics Express},
+  year = {2005},
+  volume = {13},
+  number = {20},
+  pages = {8097-8121}
+}
+@article{Babaud1986,
+  author = {Babaud, J. and Witkin, A.P. and Baudin, M. and Duda, R.O.},
+  title = {Uniqueness of the {G}aussian Kernel for Scale-Space Filtering},
+  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
+  year = {1986},
+  volume = {8},
+  number = {1},
+  pages = {26--33},
+  month = {January}
+}
+@article{Grossman1984,
+  author = {Grossman, A. and Morlet, J.},
+  title = {Decomposition of {Hardy} Functions into Square Integrable Wavelets of Constant Shape},
+  journal = {{SIAM} Journal on Mathematical Analysis},
+  year = {1984},
+  volume = {15},
+  number = {4},
+  pages = {723--736},
+  month = {July}
+}
+@article{OlivoMarin2002,
+  author = {Olivo-Marin, J.-C.},
+  title = {Extraction of Spots in Biological Images using Multiscale Products},
+  journal = {Pattern Recognition},
+  year = {2002},
+  volume = {35},
+  number = {9},
+  pages = {1989--1996},
+  month = {September}
+}
+@article{Larkin2001,
+  author = {Larkin, K.G. and Bone, D.J. and Oldfield, M.A.},
+  title = {Natural Demodulation of Two-Dimensional Fringe Patterns. {I}. General Background of the Spiral Phase Quadrature Transform},
+  journal = {Journal of the Optical Society of America A},
+  year = {2001},
+  volume = {18},
+  number = {8},
+  pages = {1862--1870},
+  month = {August}
+}
+@article{Nakajima2003,
+  author = {Nakajima, Y. and Inomata, H. and Nogawa, H. and Sato, Y. and Tamura, S. and Okazaki, K. and Torii, S.},
+  title = {Physics-based flow estimation of fluids},
+  journal = {Pattern Recognition},
+  year = {2003},
+  volume = {36},
+  pages = {1203-1212}
+}
+@article{Garini2005,
+  author = {Garini, Y. and Vermolen, B.J. and Young, I.T.},
+  title = {From micro to nano: recent advances in high-resolution microscopy},
+  journal = {Current Opinion in Biotechnology},
+  year = {2005},
+  volume = {16},
+  number = {1},
+  pages = {3-12}
+}
+@article{Duhamel1990,
+  author = {Duhamel. P. and Vetterli, M.},
+  title = {Fast {F}ourier transforms: a tutorial review and a state of the art},
+  journal = {Signal Processing},
+  year = {1990},
+  volume = {19},
+  pages = {259--299},
+  annote = {key_fft}
+}
+@article{Martinez2004,
+  author = {Martinez, G. and Tsuno, K.},
+  title = {Design of {Wien} filters with high resolution},
+  journal = {Ultramicroscopy},
+  year = {2004},
+  volume = {100},
+  pages = {105-114}
+}
+@inproceedings{Tanaka1986,
+  author = {Tanaka, A. and Kameyama, M. and Kazama, S. and Watanabe, O.},
+  title = {A Rotation Method for Raster Image Using Skew Transformation},
+  year = {1986},
+  pages = {272--277},
+  booktitle = {CVPR'86, IEEE Conference on Computer Vision and Pattern Recognition}
+}
+@article{Nyquist1928,
+  author = {Nyquist, H.},
+  title = {Certain Topics in Telegraph Transmission Theory},
+  journal = {Transactions of the AIEE},
+  year = {1928},
+  pages = {617--644},
+  note = {[reprinted in: Proceedings of the IEEE, vol. 90, no. 2, pp. 280-305, February 2002]}
+}
+@article{Thurnhofer1996,
+  author = {Thurnhofer, S. and Mitra, S.K.},
+  title = {A General Framework for Quadratic {V}olterra Filter for Edge Enhancement},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1996},
+  volume = {5},
+  number = {6},
+  pages = {950--963},
+  month = {June}
+}
+@article{Kybic2002,
+  author = {Kybic, J. and Blu, T. and Unser, M.},
+  title = {Generalized sampling: A variational approach - Part I: Theory},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {2002},
+  volume = {50},
+  number = {8},
+  pages = {1965--1976}
+}
+@article{Maybank1986,
+  author = {Maybank, S.J.},
+  title = {Optical Flow and the Taylor Expansion},
+  journal = {Pattern Recognition Letters},
+  year = {1986},
+  volume = {4},
+  pages = {243-246}
+}
+@inproceedings{Breen1996,
+  author = {Breen, E. J. and Jones, R.},
+  title = {An Attribute-Based Approach to Mathematical Morphology},
+  year = {1996},
+  pages = {41-48},
+  editor = {Maragos, P. and Schafer, R. W. and Akmal Butt, M.},
+  publisher = {Kluwer Academic Publishers},
+  address = {Boston},
+  booktitle = {Mathematical Morphology and its Applications to Image and Signal Processing}
+}
+@inproceedings{Ronse1986,
+  author = {Ronse, C.},
+  title = {Erosion of Narrow Image Features by Combination of Local Low Rank and Max Filters},
+  year = {1986},
+  pages = {77-81},
+  address = {London},
+  booktitle = {Proceedings of the Second IEE International Conference on Image Processing and its Applications}
+}
+@article{Khaneja1998,
+  author = {Khaneja, N. and Miller, M. I. and Grenander, U.},
+  title = {Dynamic Programming Generation of Curves on Brain Surfaces},
+  journal = {IEEE Transaction on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {11},
+  pages = {1260--1265}
+}
+@article{Nogales2001,
+  author = {Nogales, E. and Grigorieff, N.},
+  title = {Molecular Machines: Putting the Pieces Together},
+  journal = {Journal of Cell Biology},
+  year = {2--1},
+  volume = {152},
+  pages = {F1-F10}
+}
+@article{Campbell2001,
+  author = {Campbell, D.J. and Freidinger, E.R. and Querns, M.K.},
+  title = {Spontaneous Assembly of Magnetic {LEGO} Bricks},
+  journal = {The Chemical Educator},
+  year = {2001},
+  volume = {6},
+  number = {6},
+  pages = {321--323}
+}
+@article{Pike1995,
+  author = {Pike, R. and Presotto, D. and Dorward, S. and Flandrena, B. and Thompson, K. and Trickey, H. and Winterbottom, P.},
+  title = {Plan 9 from {Bell} Labs},
+  journal = {Computing Systems},
+  year = {1995},
+  volume = {8},
+  number = {3},
+  pages = {221--254}
+}
+@article{Jiang2003,
+  author = {Jiang, W. and Baker, M.L. and Wu, Q. and Bajaj, C. and Chiu, W.},
+  title = {Applications of a bilateral denoising filter in biological electron microscopy},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {144},
+  pages = {114-122}
+}
+@misc{Koenderink1988,
+  author = {Koenderink, J.J.},
+  title = {Image Structure},
+  year = {1988},
+  howpublished = {NATO ASI Series, vol. F39, Mathematics and Computer Science in Medical Imaging, Springer-Verlag}
+}
+@article{Back1997,
+  author = {Back, A. D. and Weigend, A. S.},
+  title = {A first application of independent component analysis to extracting structure from stock returns},
+  journal = {International Journal of Neural Systems},
+  year = {1997},
+  volume = {8},
+  number = {4},
+  pages = {473-484},
+  month = {Aug}
+}
+@article{Koenderink1984,
+  author = {Koenderink, J.J.},
+  title = {The Structure of Images},
+  journal = {Biological Cybernetics},
+  year = {1984},
+  volume = {50},
+  pages = {363--370}
+}
+@article{Koenderink1987,
+  author = {Koenderink, J.J. and Doorn, A.J. van},
+  title = {Representation of Local Geometry in the Visual System},
+  journal = {Biological Cybernetics},
+  year = {1987},
+  volume = {55},
+  pages = {367--375}
+}
+@article{Jarvis1976,
+  author = {Jarvis, J.F. and Roberts, C.S.},
+  title = {A New Technique for Displaying Continuous Tone Images on a Bilevel Display},
+  journal = {IEEE Transactions on Communications},
+  year = {1976},
+  pages = {891--898},
+  month = {August}
+}
+@article{Saito1994,
+  author = {Saito,T. and Toriwaki, J.},
+  title = {New algorithms for euclidean distance transformation of an n-dimensional digitized picture with applications},
+  journal = {Pattern Recognition},
+  year = {1994},
+  volume = {27},
+  number = {11},
+  pages = {1551-1565}
+}
+@article{Bonneau2005,
+  author = {Bonneau, S. and Dahan, M. and Cohnen, L.D.},
+  title = {Single Quantum Dot Tracking Based on Perceptual Grouping Using Minimal Paths in a Spatiotemporal Volume},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2005},
+  volume = {14},
+  number = {9},
+  pages = {1384-1395}
+}
+@inproceedings{Boomgaard2002a,
+  author = {Boomgaard, R. van den and Weijer, J. van de},
+  title = {Robust Estimation of Orientation for Texture Analysis},
+  year = {2002},
+  pages = {135-138},
+  month = {1 June},
+  address = {Copenhagen, Denmark},
+  booktitle = {Texture 2002, The 2nd international workshop on texture analysis and synthesis}
+}
+@article{Koenderink1988a,
+  author = {Koenderink, J.J. and Richards, W.},
+  title = {Two-dimensional Curvature Operators},
+  journal = {Journal of the Optical Society of America A},
+  year = {1988},
+  volume = {5},
+  number = {7},
+  pages = {1136--1141},
+  month = {July}
+}
+@article{Neher2004,
+  author = {Neher, R.A. and Neher, E.},
+  title = {Applying Spectral Fingerprinting to the Analysis of {FRET} Images},
+  journal = {Microscopy Research and Technique},
+  year = {2004},
+  volume = {64},
+  pages = {185-195}
+}
+@article{Wouters2001,
+  author = {Wouters, F.S. and Verveer, P.J. and Bastiaens, P.I.H.},
+  title = {Imaging biochemistry inside cells},
+  journal = {Trends in Cell Biology},
+  year = {2001},
+  volume = {11},
+  pages = {203-211}
+}
+@article{Einstein1905,
+  author = {Einstein, A.},
+  title = {{\"Uber} die von der molekularkinetischen {T}heorie der {W\"a}rme geforderte {B}ewegung von in ruhenden {Fl\"u}ssigkeiten suspendierten {T}eilchen},
+  journal = {Annalen der Physik},
+  year = {1905},
+  volume = {17},
+  pages = {549--560}
+}
+@article{Wimberly2000,
+  author = {Wimberly, B.T. and Brodersen, D.E. and Clemons, W.M. Jr. and Morgan-Warren, R.J. and Carter, A.P. and Vonrhein, C. and Hartsch, T. and Ramakrishnan, V.},
+  title = {Structure of the {30S} ribosomal subunit},
+  journal = {Nature},
+  year = {2005},
+  volume = {407},
+  pages = {327-339}
+}
+@article{Weickert1998,
+  author = {Weickert, J. and ter Haar Romeny, B.M. and Viergever, M.A. },
+  title = {Efficient and reliable schemes for nonlinear diffusion filtering},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1998},
+  volume = {7},
+  number = {3},
+  pages = {398--410}
+}
+@article{Lindeberg1990,
+  author = {Lindeberg, T.},
+  title = {Scale-Space for Discrete Signals},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1990},
+  volume = {12},
+  number = {3},
+  pages = {234--254}
+}
+@article{Nason2000,
+  author = {Nason, G.P. and Sachs, R. von and Kroisandt, G.},
+  title = {Wavelet Processes and Adaptive Estimation of the Evolutionary Wavelet Spectrum},
+  journal = {Journal of the Royal Statistical Society B},
+  year = {2000},
+  volume = {62},
+  pages = {271--292}
+}
+@article{Gibbons1975,
+  author = {Gibbons, P.C. and Ritsko, J.J. and Schnatterly, S.E.},
+  title = {Inelastic electron scattering spectrometer},
+  journal = {Review of Scientific Intstruments},
+  year = {1975},
+  volume = {46},
+  number = {11},
+  pages = {1546-1554}
+}
+@article{Bouma2005,
+  author = {Bouma, H. and Vilanova, A. and Vliet, L.J. van and Gerritsen, F.A.},
+  title = {Correction for the Dislocation of Curved Surfaces Caused by the {PSF} in {2D} and {3D} {CT} Images},
+  journal = {Ultramicroscopy},
+  year = {2005},
+  volume = {27},
+  number = {9},
+  pages = {1501-1507}
+}
+@book{Lindeberg1994,
+  author = {Lindeberg, T.},
+  title = {Scale-Space Theory in Computer Vision},
+  year = {1994},
+  publisher = {Kluwer}
+}
+@article{Ober2003,
+  author = {Ober, R.J. and Lin, Z. and Zou, Q.},
+  title = {Calculations of the Fisher information matrix for multidimensional data sets},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {2003},
+  volume = {51},
+  number = {10},
+  pages = {2679-2691}
+}
+@article{Mattfeldt2000,
+  author = {Mattfeldt, T. and Gottfried, H.-W. and Schmidt, V. and Kestler, H.A.},
+  title = {Classification of Spatial Textures in Benign and Cancerous Glandular Tissues by Stereology and Stochastic Geometry using Artificial Neural Networks},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {198, Pt 2},
+  pages = {143--158},
+  month = {May}
+}
+@article{Ober2004,
+  author = {Ober, R.J. and Ram, S. and Ward, S.E.},
+  title = {Localization Accuracy in Single-Molecule Microscopy},
+  journal = {Biophysical Journal},
+  year = {2004},
+  volume = {86},
+  number = {2},
+  pages = {1185-1200}
+}
+@article{Hummel1987,
+  author = {Hummel, R.A. and Kimia, B. and Zucker, S.W.},
+  title = {Deblurring Gaussian Blur},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1987},
+  volume = {38},
+  pages = {66--80}
+}
+@article{Hummel1989,
+  author = {Hummel, R. and Moniot, R.},
+  title = {Reconstructions from Zero Crossings in Scale Space},
+  journal = {IEEE Transactions on Acoustics, Speech and Signal Processing},
+  year = {1989},
+  volume = {37},
+  number = {12},
+  pages = {2111--2130},
+  month = {December}
+}
+@article{Pons1999,
+  author = {Pons, M.N. and Vivier, H. and Belaroui, K. and Bernard-Michel, B. and Cordier, F. and Oulahana, D. and Dodds, J.A. },
+  title = {Particle morphology: from cisulatisation to measurement},
+  journal = {Powder Technology},
+  year = {1999},
+  volume = {103},
+  pages = {44--57}
+}
+@inproceedings{Holmes1999,
+  author = {Holmes, A. and Taylor, C.},
+  title = {Developing a Measure of Similarity between Pixel Signatures},
+  year = {1999},
+  volume = {2},
+  pages = {614--623},
+  editor = {Pridmore, T. and Elliman, D.},
+  booktitle = {10th British Machine Vision Conference}
+}
+@article{Keys1981,
+  author = {Keys, R. G.},
+  title = {Cubic Convolution Interpolation for Digital Image Processing},
+  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
+  year = {1981},
+  volume = {29},
+  number = {6},
+  pages = {1153-1160}
+}
+@inproceedings{Hummel1986,
+  author = {Hummel, R.A.},
+  title = {Representation Based on Zero-crossings in Scale-Space},
+  year = {1986},
+  pages = {204--209},
+  booktitle = {IEEE Proceedings of the International Conference on Computer Vision and Pattern Recognition}
+}
+@article{Nielsen1997,
+  author = {Nielsen, N. and Florack, L. and Deriche, R.},
+  title = {Regularization, scale-space and edge-detection filters},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1997},
+  volume = {7},
+  number = {4},
+  pages = {291--307}
+}
+@inbook{Adam1968,
+  author = {Adam, G. and {Delbr\"uck}, M.},
+  title = {Structural Chemistry and Molecular Biology},
+  year = {1968},
+  pages = {198-215},
+  editor = {Rich, A. and Davidson, N. },
+  publisher = {Freeman},
+  address = {San Francisco, USA},
+  chapter = {Reduction of Dimensionality in Biological Diffusion Processes}
+}
+@article{Frontali1979,
+  author = {Frontali, C. and Dore, E. and Ferrauto, A. and Gratton, E. and Bettini, A. and Pozzan, M.R. and Valdevit, E.},
+  title = {An absolute method for the determination of the persistence length of native {DNA} from electron micrographs},
+  journal = {Biopolymers},
+  year = {1979},
+  volume = {18},
+  number = {6},
+  pages = {1353-1373}
+}
+@inbook{Thomas1963,
+  author = {Thomas, L.H.},
+  title = {Applications of Digital Computers},
+  year = {1963},
+  publisher = {Ginn and Co., Boston},
+  chapter = {Using Computers to Solve Problems in Physics}
+}
+@article{Yang2005,
+  author = {Yang, C. and Ng, E.G. and Penczek, P.A.},
+  title = {Unified {3-D} structure and projection orientation refinement using {quasi-Newton} algorithm},
+  journal = {Journal of Structural Biology},
+  year = {2005},
+  volume = {149},
+  pages = {53-64}
+}
+@article{Almeida1997,
+  author = {Almeida, M.P.},
+  title = {Anisotropic Textures with Arbitrary Orientation},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1997},
+  volume = {7},
+  pages = {241--251}
+}
+@mastersthesis{Okker2003,
+  author = {Okker, B.H.},
+  title = {Contour continuation using space variant mathematical morphology},
+  year = {2003},
+  month = {January},
+  school = {Delft University of Technology}
+}
+@article{Kempen2000a,
+  author = {Kempen, G.M.P. van and Vliet, L.J. van},
+  title = {Mean and Variance of Ratio Estimators Used in Fluorescence Ratio Imaging},
+  journal = {Cytometry},
+  year = {2000},
+  volume = {39},
+  number = {4},
+  pages = {300-305}
+}
+@article{Almeida1994,
+  author = {Almeida, L.B.},
+  title = {The Fractional {F}ourier Transform and Time-Frequency Representations},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1994},
+  volume = {42},
+  number = {11},
+  pages = {3084--3091},
+  month = {November}
+}
+@article{Malandain1998,
+  author = {Malandain, G. and {Fern\'andez-Vidal}, S.},
+  title = {Euclidean Skeletons},
+  journal = {Image and Vision Computing},
+  year = {1998},
+  volume = {16},
+  number = {5},
+  pages = {317--327}
+}
+@article{Hekrdla1986,
+  author = {Hekrdla, J.},
+  title = {Index Transforms of Multidimensional Cyclic Convolutions and Discrete {Fourier} Transforms},
+  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
+  year = {1986},
+  volume = {34},
+  number = {4},
+  pages = {996--996},
+  month = {August},
+  annote = {key_fft}
+}
+@article{Kues2001,
+  author = {Kues, T. and Peters, R. and Kubitscheck, U.},
+  title = {Visualization and Tracking of Single Protein Molecules in the Cell Nucleus},
+  journal = {Biophysical Journal},
+  year = {2001},
+  volume = {80},
+  number = {6},
+  pages = {2954-2967}
+}
+@article{Heilemann2002,
+  author = {Heilemann, M. and Herten, D.P. and Heintzmann, R. and Cremer, C. and {M\"uller}, C. and Tinnefeld, P. and Weston, K.D. and Wolfrum, J. and Sauer, M.},
+  title = {High-resolution colocalization of single dye molecules by fluorescence lifetime imaging microscopy},
+  journal = {Analytical Chemistry},
+  year = {2002},
+  volume = {74},
+  number = {14},
+  pages = {3511-3517}
+}
+@article{Kehtarnavaz1988,
+  author = {Kehtarnavaz, N. and Figueiredo, R.J.P. de},
+  title = {A 3-D contour segmentation scheme based on curvature and torsion},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1988},
+  volume = {10},
+  number = {5},
+  pages = {707--713},
+  month = {September}
+}
+@article{Gil1993,
+  author = {Gil, J. and Werman, M.},
+  title = {Computing {2-D} Min, Median, and Max Filters},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1993},
+  volume = {15},
+  number = {5},
+  pages = {504--507},
+  month = {May}
+}
+@article{Engel1981,
+  author = {Engel, J. and Odermatt, E. and Engel, A. and Madri, J.A. and Furthmayr, H. and Timpl, H.R.},
+  title = {Shapes, domain organizations and flexibility of laminin and fibronectin, two multifunctional proteins of the extracellular matrix},
+  journal = {Journal of Molecular Biology},
+  year = {1981},
+  volume = {150},
+  number = {1},
+  pages = {97-120}
+}
+@article{Ruiz2001,
+  author = {Ruiz, T. and {Koppenschl\"ager}, G. and Radermacher, M.},
+  title = {The first three-dimensional structure of phosphofructokinase from Saccharomyces cerevisiae determined by electron microscopy of single particles},
+  journal = {Journal of Structural Biology},
+  year = {2001},
+  volume = {136},
+  pages = {167-180}
+}
+@techreport{Nordberg1992a,
+  author = {Nordberg, K.},
+  title = {Signal Representation and Signal Processing using Operators},
+  year = {1992},
+  address = {{Link\"oping}, Sweden},
+  institution = {{Link\"oping} University},
+  note = {LiTH-ISY-I-1387}
+}
+@article{Faydi2001,
+  author = {Faydi, E. and Andrieu, J. and Laurent, P.},
+  title = {Experimental Study and Modeling of the Ice Crystal Morphology of Model Standard Ice Cream. Part {I}: Direct Characterization Method and Experimental Data},
+  journal = {Journal of Food Engineering},
+  year = {2001},
+  volume = {48},
+  pages = {283--291}
+}
+@article{Griffin1997,
+  author = {Griffin, L.D.},
+  title = {Scale-Imprecision Space},
+  journal = {Image and Vision Computing},
+  year = {1997},
+  volume = {15},
+  number = {5},
+  pages = {369--398}
+}
+@phdthesis{Cavallo2002,
+  author = {Cavallo, A.},
+  title = {Four Dimensional Particle Tracking in Biological Dynamic Processes},
+  year = {2002},
+  month = {June},
+  address = {Heidelberg, Germany},
+  school = {Ruprechts-Karls-{Universit\"at}}
+}
+@phdthesis{Leeuw1997,
+  author = {Leeuw, W. de},
+  title = {Presentation and Exploration of Flow Data},
+  year = {1997},
+  address = {The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Unser1993a,
+  author = {Unser, Michael and Aldroubi, Akram and Eden, Murray},
+  title = {{B}-Spline Signal Processing: Part {II} - Efficient Design and Applications},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1993},
+  volume = {41},
+  number = {2},
+  pages = {834--848},
+  month = {February}
+}
+@article{Deschamps2001,
+  author = {Deschamps, T. and Cohen, L.D.},
+  title = {Fast extraction of minimal paths in 3D images and applications to virtual endoscopy},
+  journal = {Medical Image Analysis},
+  year = {2001},
+  volume = {5},
+  number = {4},
+  pages = {281-299}
+}
+@article{Torok1998,
+  author = {{T\"or\"ok}, P. and Higdon, P.D. and Wilson, T.},
+  title = {On the general properties of polarised light conventional and confocal microscopes},
+  journal = {Optics Communications},
+  year = {1998},
+  volume = {148},
+  number = {4-6},
+  pages = {300-315}
+}
+@article{Rose2004,
+  author = {Rose, H.},
+  title = {Outline of an ultracorrector compensating for all primary chromatic and geometrical aberrations of charged-particle lenses},
+  journal = {Nuclear Instruments and Methods in Physics Research A},
+  year = {2004},
+  volume = {519},
+  pages = {12-27}
+}
+@article{Jain1979,
+  author = {Jain, A.K.},
+  title = {A Sinusoidal Family of Unitary Transforms},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1979},
+  volume = {1},
+  number = {4},
+  pages = {356--365},
+  month = {October},
+  annote = {key_fft}
+}
+@article{Weickert1999a,
+  author = {Weickert, J. and Ishikawa, S. and Imiya, A.},
+  title = {Linear scale-space has first been proposed in {Japan}},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {1999},
+  volume = {10},
+  number = {3},
+  pages = {237--252}
+}
+@article{Doel1998,
+  author = {Doel, L.R. van den and Vliet, L.J. van},
+  title = {Quantitative evaluation of light microscopes based on image processing techniques},
+  journal = {Bioimaging},
+  year = {1998},
+  volume = {6},
+  number = {3},
+  pages = {138-149}
+}
+@article{Mallat1992,
+  author = {Mallat, S.G. and Zhong, S.},
+  title = {Characterization of Signals from Multiscale Edges},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1992},
+  volume = {14},
+  number = {7},
+  pages = {710--732},
+  month = {June}
+}
+@inproceedings{Bulow1997,
+  author = {{B\"ulow}, T. and Sommer, G.},
+  title = {Algebraically Extended Representations of Multi-Dimensional Signals},
+  year = {1997},
+  volume = {I},
+  pages = {559--566},
+  month = {June 9-11},
+  booktitle = {Proceedings of the 10th Scandinavian Conference on Image Analysis (Lappeenranta, Finland)}
+}
+@article{Bailey1990,
+  author = {Bailey, D.H.},
+  title = {{FFT}s in External or Hierarchical Memory},
+  journal = {The Journal of Supercomputing},
+  year = {1990},
+  volume = {4},
+  pages = {23--35},
+  annote = {key_fft}
+}
+@article{Boddeke1997,
+  author = {Boddeke, F.R. and Vliet, L.J. van and Young, I.T.},
+  title = {Calibration of the automated z-axis of a microscope using focus functions},
+  journal = {Journal of Microscopy},
+  year = {1997},
+  volume = {186},
+  number = {3},
+  pages = {270-274}
+}
+@inproceedings{Bulow1998,
+  author = {{B\"ulow}, T. and Sommer, G.},
+  title = {Quaternionic {G}abor Filters for Local Structure Classification},
+  pages = {808--810},
+  month = {August 17--20},
+  booktitle = {14th International Conference on Pattern Recognition (Brisbane, Australia)}
+}
+@article{Boddeke1994,
+  author = {Boddeke, F.R. and Vliet, L.J. van and Netten, H. and Young, I.T.},
+  title = {Autofocusing in microscopy based on the {OTF} and sampling},
+  journal = {Bioimaging},
+  year = {1994},
+  volume = {2},
+  number = {4},
+  pages = {193-203}
+}
+@inproceedings{Breton1996,
+  author = {Breton, P. and Zucker, S.W.},
+  title = {Shadows and Shading Flow Fields},
+  year = {1996},
+  pages = {782--789},
+  address = {San Francisco, USA},
+  booktitle = {Proc. IEEE Conference on Computer Vision and Pattern Recognition - CVPR'96}
+}
+@article{Nikolaidis1998,
+  author = {Nikolaidis, N. and Pitas, I.},
+  title = {Nonlinear Processing and Analysis of Angular Signals},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1998},
+  volume = {46},
+  number = {12},
+  pages = {3181--3194},
+  month = {December}
+}
+@article{Monga1992,
+  author = {Monga, O. and Ayache,N. and Sander,P.T.},
+  title = {From voxel to intrinsic surface features},
+  journal = {Image and Vision Computing},
+  year = {1992},
+  volume = {10},
+  number = {6},
+  pages = {403--417}
+}
+@article{Monga1995,
+  author = {Monga, O. and Benayoun, S.},
+  title = {Using Partial Derivatives of 3D Images to Extract Typical Surface Features},
+  journal = {Computer Vision and Image Understanding},
+  year = {1995},
+  volume = {61},
+  number = {2},
+  pages = {171--189}
+}
+@article{Efros1997,
+  author = {Efros, A.L. and Rosen, M.},
+  title = {Random Telegraph Signal in the Photoluminescence Intensity of a Single Quantum Dot},
+  journal = {Physical Review Letters},
+  year = {1997},
+  volume = {78},
+  number = {6},
+  pages = {1110-1113}
+}
+@article{Illingworth1988,
+  author = {Illingworth, J. and Kittler, J.},
+  title = {A Survey of the {H}ough Transform},
+  journal = {Computer Vision, Graphics and Image Processing},
+  year = {1988},
+  volume = {44},
+  number = {1},
+  pages = {87--116},
+  annote = {key_radon}
+}
+@inproceedings{Dorst1993,
+  author = {Dorst, L. and Boomgaard, R. van den},
+  title = {An Analytical Theory of Mathematical Morphology},
+  year = {1993},
+  pages = {245--250},
+  editor = {Serra, J. and Salembier, P.},
+  booktitle = {Mathematical Morphology and its Applications to Signal Processing},
+  organization = {Universitat Politecnica de Catalunya (Barcelona, Spain)}
+}
+@article{Zwier2004,
+  author = {Zwier, J.M. and Rooij, G.J. van and Hofstraat, J.W. and Brakenhoff, G.J.},
+  title = {Image calibration in fluorescence microscopy},
+  journal = {Journal of Microscopy},
+  year = {2004},
+  volume = {216},
+  number = {1},
+  pages = {15-24}
+}
+@article{Heun2001,
+  author = {Heun, P. and Laroche, T. and Shimada, K. and Furrer, P. and Gasser, S.M.},
+  title = {Chromoson Dynamics in the Yeast Interphase Nucleus},
+  journal = {Science},
+  year = {2001},
+  volume = {294},
+  number = {5549},
+  pages = {2181-2187},
+  month = {December}
+}
+@inbook{Dorst1995,
+  author = {Dorst, L. and Boomgaard, R. van den},
+  title = {World Scientific},
+  year = {1995},
+  pages = {13--22},
+  editor = {Dori, D. and Bruckstein, A.},
+  chapter = {Orientation-based Representations for Mathematical Morphology}
+}
+@misc{Dorst1999,
+  author = {Dorst, L. and Mann, S. and Bouma, T.},
+  title = {{GABLE}: A Matlab Tutorial for Geometric Algebra},
+  year = {1999},
+  month = {December}
+}
+@article{Dorst1994,
+  author = {Dorst, L. and Boomgaard, R. van den},
+  title = {Morphological Signal Processing and the Slope Transform},
+  journal = {Signal Processing},
+  year = {1994},
+  volume = {38},
+  pages = {79--98}
+}
+@article{Lichte1996a,
+  author = {Lichte, H. and Geiger, D. and Harscher, A. and Heindl, E. and Lehman, M. and Malamidis, D. and Orchowski, A. and Rau, W.-D.},
+  title = {Artefacts in electron holography},
+  journal = {Ultramicroscopy},
+  year = {1996},
+  volume = {64},
+  pages = {67-77}
+}
+@article{Thust1996,
+  author = {Thust, A. and Overwijk, M.H.F. and Coene, W.M.J. and Lentzen, M.},
+  title = {Numerical correction of lens aberrations in phase-retrieval {HRTEM}},
+  journal = {Ultramicroscopy},
+  year = {1996},
+  volume = {64},
+  pages = {249-264}
+}
+@article{Katsevich1997,
+  author = {Katsevich, A.I.},
+  title = {Local Tomography for the Generalized Radon Transform},
+  journal = {SIAM J. Appl. Math.},
+  year = {1997},
+  volume = {57},
+  number = {4},
+  pages = {1128--1162},
+  month = {August},
+  annote = {key_radon}
+}
+@article{Lopez1999,
+  author = {{L\'opez}, A.M. and Lumbreras, F. and Serrat, J. and Villanueva, J.J.},
+  title = {Evaluation of Methods for Ridge and Valley Detection},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1999},
+  volume = {21},
+  number = {4},
+  pages = {327--335},
+  month = {April}
+}
+@article{Beil1994,
+  author = {Beil, W.},
+  title = {Steerable Filters and Invariance Theory},
+  journal = {Pattern Recognition Letters},
+  year = {1994},
+  volume = {15},
+  pages = {453--460}
+}
+@book{Stauffer1985,
+  author = {Stauffer, D. and Aharony, A.},
+  title = {Introduction to Percolation Theory},
+  year = {1985, 1994},
+  publisher = {Taylor \& Francis},
+  edition = {second}
+}
+@inproceedings{Simoncelli1996a,
+  author = {Simoncelli, E.P. and Adelson, E.H.},
+  title = {Noise Removal via Bayesian Wavelet Coring},
+  year = {1996},
+  pages = {379--382},
+  booktitle = {3rd IEEE International Conference on Image Processing (Lausanne, Switzerland)}
+}
+@article{Shafarenko1997,
+  author = {Shafarenko, Leila and Petrou, Maria and Kittler, Josef},
+  title = {Automatic Watershed Segmentation of Randomly Textured Color Images},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1997},
+  volume = {6},
+  number = {11},
+  pages = {1530--1544},
+  month = {November}
+}
+@article{Duhamel1988,
+  author = {Duhamel, P. and Piron, B. and Etcheto, J.M.},
+  title = {On Computing the Inverse DFT},
+  journal = {IEEE Transactions on Acoustics, Speech and Signal Processing},
+  year = {1988},
+  volume = {36},
+  number = {2},
+  pages = {285--286},
+  month = {February},
+  annote = {key_fft}
+}
+@article{Moser2006,
+  author = {Moser, C. and Mayr, T. and Klimant, I.},
+  title = {Filter cubes with built-in ultrabright light-emitting diodes as exchangeable excitation light sources in fluorescence microscopy},
+  journal = {Journal of Microscopy},
+  year = {2006},
+  volume = {222},
+  pages = {135-140}
+}
+@article{Morrone1988,
+  author = {Morrone, M.C. and Burr, D.C.},
+  title = {Feature Detection in Human Vision: a Phase-Dependent Energy Model},
+  journal = {Proc. Roc. Soc. Lond. B},
+  year = {1988},
+  volume = {235},
+  pages = {221--245}
+}
+@article{Giordano2002,
+  author = {Giordano, L. and Jovin, T.M. and Irie, M. and Jare-Erijman, E.A.},
+  title = {Diheteroarylethenes as Thermally Stable Photoswitchable Acceptors in Photochromic Fluorescence Resonance Energy Transfer ({pcFRET})},
+  journal = {Journal of the American Chemical Society},
+  year = {2002},
+  volume = {124},
+  pages = {7481-7489}
+}
+@article{Iddir2005,
+  author = {Iddir, H. and Disko, M.M. and Ogut, S. and Browning, N.D.},
+  title = {Atomic scale characterization of the Pt/TiO$_2$ interface},
+  journal = {Micron},
+  year = {2005},
+  volume = {36},
+  pages = {233-241}
+}
+@article{Bleau1992a,
+  author = {Bleau, A. and Guise, J. de and LeBlanc, A.-R.},
+  title = {A New Set of Fast Algorithms for Mathematical Morphology, {II}. Identification of Topographic Features on Grayscale Images},
+  journal = {CVGIP: Image Understanding},
+  year = {1992},
+  volume = {56},
+  number = {2},
+  pages = {210--229},
+  month = {September}
+}
+@article{Starink1996,
+  author = {Starink, J.P.P. and Jovin, T.M.},
+  title = {Background correction in scanning probe microscope recordings of macromolecules},
+  journal = {Surface Science},
+  year = {1996},
+  volume = {359},
+  pages = {291-305}
+}
+@inproceedings{Barth2000,
+  author = {Barth, E.},
+  title = {The minors of the structure tensor},
+  year = {2000},
+  pages = {221--228},
+  editor = {Sommer, G. and Krger, N. and Perwass, C.},
+  publisher = {Springer},
+  address = {Berlin},
+  booktitle = {Mustererkennung 2000}
+}
+@article{Sander2003,
+  author = {Sander, B. and Golas, M.M. and Stark, H.},
+  title = {Automatic CTF correction for single particles based upon multivariate statistical analysis of individual power spectra},
+  journal = {Journal of Structural Biology},
+  year = {2003},
+  volume = {142},
+  pages = {392-401}
+}
+@misc{Waagepetersen1997,
+  author = {Waagepetersen, R.},
+  title = {Contributions to the Statistical Modeling of Image Data and Spatial Point Processes},
+  year = {1997},
+  howpublished = {www},
+  note = {University of Aarhus}
+}
+@article{Hentschell1983,
+  author = {Hentschell, H.G.E. and Procaccia, I.},
+  title = {The Infinite Number of Generalized Dimensions of Fractals and Strange Attractors},
+  journal = {Physica D},
+  year = {1983},
+  volume = {8},
+  number = {3},
+  pages = {435--444}
+}
+@inproceedings{Croisier1976,
+  author = {Croisier, A. and Esteban, D. and Galand, C.},
+  title = {Perfect Channel Splitting by Use of Interpolation/Decimation/Tree Decomposition Techniques},
+  year = {1976},
+  pages = {443--446},
+  month = {August},
+  address = {Patras, Greece},
+  booktitle = {International Conference on Information Sciences and Systems}
+}
+@article{Barnard1980,
+  author = {Barnard, S.T. and Thompson, W.B.},
+  title = {Disparity Analysis of Images},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1980},
+  volume = {2},
+  number = {4},
+  pages = {527--534},
+  month = {July}
+}
+@article{Desolneux2001,
+  author = {Desolneux, A. and Moisan, L. and Morel, J.-M.},
+  title = {Edge Detection by {Helmholtz} Principle},
+  journal = {Journal of Mathematical Imaging and Vision},
+  year = {2001},
+  volume = {14},
+  pages = {271--284}
+}
+@phdthesis{Picka1996,
+  author = {Picka, J.D.},
+  title = {Variance-Reducing Modifications for Estimators of Dependence in Random Sets},
+  year = {1996},
+  month = {December},
+  address = {Chicago, USA},
+  school = {University of Chicago}
+}
+@inproceedings{Dijk2003,
+  author = {Dijk, J. and Ginkel, M. van and Asselt, R.J. van and Vliet, L.J. van and Verbeek, P.W.},
+  title = {A new sharpness measure based on Gaussian lines and edges},
+  year = {2003},
+  volume = {2756},
+  pages = {149-156},
+  month = {Aug 25-27},
+  editor = {Petkov, N. and Westenberg, M.A.},
+  publisher = {Springer},
+  series = {Lecture Notes in Computer Science},
+  address = {Berlin},
+  booktitle = {CAIP'03, 10th International Conference on Computer Analysis of Images and Patterns (Groningen, The Netherlands)}
+}
+@inproceedings{Dijk2002,
+  author = {Dijk, J. and Ginkel, M. van and Asselt, R.J. van and Vliet, L.J. van and Verbeek, P.W.},
+  title = {A new sharpness measure based on Gaussian lines and edges},
+  year = {2002},
+  pages = {39--44},
+  month = {June 19-21},
+  editor = {Deprettere, E.F. and Belloum, A. and Heijnsdijk, J.W.J. and Stappen, F. van der},
+  publisher = {ASCI},
+  address = {Delft},
+  booktitle = {Proc. ASCI 2002, 8th Annual Conf. of the Advanced School for Computing and Imaging}
+}
+@article{Bruijne2003,
+  author = {Bruijne, M. de and Niessen, W.J. and Maintz, J.B.A. and Viergever, M.A.},
+  title = {Localization and segmentation of aortic endografts using marker detection},
+  journal = {IEEE Transactions on Medical Imaging},
+  year = {2003},
+  volume = {22},
+  pages = {473-482}
+}
+@article{Rader1968,
+  author = {Rader, C.M.},
+  title = {Discrete {Fourier} Transforms When the Number of Data Samples is Prime},
+  journal = {Proceedings of the IEEE},
+  year = {1968},
+  volume = {56},
+  number = {6},
+  pages = {1107--1108},
+  month = {June},
+  annote = {key_fft}
+}
+@phdthesis{Robbins1996,
+  author = {Robbins, B.J.},
+  title = {The Detection of {2D} Image Features using Local Energy},
+  year = {1996},
+  month = {August},
+  address = {Australia},
+  school = {University of Western Australia}
+}
+@article{Ando2004,
+  author = {Ando, R. and Muzuno, H. and Miyawaki, A.},
+  title = {Regulated fast nucleocytoplasmic shuttling observed by reversible protein highlighting},
+  journal = {Science},
+  year = {2004},
+  volume = {306},
+  pages = {1370-1373}
+}
+@article{Robbins1997,
+  author = {Robbins, B. and Owens, R.},
+  title = {{2D} Feature Detection via Local Energy},
+  journal = {Image and Vision Computing},
+  year = {1997},
+  volume = {15},
+  number = {5},
+  pages = {353--368}
+}
+@article{Stokke1990,
+  author = {Stokke, B.T. and Brant, D.A.},
+  title = {The reliability of wormlike polysaccharides chain dimensions estimated from electron micrographs},
+  journal = {Biopolymers},
+  year = {1990},
+  volume = {30},
+  number = {13},
+  pages = {1161-1181}
+}
+@article{Ando2000,
+  author = {Ando, S.},
+  title = {Consistent Gradient Operators},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2000},
+  volume = {22},
+  number = {3},
+  pages = {252--265},
+  month = {March}
+}
+@techreport{Cullip1990,
+  author = {Cullip, T.J. and Fredericksen, R.E. and Gauch, J.M. and Pizer, S.M.},
+  title = {Algorithms for 2D and 3D Image Description Based on the IAS},
+  year = {1990},
+  institution = {University of North Carolina, U.S.A.},
+  note = {TR90-034}
+}
+@article{Dempster1977,
+  author = {Demster, A.P. and Laird, N.M. and Rubin, D.B.},
+  title = {Maximum Likelihood from Incomplete Data via the {EM} algorithm},
+  journal = {Journal of the Royal Statistical Society B},
+  year = {1977},
+  volume = {39},
+  pages = {1--37}
+}
+@article{Marshall1997,
+  author = {Marshall, W.F. and Straight, A. and Marko, J.F. and Swedlow, J. and Dernburg, A. and Murray, A.W. and Agard, D.A. and Sedat, J.W.},
+  title = {Interphase chromosomes undergo constrained diffusional motion in living cells},
+  journal = {Current Biology},
+  year = {1998},
+  volume = {7},
+  number = {12},
+  pages = {930-939}
+}
+@inproceedings{Borga1997,
+  author = {Borga, M. and Knutsson, H. and Landelius, T.},
+  title = {Learning Canonical Correlations},
+  year = {1997},
+  volume = {I},
+  pages = {1--8},
+  month = {June 9-11},
+  booktitle = {Proceedings of the 10th Scandinavian Conference on Image Analysis (Lappeenranta, Finland)}
+}
+@article{Perona1998,
+  author = {Perona, P.},
+  title = {Orientation Diffusions},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1998},
+  volume = {7},
+  number = {3},
+  pages = {457--467},
+  month = {March}
+}
+@phdthesis{Borga1998,
+  author = {Borga, M.},
+  title = {Learning Multidimensional Signal Processing},
+  year = {1998},
+  address = {{Link\"oping, Sweden}},
+  school = {{Link\"oping University}}
+}
+@article{Perona1990,
+  author = {Perona, P. and Malik, J.},
+  title = {Scale-Space and Edge Detection Using Anisotropic Diffusion},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1990},
+  volume = {12},
+  number = {7},
+  pages = {629--639},
+  month = {July}
+}
+@inproceedings{Wink2001,
+  author = {Wink, O. and Niessen, W.J. and Verdonck, B. and Viergever, M.A.},
+  title = {Vessel Axis Determination Using Wave Front Propagation Analysis},
+  year = {2001},
+  pages = {845-853},
+  editor = {Niessen, W. and Viergever, M.A.},
+  booktitle = {MICCAI'01}
+}
+@article{Perona1995,
+  author = {Perona, P.},
+  title = {Deformable Models for Early Vision},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1995},
+  volume = {17},
+  number = {5},
+  pages = {488--499},
+  month = {May}
+}
+@book{Gauss1801,
+  author = {Gauss, C.F.},
+  title = {Disquisitiones Arithmeticae},
+  year = {1801},
+  publisher = {{K\"oniglichen Gesellschaft der Wissenschaft}},
+  address = {{G\"ottingen} }
+}
+@article{Dirks2003,
+  author = {Dirks, R.W. and Molenaar, C. and Tanke, H.J.},
+  title = {Visualizing {RNA} molecules inside the nucleus of living cells},
+  journal = {Methods},
+  year = {2003},
+  volume = {29},
+  number = {1},
+  pages = {51-57}
+}
+@article{Dirks2001,
+  author = {Dirks, R.W. and Molenaar, R.W. and Tanke, H.J.},
+  title = {Methods for visualizing RNA processing and transport pathways in living cells},
+  journal = {Histochemistry and Cell Biology},
+  year = {2001},
+  volume = {115},
+  number = {1},
+  pages = {3-11}
+}
+@article{Bangham1994,
+  author = {Bangham, J.A. and Campbell, T.G. and Aldridge, R.V.},
+  title = {Multiscale Median and Morphological Filters for 2D Pattern Recognition},
+  journal = {Signal Processing},
+  year = {1994},
+  volume = {38},
+  number = {3},
+  pages = {387--415}
+}
+@book{HandbookCP1992,
+  title = {Handbook of Chemistry and Physics },
+  year = {1992},
+  editor = {Lide, D.R. },
+  publisher = {CRC Press },
+  edition = {82th}
+}
+@article{Bangham1996,
+  author = {Bangham, J.A. and Chardaire, P. and Pye, C.J. and Ling, P.D.},
+  title = {Multiscale Nonlinear Decomposition: The Sieve Decomposition Theorem},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1996},
+  volume = {18},
+  number = {5},
+  pages = {529--539},
+  month = {May}
+}
+@article{Clerc2002,
+  author = {Clerc, M. and Mallat, S.},
+  title = {The Texture Gradient Equation for Recovering Shape from Texture},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2002},
+  volume = {24},
+  number = {4},
+  pages = {536--549},
+  month = {April}
+}
+@article{Dijkstra1959,
+  author = {Dijkstra, E.W.},
+  title = {A note on two problems in connexion with graphs.},
+  journal = {Numerische Mathematik },
+  year = {1959},
+  volume = {1},
+  pages = {269--271}
+}
+@article{Andrey1998,
+  author = {Andrey, P. and Tarroux, P.},
+  title = {Unsupervised Segmentation of {M}arkov Random Field Modeled Textured Images Using Selectionist Relaxation},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {3},
+  pages = {252--262},
+  month = {March}
+}
+@article{Hestenes1994,
+  author = {Hestenes, D.},
+  title = {Invariant Body Kinematics: {I}. Saccadic and Compensatory Eye Movements},
+  journal = {Neural Networks},
+  year = {1994},
+  volume = {7},
+  number = {1},
+  pages = {65--77}
+}
+@article{Osher1988,
+  author = {Osher, S. and Sethian, J.A.},
+  title = {Fronts Propagating with Curvature-Dependent Speed: Algorithms Based on {H}amilton-{J}acobi Formulations},
+  journal = {Journal of Computational Physics},
+  year = {1988},
+  volume = {79},
+  pages = {12--49}
+}
+@article{Ram2006,
+  author = {Ram, S. and Ward, E.S. and Ober, R.J.},
+  title = {Beyond Rayleighs criterion: {A} resolution measure with application to single-molecule microscopy},
+  journal = {Proceedings of the National Academy of Sciences USA},
+  year = {2006},
+  volume = {103},
+  number = {12},
+  pages = {4457-4462}
+}
+@article{Schwertner2004a,
+  author = {Schwertner, M. and Booth, M.J. and Neil, M.A.A. and Wilson, T.},
+  title = {Measurement of specimen induced aberrations of biological samples using phase stepping interferometry},
+  journal = {Journal of Microscopy},
+  year = {2004},
+  volume = {213},
+  number = {1},
+  pages = {11-19}
+}
+@article{Schwertner2004b,
+  author = {Schwertner, M. and Booth, M.J. and Wilson, T.},
+  title = {Simulation of specimen-induced aberrations for objects with spherical and cylindrical symmetry},
+  journal = {Journal of Microscopy},
+  year = {2004},
+  volume = {215},
+  number = {3},
+  pages = {271-280}
+}
+@article{Simoncelli1992,
+  author = {Simoncelli, E.P. and Freeman, W.T. and Adelson, E.H. and Heeger, D.J.},
+  title = {Shiftable Multi-scale Transforms},
+  journal = {IEEE Transactions on Information Theory},
+  year = {1992},
+  volume = {38},
+  number = {2},
+  pages = {587--607},
+  month = {March}
+}
+@article{Simoncelli1996,
+  author = {Simoncelli, E.P. and Farid, H.},
+  title = {Steerable wedge filters for local orientation analysis},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1996},
+  volume = {5},
+  number = {9},
+  pages = {1377--1382}
+}
+@article{Viero1995,
+  author = {Viero, T. and Jeulin, D.},
+  title = {Morphological Extraction of Line Networks from Noisy Low-Contrast Images},
+  journal = {Journal of Visual Communication and Image Representation},
+  year = {1995},
+  volume = {6},
+  number = {4},
+  pages = {335--347},
+  month = {December}
+}
+@article{Simoncelli1990,
+  author = {Simoncelli, E.P. and Adelson, E.H.},
+  title = {Non-Separable Extensions of Quadrature Mirror Filters to Multiple Dimensions},
+  journal = {Proceedings of the IEEE},
+  year = {1990},
+  volume = {78},
+  number = {4},
+  pages = {652--664},
+  month = {April}
+}
+@inproceedings{Luengo2001b,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {A Rotation-Invariant Morphology for Shape Analysis of Anisotropic Objects and Structures},
+  year = {2001},
+  volume = {2059},
+  pages = {378--387},
+  editor = {Arcelli, C. and Cordella, L.P. and Sanniti, G. di Baja},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  address = {Capri, Italy},
+  booktitle = {Proc. 4th International Workshop on Visual Form}
+}
+@inproceedings{Luengo2001a,
+  author = {Luengo Hendriks, C.L. and Vliet, L.J. van},
+  title = {Segmentation-Free Estimation of Length Distributions Using Sieves and RIA Morphology},
+  year = {2001},
+  pages = {129--136},
+  publisher = {ASCI, Delft},
+  address = {Heijen, the Netherlands},
+  booktitle = {Proc. 7th Annual Conference of the Advanced School for Computing and Imaging}
+}
+@article{Khotanzad1990,
+  author = {Khotanzad, A. and Hong, Y.H.},
+  title = {Invariant Image Recognition by {Z}ernike Moments},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1990},
+  volume = {12},
+  number = {5},
+  pages = {489--497},
+  month = {May}
+}
+@article{Lindenbaum1993,
+  author = {Lindenbaum, M. and Fischer, M. and Bruckstein, A.},
+  title = {On {G}abor's contribution to image enhancement},
+  journal = {Pattern Recognition},
+  year = {1993},
+  volume = {27},
+  number = {1},
+  pages = {1--8}
+}
+@article{Rose2002,
+  author = {Rose, H.},
+  title = {Theory of electron-optical achromats and apochromats},
+  journal = {Ultramicroscopy},
+  year = {2002},
+  volume = {93},
+  pages = {293-303}
+}
+@inproceedings{Hertzmann2001,
+  author = {Hertzmann, A. and Jacobs, C.E. and Oliver, N. and Curless, B. and Salesin, D.H.},
+  title = {Image Analogies},
+  year = {2001},
+  pages = {327--340},
+  publisher = {ACM Press},
+  booktitle = {{SIGGRAPH}, Computer Graphics Proceedings}
+}
+@article{Rose2005,
+  author = {Rose, H.},
+  title = {Prospects for aberration-free electron microscopy},
+  journal = {Ultramicroscopy},
+  year = {2005},
+  volume = {103},
+  pages = {1-6}
+}
+@article{Rioul1991,
+  author = {Rioul, O. and Vetterli, M.},
+  title = {Wavelets and Signal Processing},
+  journal = {IEEE Signal Processing Magazine},
+  year = {1991},
+  pages = {14--38},
+  month = {October}
+}
+@article{Torok1995,
+  author = {{T\"or\"ok}, P. and Varga, P. and Laczik, Z. and Booker, G.R. },
+  title = {Electromagnetic diffraction of light focused through a planar interface between materials of mismatched refractive indices: an integral representation},
+  journal = {Journal of the Optical Society of America A},
+  year = {1995},
+  volume = {12},
+  number = {2},
+  pages = {325-332}
+}
+@article{Acton2001,
+  author = {Acton, S.T.},
+  title = {Fast Algorithms for Area Morphology},
+  journal = {Digital Signal Processing},
+  year = {2001},
+  volume = {11},
+  pages = {187--203}
+}
+@article{Acton2000,
+  author = {Acton, Scott T. and Mukherjee, Dipti Prasad},
+  title = {Scale Space Classification Using Area Morphology},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2000},
+  volume = {9},
+  number = {4},
+  pages = {623--635},
+  month = {April}
+}
+@article{Vonck2000,
+  author = {Vonck, J.},
+  title = {Parameters a?ecting specimen flatness of two-dimensional crystals for electron crystallography},
+  journal = {Ultramicroscopy},
+  year = {2000},
+  volume = {85},
+  pages = {123-129}
+}
+@book{Bishop1998,
+  author = {Bishop, C.M.},
+  title = {Neural Networks for Pattern Recognition},
+  year = {1998},
+  publisher = {Oxford University Press},
+  address = {New York}
+}
+@book{Bishop1995,
+  author = {Bishop, C.M.},
+  title = {Neural Networks for Pattern Recognition},
+  year = {1995},
+  publisher = {Oxford University Press}
+}
+@misc{Hough1962,
+  author = {Hough, P.V.C.},
+  title = {Method and Means for Recognizing Complex Patterns},
+  year = {1962},
+  howpublished = {US misc nr. 3069654}
+}
+@article{Clayton2004,
+  author = {Clayton, A.H.A. and Hanley, Q.S. and Verveer, P.J.},
+  title = {Graphical representation and multicomponent analysis of single-frequency fluorescence lifetime imaging microscopy data},
+  journal = {Journal of Microscopy},
+  year = {2004},
+  volume = {213},
+  pages = {1-5}
+}
+@article{Maintz1996kort,
+  author = {Maintz, J.B.A. and Elsen, P.A. van den and Viergever, M.A. },
+  title = {Evaluation of ridge seeking operators for multimodality medical image matching },
+  journal = {PAMI},
+  year = {1996},
+  volume = {18},
+  number = {4},
+  pages = {353--365}
+}
+@phdthesis{SMALLSMALLGinkel2002,
+  author = {Ginkel, M. van},
+  title = {Image Analysis using Orientation Space based on Steerable Filters},
+  year = {2002},
+  address = {Delft, The Netherlands},
+  school = {Delft University of Technology}
+}
+@misc{Stereology2000,
+  title = {Summer School on Stereology and Geometric Tomography},
+  year = {2000},
+  month = {20-25 May},
+  howpublished = {www},
+  note = {Sandberg Manor, Denmark}
+}
+@article{Clayton2002,
+  author = {Clayton, A.H.A. and Hanley, Q.S. and Arndt-Jovin, D.J. and Subramaniam, V. and Jovin, T.M.},
+  title = {Dynamic Fluorescence Anisotropy Imaging Microscopy in the Frequency Domain {(rFLIM)}},
+  journal = {Biophysical Journal},
+  year = {2002},
+  volume = {83},
+  number = {3},
+  pages = {1631-1649}
+}
+@article{Desolneux2002,
+  author = {Desolneux, A. and Ladjal, S. and Moisan, L. and Morel, J.-M.},
+  title = {Dequantizing image orientation},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2002},
+  volume = {11},
+  number = {10},
+  pages = {1129--1140}
+}
+@inproceedings{Bigun1987,
+  author = {{Big\"un}, J. and Granlund, G.H.},
+  title = {Optimal orientation detection of linear symmetry},
+  year = {1987},
+  pages = {433-438},
+  month = {June 8-11},
+  publisher = {IEEE Computer Society Press},
+  address = {London},
+  booktitle = {Proceedings of the first IEEE International Conference on Computer Vision}
+}
+@techreport{Bigun1986,
+  author = {{Big\"un}, J.},
+  title = {Circular Symmetry Models in Image Processing.},
+  number = {LIU-TEK-LIC-1986:25},
+  address = {{Link\"oping University}, Sweden},
+  institution = {Computer Vision Laboratory},
+  type = {Lic. Thesis},
+  note = {Thesis No. 85}
+}
+@article{Bowie1977a,
+  author = {Bowie, J.E. and Young, I.T.},
+  title = {An Analysis Technique for Biological Shape -- {III}},
+  journal = {Acta Cytologica},
+  year = {1977},
+  volume = {21},
+  number = {6},
+  pages = {739--746}
+}
+@article{Glossop1999,
+  author = {Glossop, K. and Lisboa, P.J.G. and Russell, P.C. and Siddans, A. and Jones, G.R.},
+  title = {An implementation of the Hough Transformation for the Identification and Labeling of Fixed Period Sinusoidal Curves},
+  journal = {Computer Vision and Image Understanding},
+  year = {1999},
+  volume = {74},
+  number = {1},
+  pages = {96--100},
+  month = {April},
+  annote = {key_radon}
+}
+@article{Crowley1984,
+  author = {Crowley, J.L. and Parker, A.C.},
+  title = {A Representation for Shape Based on Peaks and Ridges in the Difference of Low-Pass Transform},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1984},
+  volume = {6},
+  number = {2},
+  pages = {156--170},
+  month = {March}
+}
+@inproceedings{Kraaijveld2000,
+  author = {Kraaijveld, M.A. and Epping, W.J.M.},
+  title = {Harnessing Advanced Image Analysis Technology for Quantitative Core and Borehole Image Interpretation},
+  year = {2000},
+  pages = {paper VV},
+  month = {June 4-7},
+  booktitle = {proceedings of the 41st SPWLA annual symposium, Dallas}
+}
+@article{Joanicot1987,
+  author = {Joanicot, M. and Revet, B.},
+  title = {{DNA} conformational studies from electron microscopy. {I. Excluded} volume effect and structure dimensionality},
+  journal = {Biopolymers},
+  year = {1987},
+  volume = {26},
+  number = {2},
+  pages = {315-326}
+}
+@article{Brown2003,
+  author = {Brown, M.Z. and Burschka, D. and Hager, G.D.},
+  title = {Advances in Computational Stereo},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2003},
+  volume = {25},
+  number = {8},
+  pages = {993--1007},
+  month = {August}
+}
+@article{Typke2004,
+  author = {Typke, D. and Duwning, K.H. and Glaeser, R.M.},
+  title = {Electron Microscopy of Biological Macromolecules: Bridging the GAp between What Physics Allows and What We Currently Can Get},
+  journal = {Microscopy and Microanalysis},
+  year = {2004},
+  volume = {10},
+  pages = {21-27}
+}
+@book{Simmonds1982,
+  author = {Simmonds, J.G.},
+  title = {A Brief on Tensor Analysis},
+  year = {1982},
+  publisher = {Springer-Verlag}
+}
+@article{Li2004,
+  author = {Li, W. and Leung, W.},
+  title = {A maximum likelihood approach for image registration using control point and intensity},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2004},
+  volume = {13},
+  number = {8},
+  pages = {1115-1127}
+}
+@book{Cressie1993,
+  author = {Cressie, N.A.C.},
+  title = {Statistics for Spatial Data},
+  year = {1993},
+  publisher = {John Wiley \& Sons, inc},
+  edition = {Revised}
+}
+@article{McLaughlin1998,
+  author = {McLaughlin, R.A. and Alder, M.D.},
+  title = {The Hough Transform Versus the Upwrite},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1998},
+  volume = {20},
+  number = {4},
+  pages = {396--400},
+  month = {April},
+  annote = {key_radon}
+}
+@inproceedings{Rieger2003b,
+  author = {Rieger, B. and Vliet, L.J. van},
+  title = {Representing Orientation in n-Dimensional Spaces},
+  year = {2003},
+  pages = {17-24},
+  month = {August 25-27 },
+  editor = {Petkov, N. and Westenberg, M.A.},
+  publisher = {Springer Verlag},
+  series = {LNCS 2756},
+  address = {Berlin},
+  booktitle = {CAIP'03, 10th International Conference on Computer Analysis of Images and Patterns (Groningen, The Netherlands) }
+}
+@article{Rieger2003c,
+  author = {Rieger, B. and Doel, L.R. van den and Vliet, L.J. van },
+  title = {Ring Formation in Nanoliter Cups: Quantitative Measurements of Flow in Micromachined Wells},
+  journal = {Physical Review E},
+  year = {2003},
+  volume = {68},
+  number = {3},
+  pages = {036312}
+}
+@inproceedings{Rieger2003a,
+  author = {Rieger, B. and Molenaar, C. and Dirks, R.W. and Vliet, L.J. van},
+  title = {Affine correction without correspondence applied to 4D cellular motion in confocal microscopy},
+  year = {2003},
+  month = {June 4-6},
+  editor = {Vassiliadis, S. and Florak, L.M.J. and Heijnsdijk, J.W.J and Steen, A. van den},
+  booktitle = {ASCI'03, Proceedings of the 9th Annual Conference of the Advanced School for Computing and Imaging (Lommel, Belgium) }
+}
+@article{Grayson1987,
+  author = {Grayson, M.},
+  title = {The heat equation shrinks embedded plane curves to round points},
+  journal = {Journal of Differential Geometry},
+  year = {1987},
+  volume = {26},
+  pages = {285--314}
+}
+@article{Danielsson1990,
+  author = {Danielsson, P.-E. and Seger, O.},
+  title = {Rotation Invariance in Gradient and Higher Order Derivative Detectors},
+  journal = {Computer Vision, Graphics, and Image Processing},
+  year = {1990},
+  volume = {49},
+  number = {2},
+  pages = {198--221}
+}
+@article{Hanley2001,
+  author = {Hanley, Q.S. and Subramaniam, V. and Arndt-Jovin, D.J. and Jovin, T.M.},
+  title = {Fluorescence Lifetime Imaging: Multi-point Calibration, Minimum Resolvable Differences, and Artifact Suppression},
+  journal = {Cytometry},
+  year = {2001},
+  volume = {43},
+  pages = {248-260}
+}
+@article{Hanley2002,
+  author = {Hanley, Q.S. and Ardent-Jovin, D.J. and Jovin, T.M.},
+  title = {Spectrally resolved fluorescence lifetime imaging microscopy},
+  journal = {Applied Spectroscopy},
+  year = {2002},
+  number = {56},
+  pages = {155-166}
+}
+@article{Saffman1975,
+  author = {Saffman, P.G. and {Delbr\"uck}, M.},
+  title = {Brownian motion in biolocial membranes},
+  journal = {Proc. Nat. Acad. Sci. USA},
+  year = {1975},
+  volume = {72},
+  number = {8},
+  pages = {3111-3113}
+}
+@article{Casadio1999,
+  author = {Casadio Tarabusi, E. and Cohen, J.M. and Colonna, F.},
+  title = {Characterization of the Range of the {Radon} Transform on Homogeneous Trees},
+  journal = {Electronic Research Announcements of the American Mathematical Society},
+  year = {1999},
+  volume = {5},
+  pages = {11--17},
+  month = {February}
+}
+@article{Goldberg1991a,
+  author = {Goldberg, D.},
+  title = {What Every Computer Scientist Should Know about Floating-Point Arithmetic},
+  journal = {ACM Computing Surveys},
+  year = {1991},
+  volume = {23},
+  number = {1},
+  pages = {5--48},
+  note = {A reprint. Extended?}
+}
+@article{Willert1991,
+  author = {Willert, C.E. and Gharib, M.},
+  title = {Digital particle image velocimetry},
+  journal = {Experiments in Fluids},
+  year = {1991},
+  volume = {10},
+  pages = {181-193}
+}
+@article{Soille2001,
+  author = {Soille, Pierre and Talbot, Hugues},
+  title = {Directional Morphological Filtering},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2001},
+  volume = {23},
+  number = {11},
+  pages = {1313--1329},
+  month = {November}
+}
+@article{Soille2002,
+  author = {Soille, P.},
+  title = {Short Survey on Morphological Operators Based on Rank Filters},
+  journal = {Pattern Recognition},
+  year = {2002},
+  volume = {35},
+  pages = {527-535}
+}
+@book{Landau1999,
+  author = {Landau, L.D. and Lifshitz, E.M.},
+  title = {Statistical Physics, Part 1},
+  year = {1999},
+  publisher = {Butterworth-Heinemann},
+  edition = {third}
+}
+@article{Rintoul1997,
+  author = {Rintoul, M.D. and Torquato, S.},
+  title = {Precise determination of the critical threshold and exponents in a three-dimensional continuum percolation model},
+  journal = {J. Phys. A: Math Gen},
+  year = {1997},
+  volume = {30},
+  pages = {585--592}
+}
+@article{Belongie2002,
+  author = {Belongie, S. and Malik, J. and Puzicha, J.},
+  title = {Shape Matching and Object Recognition Using Shape Contexts},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {2002},
+  volume = {24},
+  number = {4},
+  pages = {509--522},
+  month = {April}
+}
+@phdthesis{Reinders2001,
+  author = {Reinders, F.},
+  title = {Feature-Based Visualization of Time-Dependent Data},
+  year = {2001},
+  address = {The Netherlands},
+  school = {Delft University of Technology}
+}
+@article{Deans1981,
+  author = {Deans, S.R.},
+  title = {{H}ough Transform from the {R}adon Transform},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1981},
+  volume = {3},
+  number = {2},
+  pages = {185--188},
+  month = {March},
+  annote = {key_radon}
+}
+@article{Meijering2003,
+  author = {Meijering, E. and Unser, M.},
+  title = {A Note on Cubic Convolution Interpolation},
+  journal = {IEEE Transactions on Image Processing},
+  year = {2003},
+  volume = {12},
+  number = {4},
+  pages = {477--479},
+  month = {April}
+}
+@article{Meijering2002,
+  author = {Meijering, E.},
+  title = {A Chronology of Interpolation: From Ancient Astronomy to Modern Signal and Image Processing},
+  journal = {Proceedings of the IEEE},
+  year = {2002},
+  volume = {90},
+  number = {3},
+  pages = {319--342},
+  month = {March}
+}
+@incollection{Jovin1989,
+  author = {Jovin, T.M. and Arndt-Jovin, D.J.},
+  title = {{FRET} Microscopy: Digital Imaging of Fluorescence Resonance Energy Transfer. Application in Cell Biology},
+  year = {1989},
+  pages = {99-117},
+  editor = {Kohen, E.},
+  publisher = {Academic Press},
+  address = {New York},
+  booktitle = {Cell Structure and Function by Microspectrofluorometry}
+}
+@article{Egner2004,
+  author = {Egner, A. and Verrier, S. and Goroshkov, A. and S?ing, H-D. and Hell, S.W.},
+  title = {{4Pi}-microscopy of the {Golgi} apparatus in live mammalian cells},
+  journal = {Journal of Structural Biology},
+  year = {2004},
+  volume = {147},
+  number = {1},
+  pages = {70-76}
+}
+@article{Dorst1987,
+  author = {Dorst, L. and Smeulders, A.W.M.},
+  title = {Length Estimators for Digitized Contours},
+  journal = {Computer Vision, Graphics and Image Processing},
+  year = {1987},
+  volume = {40},
+  pages = {311--333}
+}
+@article{Dorst1986,
+  author = {Dorst, L. and Smeulders, A.W.M.},
+  title = {Best Linear Unbiased Estimators for Properties of Digitized Straight Lines},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1986},
+  volume = {8},
+  number = {2},
+  pages = {276--282},
+  month = {March}
+}
+@incollection{Olver1994,
+  author = {Olver, P. and Sapiro, G. and Tannenbaum, A.},
+  title = {Differential invariant signatures and flows in computer vision: a symmetry group approach},
+  year = {1994},
+  pages = {255--306},
+  editor = {Ter Haar Romeny B.M.},
+  publisher = {Kluwer Academic Publishers},
+  chapter = {11},
+  booktitle = {Geometry-driven diffusion in computer vision}
+}
+@techreport{Dorst1980,
+  author = {Dorst, L.},
+  title = {A Coordinate System for the Crystal Ball},
+  year = {1980},
+  institution = {CERN}
+}
+@article{Hoyer2002,
+  author = {Hoyer, W. and Antony, T. and Cherny, D.I. and Heim, G. and Jovin, T.M. and Subramaniam, V.},
+  title = {Dependence of $\alpha$-synuclein aggregate morphology on solution conditions},
+  journal = {Journal of Molecular Biology},
+  year = {2002},
+  volume = {322},
+  number = {2},
+  pages = {383-393}
+}
+@inproceedings{Ginneken1999,
+  author = {Ginneken, B. van and Haar Romeny, B. M. ter},
+  title = {Applications of Locally Orderless Images},
+  volume = {1682},
+  pages = {10--21},
+  editor = {Nielsen, Mads and Johansen, Peter and Olsen, Ole F. and Weickert, Joachim},
+  publisher = {Springer-Verlag},
+  series = {Lecture Notes on Computer Science},
+  booktitle = {Scale-Space Theories in Computer Vision (Second International Conference, Scale-Space'99, Corfu, Greece)}
+}
+@article{Mitiche1988,
+  author = {Mitiche, A. and Grisell, R. and Aggarwal, J.K.},
+  title = {On smoothness of a vector field-application to optical flow},
+  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
+  year = {1988},
+  volume = {10},
+  number = {6},
+  pages = {943--949}
+}
+@article{Cognet1999,
+  author = {Cognet, J.A.H. and Pakleza, C. and Cherny, D.I. and Delain, E. and Cam, E. le},
+  title = {Static curvature and flexibility measurements of {DNA} with microscopy. {A} simple renormalization method, its assessment by experiment and simulation},
+  journal = {Journal of Molecular Biology},
+  year = {1999},
+  volume = {285},
+  number = {3},
+  pages = {997-1009}
+}
+@article{Segall2006,
+  author = {Segall, D.E. and Nelson, P.C. and Phillips, R.},
+  title = {Volume-Exclusion Effects in Tethered-Particle Experiments: Bead Size Matters},
+  journal = {Physical Review Letters},
+  year = {2006},
+  volume = {96},
+  pages = {088306}
+}
+@article{Krieger1996,
+  author = {Krieger, G. and Zetzsche, C.},
+  title = {Nonlinear Image Operators for the Evaluation of Local Intrinsic Dimensionality},
+  journal = {IEEE Transactions on Image Processing},
+  year = {1996},
+  volume = {5},
+  number = {6},
+  pages = {1026--1042},
+  month = {June}
+}
+@book{Rudin1991,
+  author = {Rudin, W.},
+  title = {Functional Analysis},
+  year = {1991, 1973},
+  publisher = {McGraw-Hill},
+  edition = {second}
+}
+@article{Mattfeldt2000a,
+  author = {Mattfeldt, T. and Stoyan, D.},
+  title = {Improved Estimation of the Pair Correlation Function of Random Sets},
+  journal = {Journal of Microscopy},
+  year = {2000},
+  volume = {200, Pt 2},
+  pages = {158--173},
+  month = {November}
+}
+@article{Toprak2007,
+  author = {Toprak, E. and Balci, H. and Blehm, B.H. and  Selvin, P.R.},
+  title = {Three-Dimensional Particle Tracking via Bifocal Imaging},
+  journal = {Nano Letter},
+  year = {2007},
+  volume = {7},
+  number = {7},
+  pages = {2043-2045}
+}
+@article{Xu2010,
+  author = {Xu, Q. and Dyck, D. van and Zandbergen, H.W.},
+  title = {From thickness dependent exit waves to projected potential: Thickness derivative approach},
+  journal = {Ultramicroscopy},
+  year = {2010},
+  volume = {110},
+  pages = {535-542}
+}
+@article{Zewail2010,
+  author = {Zewail, A. H. and },
+  title = {Four-Dimensional Electron Microscopy},
+  journal = {Science},
+  year = {2010},
+  volume = {328},
+  pages = {187-193}
+}
+@article{Pertsinidis2010,
+  author = {Pertsinidis, A. and Zhang, Y. and Chu, S.},
+  title = {Subnanometre single-molecule localization, registration and distance measurements},
+  journal = {Nature},
+  year = {2010}
+}
+@article{Okamoto2010,
+  author = {Okamoto, H.},
+  title = {Subnanometre single-molecule localization,
+registration and distance measurements},
+  journal = {Physical Review A},
+  year = {2010},
+  volume = {38},
+  pages = {043807}
+}
+@article{Muller2010,
+  author = {{M\"uller}, C.B. and Enderlein, J.},
+  title = {Image Scanning Microscopy},
+  journal = {Physical Review Letters},
+  year = {2010},
+  volume = {104},
+  pages = {198101}
+}
+@article{Jonge2010,
+  author = {Jonge, N. de and Poirier-Demes, N. and Dermes, H. and Peckys, D.B. and Drouin, D.},
+  title = {Nanometer-resolution electron microscopy through micrometers-thick water layers},
+  journal = {Ultramicroscopy},
+  year = {2010},
+  volume = {110},
+  pages = {1114-1119}
+}
+@article{Kouskousis2010,
+  author = {Koukousis, B.P. and Embden J. van and Morrish, D. and Russell, S.M. and Gu, M.},
+  title = {Super-resolution imaging and statistical analysis
+of CdSe/CdS Core/Shell semiconductor nanocrystals},
+  journal = {Journal of Biophotonics},
+  year = {2010},
+  volume = {3},
+  number = {7},
+  pages = {437-445}
+}
+@article{Stark2001,
+  author = {Stark, H. and Dube, P. and {L\"uhrmann}, R. and Kastner, B.},
+  title = {Arrangement of RNA and proteins in the spliceosomal U1 small nuclear ribonucleoprotein particle},
+  journal = {Nature},
+  year = {2001},
+  volume = {409},
+  pages = {539-541}
+}
+@article{Milazzo2010,
+  author = {Milazzo, A-C. and Moldovan, G. and Lanman, J. and Jin, L. and Bouwer, J.C. and Klienfelder, S. and Peltier, S.T. and Ellisman, M.H. and Kirkland, A.I. and Xoung, N.-H.},
+  title = {Characterization of a direct detection device imaging camera for transmission electron microscopy},
+  journal = {Ultramicroscopy},
+  year = {2010},
+  volume = {110},
+  pages = {744-747}
+}
+@article{Lupini2010,
+  author = {Lupini, A.R. and Wang, P. and Nellist, P.D. and Kirkland, A.I. and Pennycook, S.J.},
+  title = {Aberration measurement using the Ronchigram contrast transfer function},
+  journal = {Ultramicroscopy},
+  year = {2010},
+  volume = {110},
+  pages = {891-898}
+}
+@article{Saxton1982,
+  author = {Saxton, W.O and Baumeister, W.},
+  title = {The correlation averaging of a regularly arranged bacterial cell envelope protein},
+  journal = {Journal of Microscopy},
+  year = {1982},
+  volume = {127},
+  number = {2},
+  pages = {127-138}
+}
+@article{Rudnaya2010,
+  author = {Rudnaya, M.E. and Mattheij, R.M.M. and Maubach, J.M.L.},
+  title = {Evaluating sharpness functions for automated scanning
+electron microscopy},
+  journal = {Journal of Microscopy},
+  year = {2010}
+}
+@proceedings{Brinkers2010,
+  title = {SINGLE MOLECULE DETECTION OF TUBERCULOSIS NUCLEIC ACID USING DARK FIELD TETHERED PARTICLE MOTION},
+  year = {2010},
+  month = {April 14-17},
+  address = {Rotterdam, The Netherlands},
+  organization = {IEEE International Symposium on Biomedical Imaging}
+}
+@article{Cordes2010,
+  author = {Cordes, T. and Vogelsang, J. and Anaya, M. and Spaguolo, C. and Gietl, A. and Summerer, W. and Herrmann, A. and {M\"ullen}, K. and Tinnefeld, P.},
+  title = {Single-Molecule Redox Blinking of Perylene Diimide
+Derivatives in Water},
+  journal = {Journal of the American Chemical Society},
+  year = {2010}
+}
+@article{Jiang2010,
+  author = {Jiang, L. and Liu, Z. and Georgieva, D. and Kuil, M.E. and Abrahams, J.P.},
+  title = {A novel approximation method of CTF amplitude correction of 3D single particle reconstruction},
+  journal = {Ultramicroscopy},
+  year = {2010}
+}
+@article{Dwyer2010,
+  author = {Dwyer, C.},
+  title = {Simulation of scanning transmission electron microscope images on desktop computers},
+  journal = {Ultramicroscopy},
+  year = {2010},
+  volume = {110},
+  pages = {195-198}
+}
+@article{Tamura2010,
+  author = {Tamrua, K. and Okayama, S. and Shimizu, R.},
+  title = {Third-order spherical aberration correction using multistage self-aligned quadrupole correction-lens systems},
+  journal = {Journal of Electron Microscopy},
+  year = {2010}
+}
+@article{Paik2009,
+  author = {Paik, D.H. and Seol, Y. and Halsey, W.A. and Perkins, T.T.},
+  title = {Integrating a High-Force Optical Trap with Gold Nanoposts and a Robust Gold-DNA Bond},
+  journal = {Nano Letters},
+  year = {2009},
+  volume = {9},
+  number = {8},
+  pages = {2978-2983}
+}
+@article{Oijen1998,
+  author = {Oijen, A.M. van and {K\"ohler}, J. and Schmidt, J. and {M\"uller}, M. and Brakenhoff, G.J.},
+  title = {3-Dimensional super-resolution by spectrally selective imaging},
+  journal = {Chemical Physics Letters},
+  year = {1998},
+  volume = {292},
+  pages = {183-187}
+}
+@article{Marzetta1993,
+  author = {Marzetta, T.L.},
+  title = {A Simple derivation of the constrained multiple parameter Cramer-Rao Bound},
+  journal = {IEEE Transactions on Signal Processing},
+  year = {1993},
+  volume = {41},
+  number = {6},
+  pages = {2247-2249}
+}
+@article{Mortensen2010,
+  author = {Mortensen, K.I. and Churchman, L.S. and Spudich, J.A. and Flyvbjerg},
+  title = {Optimized localization analysis for single-molecule tracking and super-resolution microscopy},
+  journal = {Nature Methods},
+  year = {2010}
+}
+@article{Chang2010,
+  author = {Chang, W-H. and Chiu, M.T.K. and CHen, C.-Y. and Yen, C.F. and Lin,Y.-C. and Weng, Y.-P. and Chang, J.-C. and Wu, Y.-M. and Cheng, H. and Fu, J. and Tu, I-P.},
+  title = {Zernike Phase Plate Cryoelectron Microscopy
+Facilitates Single Particle Analysis of Unstained
+Asymmetric Protein Complexes},
+  journal = {Structure},
+  year = {2010},
+  volume = {18},
+  pages = {17-27}
+}
+@article{Smith2010,
+  author = {Smith, C.S. and Joseph, N. and Rieger, B. and Lidke, K.A.},
+  title = {Fast, single-molecule localization that achieves theoretically minimum uncertainty},
+  journal = {Nature Methods},
+  year = {2010},
+  volume = {7},
+  number = {5},
+  pages = {373-375}
+}
+@article{Serge2008,
+  author = {Serge, A. and Bertaux, N. and Rigneault, H. and Marguet, D.},
+  title = {Dynamic multiple-target tracing to probe
+spatiotemporal cartography of cell membranes},
+  journal = {Nature Methods},
+  year = {2008},
+  volume = {5},
+  number = {8},
+  pages = {687-694}
+}
+@article{Aguet2005,
+  author = {Aguet, F. and Ville, D. van de and Unser, M.},
+  title = {Dynamic multiple-target tracing to probe spatiotemporal cartography of cell membranes},
+  journal = {Optics Express},
+  year = {2005},
+  volume = {13},
+  number = {26},
+  pages = {10503-10522}
+}
+@article{Harauz1997,
+  author = {Harauz, G. and Heel, M. van},
+  title = {Exact filters for general geometry three dimensional reconstruction},
+  journal = {Optik},
+  year = {1997},
+  volume = {78},
+  number = {4},
+  pages = {146-156}
+}
+@article{Lingwood2009,
+  author = {Lingwood, D. and Simons, K.},
+  title = {Lipid rafts as a membrane organizing principle},
+  journal = {Science},
+  year = {2009},
+  volume = {327},
+  pages = {46-53}
+}
+@article{Baddeley2010,
+  author = {Baddeley, D. and Cannell, M.B. and Soeller, C.},
+  title = {Visualization of localization microscopy data},
+  journal = {Microscopy and Microanalysis},
+  year = {2010},
+  volume = {16},
+  pages = {64-72}
+}
+@inbook{Krivanek2010,
+  author = {Krivanek, O.L. and Delby, N. and Keyse, R.J. and Murfitt, M.F. and Own, C.S. and Szilagyi, Z.S.},
+  title = {Advances in Imaging and Electron Physics},
+  year = {2010},
+  volume = {153},
+  pages = {121-160},
+  publisher = {Elsevier},
+  chapter = {Advances in Aberration-Corrected Scanning Transmission Electron Microscopy and Electron Energy-Loss Spectroscopy}
+}
+@article{Jaqaman2008,
+  author = {Jaqaman, K. and Loerke, D. and Mettlen, M. and Kuwara, H. and Grinstein, S. and Schmid, S.L. and Danuser, G.},
+  title = {Robust single-particle tracking in live-cell time-lapse sequences},
+  journal = {Nature Methods},
+  year = {2008},
+  volume = {5},
+  number = {8},
+  pages = {695-702}
+}
+@article{Li2010,
+  author = {Li, T. and Kheifets, S. and Medellin, D. and Raizen, M.G.},
+  title = {Measurement of the Instantaneous Velocity of a Brownian Particle},
+  journal = {Science},
+  year = {2010},
+  volume = {328},
+  pages = {1673-1676}
+}
+@article{Kwon2010,
+  author = {Kwon, O.-H. and Zewail, A.H.},
+  title = {4D Electron Tomography},
+  journal = {Science},
+  year = {2010},
+  number = {328},
+  pages = {1668-1673}
+}
+@article{Brinkers2009,
+  author = {Brinkers, S. and Dietrich, H.R.C. and Groote, F.H. de and Young, I.T. and Rieger, B.},
+  title = {The Persistence Length of Double Stranded {DNA} Determined Using Dark Field Tethered Particle Motion},
+  journal = {Journal of Chemical Physics},
+  year = {2009},
+  volume = {130},
+  number = {21},
+  pages = {215105}
+}
+@article{Snijdervanderas2009,
+  author = {Snijder-van As, M.I. and Rieger, B. and Joosten, B. and Figdor, C. and Subramaniam, V. and Kanger, J.S.},
+  title = {A hybrid total internal reflection fluorescence and optical tweezers microscope to study cell adhesion and membrane protein dynamics of single living cells },
+  journal = {Journal of Microscopy},
+  year = {2009},
+  volume = {223},
+  number = {1},
+  pages = {84-92}
+}
+@article{Faas2009,
+  author = {Faas, F.G.A. and Rieger, B. and Vliet, L.J. van and Cherny, D.I.},
+  title = {{DNA} deformations near charged surfaces: electron and atomic force microscopy views},
+  journal = {Biophysical Journal},
+  year = {2009},
+  volume = {97},
+  number = {4},
+  pages = {1148-1157}
+}
+@article{Castaldo2008,
+  author = {Castaldo, V. and  Hagen, C.W. Rieger, B. and Kruit, P.},
+  title = {Sputtering limits versus signal-to-noise limits in the observation of {Sn} balls in a {Ga+} microscope},
+  journal = {Journal of Vacuum Science and Technology B},
+  year = {2008},
+  volume = {26},
+  number = {6},
+  pages = {2107-2115}
+}
+@article{Lidke2010,
+  author = {Lidke, D.S. and Huang, F. and Post, J.N. and Rieger, B. and Thomas, J.L.and Pouyssegur, J. and Jovin, T.M. and Lenormand, P. },
+  title = {ERK nuclear translocation is dimerization-independent but controlled by the rate of phosphorylation},
+  journal = {Journal of Biological Chemistry},
+  year = {2010},
+  volume = {285},
+  pages = {3092-3102}
+}
+@inbook{Hagen2008,
+  author = {Hagen, G.M. and Lidke, K.A. and Rieger, B. and Lidke,  D.S. and Caarls, W. and  Arndt-Jovin, D.J. and Jovin, T.M.},
+  title = {Single Molecule Dynamics in Life Sciences},
+  year = {2008},
+  pages = {117-130},
+  editor = {Yanagida, T. and Ishii, Y.},
+  publisher = {Wiley},
+  chapter = {Dynamics of membrane receptors: single molecule tracking of quantm dot liganded epidermal growth factor}
+}
