source: qipapers.bib @ 780

@article{Vulovic2010,
  year = {2010},
  title = {A toolkit for the characterization of {CCD} cameras for transmission electron microscopy},
  pages = {97-109},
  journal = {Acta Crystallographica Section D},
  volume = {66},
  author = {Vulovic, M. and Rieger, B. and Vliet, L.J. van and Koster, A.J. and Ravelli, R.B.G.}
}
@article{Weber1981,
  year = {1981},
  title = {Resolution of the Fluorescence Lifetimes in a Heterogeneous System by Phase and Modulation Measurements},
  pages = {949-953},
  journal = {Journal of Physical Chemistry},
  volume = {85},
  author = {Weber, G.}
}
@article{Geman1984,
  number = {6},
  month = {November},
  year = {1984},
  title = {Stochastic Relaxation, {Gibbs} Distributions, and the {Bayesian} Restoration of Images},
  pages = {721--741},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {6},
  author = {Geman, S. and Geman, D.}
}
@article{Fernandez2006,
  year = {2006},
  title = {{CTF} determination and correction in electron cryotomography},
  pages = {587-596},
  journal = {Ultramicroscopy},
  volume = {106},
  author = {Fernandez, J.J. and Li, S. and Crowther, R.A.}
}
@article{Clemons2001,
  year = {2001},
  title = {Crystal Structure of the {30S} Ribosomal Subunit from Thermus thermophilus: Purification, Crystallization and Structure Determination},
  pages = {827-843},
  journal = {Journal of Molecualar Biology},
  volume = {310},
  author = {Clemons, W.M. Jr. and Brodersen, D.E. and McCutcheon, J.P. and May, J.L.C. and Carter, A.P. and Morgan-Warren, R.J. and Wimberly, B.T. and Ramakrishnan, V.}
}
@article{Keller2006,
  number = {8},
  year = {2006},
  title = {A Signal Processing Approach to Symmetry Detection},
  pages = {2198-2207},
  journal = {IEEE Transactions on Image Processing},
  volume = {15},
  author = {Keller, Y. and Shkolnisky, Y.}
}
@book{Hilbert2001,
  year = {1971},
  title = {Foundations of Geometry},
  address = { La Salle, Illinois},
  publisher = {Open Court},
  author = {Hilbert, D.}
}
@article{Gabor1946a,
  number = {26},
  month = {November},
  year = {1946},
  title = {Theory of Communication: Part I: Analysis of Information},
  pages = {429-441},
  journal = {Journal of the Institution of Electrical Engineers},
  volume = {93},
  author = {Gabor, D.}
}
@inproceedings{Vliet1998,
  year = {1998},
  title = {Recursive Gaussian Derivative Filters},
  booktitle = {{ICPR'98}, Proc. 14th Int. Conference on Pattern Recognition},
  pages = {509--514},
  editor = {Jain, A.K. and Venkatesh, S. and Lovell, B.C.},
  volume = {I},
  publisher = {IEEE Computer Society Press, Los Alamitos},
  author = {Vliet, L.J. van and Young, I.T. and Verbeek, P.W.}
}
@article{Ziegler2004,
  year = {2004},
  title = {Interface structure and atomic bonding characteristic in silicon nitride ceramics},
  pages = {1768-1770},
  journal = {Science},
  volume = {306},
  author = {Ziegler, A. and Idrobo, J.C. and Cinibulk, M.K. and Kisielowski, C. and Browning, N.D. and Ritchie, R.O.}
}
@inproceedings{Verbeek1992a,
  year = {1992},
  title = {An estimator of edge length and surface area in digitized {2D} and {3D} images},
  booktitle = {Proc. 11th IAPR Int. Conf. on Pattern Recognition},
  pages = {1--5},
  volume = {3},
  publisher = {IEEE Computer Society Press},
  author = {Verbeek, P.W. and Vliet, L.J. van}
}
@article{Gove1995,
  number = {6},
  year = {1995},
  title = {Brightness Perception, Illusory Contours, and Corticogeniculate Feedback},
  pages = {1027--1052},
  journal = {Visual Neuroscience},
  volume = {12},
  author = {Gove, A. and Grossberg, S. and Mingolla, E.}
}
@article{Whitehouse1974,
  year = {1974},
  title = {The Quantitative Morphology of Anisotropy Trabecular Bone},
  pages = {153--168},
  journal = {Journal of Microscopy},
  volume = {101},
  author = {Whitehouse, W.J.}
}
@phdthesis{Vliet1993,
  month = {October},
  year = {1993},
  title = {Grey-Scale Measurements in Multi-Dimensional Digitized Images},
  address = {Delft, The Netherlands},
  school = {Delft University of Technology},
  author = {Vliet, L.J. van}
}
@article{Scalettar1996,
  year = {1996},
  title = {Dispersion, aberration and deconvolution in multi-wavelength fluorescence images},
  pages = {50--60},
  journal = {Journal of Microscopy},
  volume = {182},
  author = {Scalettar, B.A. and Swedlow, J.R. and Sedat, J.W. and Agard, D.A.}
}
@article{Vliet1990,
  number = {1},
  year = {1990},
  title = {The {Athena} Semi-Automated Katyotyping System},
  pages = {51--58},
  journal = {Cytometry},
  volume = {11},
  author = {Vliet, L.J. van and Young, I.T. and Mayall, B.H.}
}
@misc{Vliet1995,
  month = {October},
  year = {1995},
  title = {Segmentation of Overlapping Objects},
  howpublished = {in L.J. van Vliet and I.T. Young (eds), Abstracts of the ASCI Imaging Workshop, Venray, The Netherlands, 5-6},
  author = {Vliet, L.J. van. and Verbeek, P.W.}
}
@techreport{Vliet1996,
  number = {WC/40930},
  year = {1996},
  title = {Texture Analysis and Segmentation of Subsurface Images},
  institution = {Shell},
  author = {Vliet, L.J. van and Verbeek, P.W.}
}
@inproceedings{Vliet1994,
  year = {1994},
  title = {Better geometric measurements based on photometric information},
  booktitle = {Proc. IEEE Instrumentation and Measurement Technology Conf. IMTC94},
  pages = {1357--1360},
  author = {Vliet, L.J. van and Verbeek, P.W.}
}
@inproceedings{Vliet1999,
  month = {June 7-11},
  year = {1999},
  title = {Improving spatial resolution in exchange of temporal resolution in aliased image sequence},
  booktitle = {Proc. 11th Scandinavian Conference on Image Analysis},
  pages = {493--499},
  editor = {Ersboll, B.K. and Johansen,P. },
  address = {Lyngby},
  publisher = {Pattern Recognition Society of Denmark},
  author = {Vliet, L.J. van and Luengo Hendriks, C.L.}
}
@article{Haque1985,
  number = {6},
  month = {December},
  year = {1985},
  title = {A Two-Dimensional Fast Cosine Transform},
  pages = {1532--1538},
  journal = {IEEE Transactions on Acoustics, Speech and Signal Processing},
  volume = {33},
  annote = {key_fft},
  author = {Haque, M.A.}
}
@inproceedings{Ridder2000,
  month = {Bristol, UK},
  year = {2000},
  title = {Probabilistic {PCA} and {ICA} subspace mixture models for image segmentation},
  booktitle = {Proceedings British Machine Vision Conference 2000},
  pages = {112-121},
  editor = {Mirmehdi, M. and Thomas, B.},
  author = {Ridder, D. de and Kittler, J. and Duin, R.P.W.},
  organization = {BMVA}
}
@techreport{Nordberg1992,
  year = {1992},
  title = {Signal Representation using Operators},
  note = {LiTH-ISY-I-1342},
  institution = {{Link\"oping University}},
  author = {Nordberg, K. and Knutsson, H. and Granlund, G.H.}
}
@techreport{Nordberg1993,
  year = {1993},
  title = {On the Invariance of the Orientation and the Tensor Field Representation},
  note = {LiTH-ISY-R-1530 },
  address = {{Link\"oping}, Sweden},
  institution = {{Link\"oping} University},
  author = {Nordberg, K. and Knutsson, H. and Granlund, G.H.}
}
@inproceedings{Aguado1995,
  month = {4--6 July},
  year = {1995},
  title = {Ellipse Detection via Gradient Direction in the {Hough} Transform},
  booktitle = {Fifth International Conference on Image Processing and its Applications},
  pages = {375--378},
  author = {Aguado, A.S. and Montiel, M.E. and Nixon, M.S.}
}
@techreport{Nordberg1995,
  year = {1995},
  title = {Local Curvature from Gradients of the Orientation Tensor Field},
  note = {LiTH-ISY-R-1783},
  address = {{Link\"oping}, Sweden},
  institution = {{Link\"oping University}},
  author = {Nordberg, K. and Knutsson, H. and Granlund, G.H.}
}
@article{HautaKasari1999,
  year = {1999},
  title = {Multi-Spectral Texture Segmentation Based on the Spectral Co-occurrence Matrix},
  pages = {275--284},
  journal = {Pattern Analysis {\&} Applications},
  volume = {2},
  author = {Hauta-Kasari, M. and Parkkinen J. and Jaaskelainen, T. and Lenz, R.}
}
@book{Sethian1996,
  year = {1996},
  title = {Level Set Methods and Fast Marching Methods: Evolving Interfaces in Computational Geometry, Fluid Mechanics, Computer Vision, and Materials Science},
  address = {Cambridge},
  publisher = {Cambridge University Press},
  author = {Sethian, J. A.}
}
@techreport{Nordberg1994,
  number = {{LiTH-ISY-I-1552}},
  year = {1994},
  title = {Representation and Learning of Invariance},
  institution = {{Link\"oping University}},
  author = {Nordberg, K. and Granlund, G.H. and Knutsson, H.}
}
@article{Eberly1991,
  number = {6},
  month = {November},
  year = {1991},
  title = {On Gray Scale Image Measurements. {I}. Arc Length and Area},
  pages = {538--549},
  journal = {CVGIP: Graphical Models and Image Processing},
  volume = {53},
  author = {Eberly, D. and Lancaster, J.}
}
@book{Hearn1997,
  edition = {2},
  year = {1997},
  title = {Computer Graphics},
  address = {Englewood Cliffs, New Jersey},
  publisher = {Prentice Hall},
  author = {Hearn,D. and Baker, M.P. }
}
@inproceedings{Knutsson1985,
  month = {November 18-20},
  year = {1985},
  title = {Producing a Continuous and Distance Preserving 5-D Vector Representation of 3-D Orientation},
  booktitle = {IEEE Computer Society Workshop on Computer Architecture for Pattern Analysis and Image Database Management},
  pages = {175--182},
  publisher = {Miami Beach, Florida},
  author = {Knutsson, H.}
}
@article{Daulton2006,
  year = {2006},
  title = {Determination of chromium valence over the range {Cr(0)-Cr(VI)} by electron energy loss spectroscopy},
  pages = {561-573},
  journal = {Ultramicroscopy},
  volume = {106},
  author = {Daulton, T.L. and Little, B.J.}
}
@inproceedings{Knutsson1980,
  month = {December},
  year = {1980},
  title = {Fourier Domain Design of Line and Edge Detectors},
  booktitle = {Proceedings of the 5th International Conference on Pattern Recognition},
  address = {Miami, Florida},
  author = {Knutsson, H. and Granlund, G. H.}
}
@inproceedings{Knutsson1989,
  month = {June 19-22},
  year = {1989},
  title = {Representing Local Structure Using Tensors},
  booktitle = {The 6th Scandinavian Conference on Image Analysis},
  pages = {244--251},
  address = {Oulu, Finland},
  author = {Knutsson, H.}
}
@article{Knutsson1983,
  number = {3},
  month = {March},
  year = {1983},
  title = {Anisotropic Non-Stationary Image Estimation and its Applications --- {P}art {I}: {R}estoration of Noisy Images},
  pages = {388--397},
  note = {Report LiTH--ISY--I--0462, {Link\"oping} University, Sweden, 1981},
  journal = {IEEE Transactions on Communications},
  volume = {31},
  author = {Knutsson, H. and Wilson, R. and Granlund, G.H.}
}
@phdthesis{Knutsson1982,
  year = {1982},
  title = {Filtering and Reconstruction in Image Processing},
  address = {{Link\"oping, Sweden}},
  school = {{Link\"oping University}},
  author = {Knutsson, H.}
}
@article{Kothleitner2003,
  year = {2003},
  title = {{EELS} performance measurements on a new high energy resolution imaging filter},
  pages = {211-218},
  journal = {Micron},
  volume = {34},
  author = {Kothleitner, G. and Hofer, F.}
}
@article{Bowie1977,
  number = {5},
  year = {1977},
  title = {An Analysis Technique for Biological Shape -- {II}},
  pages = {455--464},
  journal = {Acta Cytologica},
  volume = {21},
  author = {Bowie, J.E. and Young, I.T.}
}
@article{Tiemeijer1999,
  year = {1999},
  title = {Measurement of Coulomb interactions in an electron beam monochromator},
  pages = {53-62},
  journal = {Ultramicroscopy},
  volume = {78},
  author = {Tiemeijer, P.C.}
}
@article{Osher1990,
  number = {4},
  month = {August},
  year = {1990},
  title = {Feature-Oriented Image Enhancement Using Shock Filters},
  pages = {919--940},
  journal = {SIAM J. Numer. Anal.},
  volume = {27},
  author = {Osher, S. and Rudin, L.I.}
}
@article{Hsu1990,
  year = {1990},
  title = {Partitioned {H}ough Transform for Ellipsoid Detection},
  pages = {275--282},
  journal = {Pattern Recognition},
  volume = {23},
  annote = {key_radon},
  author = {Hsu, C.-C. and Huang, J.S.}
}
@article{Fan2000,
  number = {1},
  year = {2000},
  title = {Digital imaging in transmission electron microscopy},
  pages = {1-13},
  journal = {Journal of Microscopy},
  volume = {200},
  author = {Fan, G.Y. and Ellisman, M.H.}
}
@inproceedings{Ramasse2004,
  year = {2004},
  title = {Diagnosis of aberrations from crystalline samples in aberration corrected {STEM}},
  booktitle = {13th European Microscopy Congress EMC 2004 (August 22-27, Antwerpen, Belgium)},
  pages = {1-2},
  author = {Ramasse, Q.M. and Bleloch, A.L.},
  organization = {European Microscopy Society}
}
@inproceedings{Weijer2001b,
  month = {Dec. },
  year = {2001},
  title = {Local Mode Filtering},
  booktitle = {CVPR'01},
  address = {Kauai, Hawaii, USA},
  author = {J. van de Weijer and R. van den Boomgaard}
}
@article{Krivanek1999,
  year = {1999},
  title = {Towards sub- electron beams},
  pages = {1-11},
  journal = {Ultramicroscopy},
  volume = {78},
  author = {Krivanek, O.L. and Dellby, N. and Lupini, A.R.}
}
@article{Stockwell1996,
  number = {4},
  month = {April},
  year = {1996},
  title = {Localization of the Complex Spectrum: the {S} Transform},
  pages = {998--1001},
  journal = {IEEE Transactions on Signal Processing},
  volume = {44},
  author = {Stockwell, R.G. and Mansinha, L. and Lowe, R.P.}
}
@article{Ramasse2005,
  year = {2005},
  title = {Diagnosis of aberrations from crystalline samples in scanning transmission electron microscopy},
  journal = {Ultramicroscopy},
  author = {Ramasse, Q.M. and Bleloch, A.L.}
}
@inproceedings{Ramasse2003,
  year = {2003},
  title = {Wavelet image analysis in aberration-corrected scanning transmission electrion microscopy},
  booktitle = {Elextron Microscopy and Analysis Group Conference EMAG2003 (Oxford, UK)},
  pages = {343-345},
  author = {Ramasse, Q.M. and Bleloch, A.L.},
  organization = {IOP Publishing Ltd}
}
@article{Dekker2001,
  year = {2001},
  title = {Does a monochromator improve the precision in quantitative {HRTEM}?},
  pages = {275-290},
  journal = {Ultramicroscopy},
  volume = {89},
  author = {Dekker, A.J. den and Aert, S. van and Dyck, D. van and Bos, A. van den and Geuens, P.}
}
@article{Ballard1981,
  number = {2},
  year = {1981},
  title = {Generalizing the {Hough} Transform to Detect Arbitrary Shapes},
  pages = {111--122},
  journal = {Pattern Recognition},
  volume = {13},
  annote = {key_radon},
  author = {Ballard, D.H.}
}
@book{Bass1995,
  year = {1995},
  title = {Handbook of Optics II},
  editor = {Bass, M},
  address = {New York},
  publisher = {McGraw-Hill}
}
@inproceedings{Worring1992,
  year = {1992},
  title = {The accuracy and precision of curvature estimation methods},
  booktitle = {Proceedings of the 11th IAPR International Conference on Pattern Recognition},
  pages = {139--142},
  address = {The Hague, The Netherlands},
  publisher = {IEEE Computer Society Press},
  author = {Worring, M. and Smeulders, A.W.M.}
}
@article{Uhlemann1998,
  year = {1998},
  title = {Residual wave aberrations in the first spherical aberration corrected transmission electron microscope},
  pages = {109-119},
  journal = {Ultramicroscopy},
  volume = {72},
  author = {Uhlemann, S. and Haider, M.}
}
@book{Sigel1988,
  year = {1988},
  title = {Nonparametric statistics for the behavioral sciences},
  address = {New York},
  publisher = {Mc Graw-Hill},
  author = {Siegel, S. and Castellan, N.J. Jr.}
}
@phdthesis{Eisele2002,
  month = {December},
  year = {2002},
  title = {Automatic Defect Detection and Evaluation in {X}-ray {CT} Images},
  address = {Heidelberg, Germany},
  school = {Ruprechts-Karls-{Universit\"at} University},
  author = {Eisele, H.}
}
@article{Lanzavecchia1999,
  year = {1999},
  title = {A Two-Exposure Technique for Ice-Embedded Samples Successfully Reconstructs the Chlorocruorin Pigment of Sabella spallanzanii at 2.1 nm Resolution},
  pages = {53-63},
  journal = {Journal of Structural Biology},
  volume = {127},
  author = {Lanzavecchia, S. and Wade, R.H. and Ghiretti Magaldi, A. and Tognon, G. and Bellon, P.L.}
}
@article{Demirel2005,
  year = {2005},
  title = {Clustering and diversity of fluctuations for proteins},
  pages = {41-46},
  journal = {Journal of Nanomedicine},
  volume = {1},
  author = {Demirel, M. and Cherny, D.I.}
}
@article{Cohen1997,
  number = {1},
  year = {1997},
  title = {Global minimum for active contour models: A minimal path approach},
  pages = {57-58},
  journal = {International Journal of Computer Vision},
  volume = {24},
  author = {Cohen, L.D. and Kimmel, R.}
}
@inproceedings{Geusebroek2002,
  series = {Lecture Notes in Computer Science},
  year = {2002},
  title = {Fast Anisotropic {G}auss Filtering},
  booktitle = {Proceedings of the ECCV 2002},
  pages = {99--112},
  editor = {Heyden, A.},
  volume = {2350},
  publisher = {Springer-Verlag},
  author = {Geusebroek, J.M. and Smeulders, A.W.M. and Weijer, J. van de}
}
@article{Geusebroek2003,
  number = {8},
  year = {2003},
  title = {Fast anisotropic gauss filtering},
  pages = {938-943},
  journal = {IEEE Transactions on Image Processing},
  volume = {12},
  author = {Geusebroek, J.M. and Smeulders, A.W.M. and Weijer, J. van de}
}
@article{Cohen1992,
  number = {3},
  month = {May},
  year = {1992},
  title = {Maximum Likelihood Unsupervised Textured Image Segmentation},
  pages = {239--251},
  journal = {CVGIP: Graphical Models and Image Processing},
  volume = {54},
  author = {Cohen, F.S. and Fan, Z.}
}
@article{Geusebroek2000,
  number = {1},
  year = {2000},
  title = {Robust autofocusing in microscopy},
  pages = {1-9},
  journal = {Cytometry},
  volume = {39},
  author = {Geusebroek, J.M. and Cornelissen, F. and Smeulders, A.W.M. and Geerts, H.}
}
@article{Delon2004,
  number = {3},
  title = {Photobleaching, Mobility, and Compartmentalisation: Inferences in Fluorescence Correlation Spectroscopy},
  pages = {255-267},
  journal = {Journal of Fluorescence},
  volume = {14},
  author = {Delon, A. and Usson, Y. and Derouard, J. and Biben, T. and Souchier, C.}
}
@article{Aldroubi2001,
  number = {4},
  year = {2001},
  title = {Nonuniform Sampling and Reconstruction in Shift-Invariant Spaces},
  pages = {585--620},
  journal = {SIAM Review},
  volume = {43},
  author = {Aldroubi, A. and {Gr\"ochenig}, K.}
}
@article{Barash2002,
  number = {6},
  year = {2002},
  title = {A Fundamental Relationship between Bilateral Filtering, Adaptive Smoothing, and the Nonlinear Diffusion Equation},
  pages = {844--847},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {24},
  author = {Barash, D.}
}
@inproceedings{Lorenz1997,
  series = {Lecture Notes in Computer Science},
  year = {1997},
  title = {A Multi-scale Line Filter with Automatic Scale Selection based on the {Hessian} Matrix for Medical Image Segmentation},
  booktitle = {Scale-Space Theory in Computer Vision, First International Conference},
  pages = {152--163},
  editor = {Haar Romeny, B.M. ter and Florack, L. and Koenderink, J.J. and Viergever, M.A.},
  volume = {1252},
  address = {Utrecht, The Netherlands},
  publisher = {Springer},
  author = {Lorenz, C. and Carlsen, I.-C. and Buzug, T.M. and Fassnacht, C. and Weese, J.}
}
@article{Leavers2000a,
  number = {12},
  month = {December},
  year = {2000},
  title = {Use of the Two-Dimensional {Radon} Transform to Generate a Taxonomy of Shape for the Characterization of Abrasive Powder Particles},
  pages = {1411--1423},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {22},
  annote = {key_radon},
  author = {Leavers, V.F.}
}
@book{Singh1992,
  year = {1992},
  title = {Optic Flow Computation: A Unified Perspective},
  publisher = {IEEE Computer Society Press},
  author = {Singh, A.}
}
@article{Foerster1948,
  number = {6},
  year = {1948},
  title = {{Zwischenmolekulare} {Energiewanderung} und {Fluoreszenz}},
  pages = {55--75},
  journal = {Annalen der Physik},
  volume = {2},
  author = {{F\"orster}, T.}
}
@article{Bigun1997,
  number = {3},
  year = {1997},
  title = {Pattern Recognition in Images by Symmetries and Coordinate Transformations},
  pages = {290--307},
  journal = {Computer Vision and Image Understanding},
  volume = {68},
  author = {{Big\"un}, J.}
}
@inproceedings{Bigun1996,
  month = {16--19 September},
  year = {1996},
  title = {Coordinate Transformations, Symmetries, and {GHT}},
  booktitle = {Proceedings of the International Conference on Image Processing},
  pages = {197--201},
  volume = {3},
  author = {{Big\"un}, J.}
}
@inproceedings{Bigun1994,
  title = {Speed, frequency, and orientation tuned 3-D Gabor filterbanks and their design},
  booktitle = {Proceedings of International Conference on Pattern Recognition, ICPR, Jerusalem},
  pages = {C-184--187},
  publisher = {IEEE Computer Society},
  author = {{Big\"un}, J.}
}
@book{Golub1996,
  edition = {3},
  year = {1996},
  title = {Matrix Computations},
  address = {Baltimore},
  publisher = {John Hopkins University Press},
  author = {G.H. Golub and C.F. van Loan}
}
@article{Jeulin1989,
  year = {1989},
  title = {Morphological Modeling of Images by Sequential Random Functions},
  pages = {403--431},
  journal = {Signal Processing},
  volume = {16},
  author = {Jeulin, D.}
}
@article{Kass1988,
  year = {1988},
  title = {Snakes: Active Contour Models},
  pages = {321--331},
  journal = {International Journal of Computer Vision},
  author = {Kass, M. and Witkin, A. and Terzopoulos, D.}
}
@article{Bigun1991,
  number = {8},
  year = {1991},
  title = {Multidimensional Orientation Estimation with Applications to Texture Analysis and Optical Flow},
  pages = {775--790},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {13},
  author = {{Big\"un}, J. and Granlund, G.H. and Wiklund, J.}
}
@inproceedings{Luengo2000a,
  month = {June 14-16},
  year = {2000},
  title = {Morphological Scale-Space to Differentiate Microstructures of Food Products},
  booktitle = {Proceedings of the third annual conference of the Advanced School for Computing and Imaging (Heijen, the Netherlands)},
  pages = {289--293},
  editor = {{L.J. van Vliet et al.}},
  author = {Luengo Hendriks, C.L. and Vliet, L.J. van}
}
@article{Bahlmann2000,
  number = {5},
  year = {2000},
  title = {Depolarization by high aperture focusing},
  pages = {612-614},
  journal = {Applied Physics Letters},
  volume = {77},
  author = {Bahlmann, K. and Hell, S.W.}
}
@article{Dubuc2001,
  number = {1--2},
  year = {2001},
  title = {Complexity, Confusion, and Perceptual Grouping. Part {I}: The Curve-like Representation},
  pages = {55--82},
  journal = {Journal of Mathematical Imaging and Vision},
  volume = {15},
  author = {Dubuc, B. and Zucker, S.W.}
}
@book{Boor2001,
  year = {2001},
  title = {A Practical Guide to Splines},
  address = {New York},
  publisher = {Springer-Verlag},
  author = {de Boor, Carl}
}
@article{Vermolen2004,
  year = {2004},
  title = {{3D} Restoration With Multiple Images Acquired by a Modified Conventional Microscope},
  pages = {113-125},
  journal = {Microscopy Research and Technique},
  volume = {64},
  author = {Vermolen, B.J and Garini, Y. and Young, I.T.}
}
@article{Kass1987,
  year = {1987},
  title = {Analyzing Oriented Patterns},
  pages = {362--385},
  journal = {Computer Vision, Graphics and Image Processing},
  volume = {37},
  author = {Kass, M. and Witkin, A.}
}
@article{Ocuna1992,
  number = {3},
  month = {May},
  year = {1992},
  title = {Texture Modeling using {G}ibbs Distribution},
  pages = {210--222},
  journal = {CVGIP: Graphical Models and Image Processing},
  volume = {54},
  author = {Ocuna, C.O.}
}
@book{Jaehne1993,
  series = {Lecture Notes in Computer Science},
  number = {751},
  year = {1993},
  title = {Spatio-Temporal Image Processing},
  editor = {Goos, G. and Hartmanis, J.},
  address = {Berlin},
  publisher = {Springer-Verlag},
  author = {{J\"ahne}, B.}
}
@misc{Moller2000,
  year = {2000},
  title = {Aspects of Spatial Statistics, Stochastic Geometry and {Markov} Chain Monte Carlo Methods},
  note = {D. Sc. thesis},
  howpublished = {www},
  author = {{M\oe ller}, J.}
}
@article{Nagy2003,
  number = {1},
  year = {2003},
  title = {Small interfering {RNA}s suppress the expression of endogenous and {GFP}-fused epidermal growth factor receptor (erbB1) and induce apoptosis in erbB1-overexpressing cells},
  pages = {39-49},
  journal = {Experimental Cell Research},
  volume = {285},
  author = {Nagy, P. and Ardent-Jovin, D.J. and Jovin, T.M.}
}
@book{Greiner1993,
  edition = {2},
  year = {1993},
  title = {Theoretische Physik, Thermodynamik und statische Mechanik},
  address = {Frankfurt},
  publisher = {Verlag Harri Deutsch},
  author = {Greiner, W. and Neise, L. and {St\"ocker}, H.}
}
@inproceedings{Soille2000,
  series = {Lecture Notes on Computer Science},
  year = {2000},
  title = {Morphological Operators with Discrete Line Segments},
  booktitle = {DGCI 2000, 9th Discrete Geometry for Computer Imagery},
  pages = {78--98},
  editor = {Borgefors, G. and {Nystr\"om}, I. and Sanniti di Baja, G.},
  volume = {1953},
  publisher = {Springer},
  author = {Soille, P.}
}
@article{Ringach1996,
  number = {19},
  year = {1996},
  title = {Spatial and Temporal Properties of Illusory Contours and Amodal Boundary Completion},
  pages = {3037--3050},
  journal = {Vision Research},
  volume = {36},
  author = {Ringach, D.L. and Shapley, R.}
}
@article{Horn1981,
  year = {1981},
  title = {Determining Optical Flow},
  pages = {185--203},
  journal = {Artificial Intelligence},
  volume = {17},
  author = {Horn, B.K.P. and Schunck, B.G.}
}
@techreport{Horn1980,
  month = {April},
  year = {1980},
  title = {Determining Optical Flow},
  note = {A.I. Memo No. 572},
  institution = {Massachusetts Institute of Technology},
  author = {Horn, B.K.P. and Schunck, B.G.}
}
@misc{Verbeek1993a,
  year = {1993},
  title = {The {GST} as local mean squared friction},
  howpublished = {private communications},
  author = {Verbeek, P.W.}
}
@article{Boutin2000,
  number = {3},
  year = {2000},
  title = {Numerically Invariant Signature Curves},
  pages = {235--248},
  journal = {International Journal of Computer Vision},
  volume = {40},
  author = {Boutin, M.}
}
@article{Bettini1980,
  number = {9},
  year = {1980},
  title = {Microscopic persistence length of {DNA: Its} relation to average molecular dimensions},
  pages = {1689-1694},
  journal = {Biopolymers},
  volume = {19},
  author = {Bettini, A. and Pozzan, M.R. and Valdevit, E. and Frontali, C.}
}
@inproceedings{Ginkel2000,
  month = {June 14-16},
  year = {2000},
  title = {Robust Curvature Estimation by Finding Optimal Circular Segments in Orientation Space},
  booktitle = {ASCI2000, Proc. 6th Annual Conference of the Advanced School for Computing and Imaging (Lommel, Belgium)},
  pages = {299--306},
  editor = {Vliet, L.J. van and Heijnsdijk, J.W.K. and Kielmann, T. and Knijnenburg, P.M.W.},
  author = {Ginkel, M. van and Vliet, L.J. van and Verbeek, P.W.},
  organization = {ASCI, Delft}
}
@inproceedings{Ginkel2001,
  month = {May 30--June 1},
  year = {2001},
  title = {Robust Curve Detection using a Radon Transform in Orientation Space Applied to Fracture Detection in Borehole Images},
  booktitle = {ASCI2001, Proc. 7th Annual Conference of the Advanced School for Computing and Imaging (Heijen, the Netherlands)},
  pages = {84--91},
  editor = {Lagendijk, R.L. and Heijnsdijk, J.W.J. and Pimentel, A.D. and Wilkinson, M.H.F.},
  author = {Ginkel, M. van and Vliet, L.J. van and Verbeek, P.W. and Kraaijveld, M.A. and Reding, E.P.},
  organization = {ASCI, Delft}
}
@inproceedings{Ginkel2003,
  series = {Lecture Notes in Computer Science 2749},
  month = {June 29--July 2},
  year = {2003},
  title = {Robust Curve Detection Using a {Radon} Transform in Orientation Space},
  booktitle = {Proceedings of the 13th Scandinavian Conference on Image Analysis},
  pages = {125--132},
  editor = {{Big\"un}, J. and Gustavsson, T.},
  publisher = {Springer},
  author = {Ginkel, M. van and Kraaijveld, M.A. and Vliet, L.J. van and Reding, E.P. and Verbeek, P.W. and Lammers, H.J.}
}
@article{Jonker2002,
  number = {6},
  year = {2002},
  title = {Skeletons in {N} Dimensions using Shape Primitives},
  pages = {677--686},
  journal = {Pattern Recognition Letters},
  volume = {23},
  author = {Jonker, P.P.}
}
@phdthesis{Ginkel2002,
  year = {2002},
  title = {Image Analysis using Orientation Space based on Steerable Filters},
  note = {digital version available:\\\ {\small\tt http://www.ph.tn.tudelft.nl/PHDTheses/MvGinkel/thesis\_vanginkel.html}},
  address = {Delft, The Netherlands},
  school = {Delft University of Technology},
  author = {Ginkel, M. van}
}
@article{Chen1989a,
  number = {7},
  year = {1989},
  title = {A Multiscaling Approach Based on Morphological Filtering},
  pages = {694--700},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {11},
  author = {Chen, M.-H. and Yan, P.-F.}
}
@article{Zhou2001a,
  number = {24},
  year = {2001},
  title = {Direct Evidence for the Size and Conformational Variability of the Pyruvate Dehydrogenase Complex Revealed by Three-dimensional Electron Microscopy},
  pages = {21704-21713},
  journal = {Journal of Biological Chemistry},
  volume = {276},
  author = {Zhou, Z.H. and Liao, W. and Cheng, R.H. and Lawson, J.E. and McCarthy, D.B. and Reed, L.J. and Stoops, J.K.}
}
@article{Verwer1989,
  number = {4},
  month = {April},
  year = {1989},
  title = {An Efficient Uniform Cost Algorithm Applied to Distance Transforms},
  pages = {425--429},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {11},
  author = {Verwer, B.J.H. and Verbeek, P.W. and Dekker, S.T.}
}
@techreport{Ginkel2004,
  month = {December},
  year = {2003},
  title = {An short introduction to the Radon and Hough transforms and how they relate to each other},
  note = {Technical Report PH-2003-03},
  institution = {Pattern Recognition Group, Delft University of Technology},
  author = {Ginkel, M. van and Luengo Hendriks, C.L. and Vliet, L.J. van}
}
@inproceedings{Verwer1988,
  month = {November},
  year = {1988},
  title = {Improved metrics in image processing applied to the Hilditch skeleton},
  booktitle = {Proceedings of the 9th IAPR international conference on pattern recognition (ICPR), (Rome, Italy)},
  pages = {137--142},
  author = {Verwer, B.J.H.}
}
@article{Beaucage1997,
  year = {1997},
  title = {Persistence Length of Isotactic Poly(hydroxy butyrate)},
  pages = {4158-4162},
  journal = {Macromolecules},
  volume = {30},
  author = {Beaucage, G. and Rane, S. and Sukumaran, S. and Satkowski, M.M. and Schechtman, L.A. and Doi, Y.}
}
@article{Dyck2004,
  year = {2004},
  title = {Physical Limits on Atomic Resolution},
  pages = {153-157},
  journal = {Microscopy and Microanalysis},
  volume = {10},
  author = {Dyck, D. van and Aert, S. van and Dekker, A.J. den}
}
@article{Dyck2003,
  year = {2003},
  title = {Is atomic resolution transmission electron microscopy able to resolve and re ne amorphous structures?},
  pages = {27-42},
  journal = {Ultramicroscopy},
  volume = {98},
  author = {Dyck, D. van and Aert, S. van and Dekker, A.J. den and Bos, A. van den}
}
@article{Bastiaens1996,
  number = {16},
  year = {1996},
  title = {Imaging the intracellular trafficking and state of the {AB$_5$} quaternary structure of cholera toxin},
  pages = {4246-4253},
  journal = {The EMBO Journal},
  volume = {15},
  author = {Bastiaens, P.I.H. and Majoul, I.V. and Verveer, P.J. and {S\"oling}, H.-D. and Jovin, T.M.}
}
@article{Lanzavecchia2005,
  year = {2005},
  title = {Conical tomography of freeze-fracture replicas: a method for the study of integral membrane proteins inserted in phospholipid bilayers},
  pages = {87-98},
  journal = {Journal of Structural Biology},
  volume = {149},
  author = {Lanzavecchia, S. and Cantele, F. and Bellon, P.L. and Zampighi, L. and Kreman, M. and Wrigth, E. and Zampighi, G.A.}
}
@article{Chang1997,
  number = {2},
  year = {1997},
  title = {Fast algorithm for point pattern matching: {I}nvariant to translations, rotations and scale changes},
  pages = {311-320},
  journal = {Pattern Recognition},
  volume = {30},
  author = {Chang, S.-H. and Cheng, F.-H. and Hsu, W.-H.and Wu, G.-Z.}
}
@inproceedings{Froment1999,
  series = {Lecture Notes in Computer Science},
  year = {1999},
  title = {A Compact and Multiscale Image Model Based on Level Sets},
  booktitle = {Scale-Space Theories in Computer Vision},
  pages = {152--163},
  publisher = {Springer Verlag},
  author = {Froment, J.}
}
@article{Quintanilla1997,
  year = {1997},
  title = {Clustering in a Continuum Percolation Model},
  pages = {327--336},
  journal = {Adv. Appl. Probab.},
  volume = {29},
  author = {Quintanilla, J. and Torquato, S.}
}
@article{Quintanilla1999,
  number = {13},
  month = {October},
  year = {1999},
  title = {Percolation for a model of statistically inhomogeneous random media},
  journal = {Journal of Chemical Physics},
  volume = {111},
  author = {Quintanilla, J. and Torquato, S.}
}
@article{Lindeberg1994a,
  number = {2},
  year = {1994},
  title = {Scale-space Theory: A Basic Tool for Analyzing Structures at Different Scales},
  pages = {224--270},
  journal = {Journal of Applied Statistics},
  volume = {21},
  author = {Lindeberg, T.}
}
@inproceedings{Maragos1999,
  series = {Lecture Notes on Computer Science},
  month = {September},
  year = {1999},
  title = {Nonlinear PDEs and Numerical Algorithms for Modeling Levelings and Reconstruction Filters},
  booktitle = {Scale-Space Theories in Computer Vision (Second International Conference, Scale-Space'99, Corfu, Greece)},
  pages = {363--374},
  editor = {Nielsen, Mads and Johansen, Peter and Olsen, Ole F. and Weickert, Joachim},
  volume = {1682},
  address = {Berlin Heidelberg},
  publisher = {Springer-Verlag},
  author = {Maragos, Petros and Meyer, Fernand}
}
@article{Cooley1965,
  month = {April},
  year = {1965},
  title = {An algorithm for the machine calculation of complex {Fourier} series},
  pages = {297--301},
  journal = {Math. Comp.},
  volume = {19},
  annote = {key_fft},
  author = {Cooley, J.W. and Tukey, J.W.}
}
@article{Bruin2004,
  year = {2004},
  title = {Interactive {3D} segmentation using connected orthogonal contours},
  pages = {1-18},
  journal = {Computers in Biology and Medicine},
  volume = {34},
  author = {Bruin, P.W. de and Dercksen, V.J. and Post, F.H. and Vosselpoel, A.M. and Streekstra, G.J. and Vos, F.M.}
}
@incollection{Bastiaens1998,
  edition = {second},
  year = {1998},
  title = {Fluorescence Resonance Energy Transfer Microscopy},
  booktitle = {Cell Biology: A Laboratory Handbook},
  pages = {99-117},
  address = {New York},
  publisher = {Academic Press},
  author = {Bastiaens, I.H. and Jovin, T.M.}
}
@article{Maragos1995,
  number = {4},
  year = {1995},
  title = {Slope Transforms: Theory and Application to Nonlinear Signal Processing},
  pages = {864-877},
  journal = {IEEE Transactions on Signal Processing},
  volume = {43},
  author = {Maragos, Petros}
}
@inproceedings{Bakker1999,
  year = {1999},
  title = {Edge preserving orientation adaptive filtering},
  booktitle = {Conference on Computer Vision and Pattern Recognition},
  pages = {535--540},
  volume = {2},
  address = {Los Alamitos, CA, USA},
  publisher = {IEEE Computer Society Press},
  author = {Bakker, P. and Vliet, L.J. van and Verbeek, P.W.}
}
@article{Mokhtarian2001,
  year = {2001},
  title = {Curvature Computation on Free-Form 3-D Meshes at Multiple Scales},
  pages = {118--139},
  journal = {Computer Vision and Image Under Standing},
  volume = {83},
  author = {Mokhtarian, F. and Khalili, N. and Yuen, P.}
}
@phdthesis{Scharr2000,
  month = {May},
  year = {2000},
  title = {Optimale Operatoren in der Digitalen Bildverarbeitung},
  address = {Heidelberg, Germany},
  school = {Ruprechts-Karls-{Universit\"at} University},
  author = {Scharr, H.}
}
@article{Hell2003,
  number = {11},
  year = {2003},
  title = {Towards fluorescence nanoscopy},
  pages = {1347-1355},
  journal = {Nature Biotechnology},
  volume = {21},
  author = {Hell, S.W.}
}
@techreport{Goutsias1996,
  year = {1996},
  title = {{M}arkov Random Fields: Interacting Particle Systems for Statistical Image Modeling and Analysis},
  institution = {Department of Electrical and Computer Engineering, The Johns Hopkins University, USA},
  author = {Goutsias, J.}
}
@article{Hell2004,
  number = {5},
  year = {2004},
  title = {Concepts for nanoscale resolution in fluorescence microscopy},
  pages = {599-609},
  journal = {Current Opinion in Neurobiology},
  volume = {14},
  author = {Hell, S.W. and Dyba, M. and Jackobs, S.}
}
@article{Mouche1999,
  year = {1999},
  title = {Structural Comparison of Cephalopod Hemocyanins: Phylogenetic Significance},
  pages = {199-212},
  journal = {Journal of Structural Biology},
  volume = {127},
  author = {Mouche, F. and Boisset, N. and Lamy, J. and Zal, F. and Lamy, J.N.}
}
@book{Lipson2001,
  edition = {3rd edition},
  year = {2001},
  title = {Optical Physics},
  address = {Cambridge},
  publisher = {Cambridge University Press},
  author = {Lipson, S.G. and Lipson, H. and Tannhauser, D.S.}
}
@article{Winograd1978,
  number = {141},
  month = {January},
  year = {1978},
  title = {On Computing the Discrete {Fourier} Transform},
  pages = {175--199},
  journal = {Mathematics of Computation},
  volume = {32},
  annote = {key_fft},
  author = {Winograd, S.}
}
@article{Narasimha1978,
  month = {June},
  year = {1978},
  title = {On the computation of the discrete cosine transform},
  pages = {934--936},
  journal = {IEEE Transactions on Communications},
  volume = {26},
  annote = {key_fft},
  author = {Narasimha, M.J. and Peterson, A.M.}
}
@article{Rajagopal1959,
  number = {2},
  month = {February},
  year = {1959},
  title = {Statistical Theory of Particle Size Distributions in Emulsions and Suspensions},
  pages = {85--92},
  journal = {Kolloid-Zeitschrift},
  volume = {162},
  author = {Rajagopal, E.S.}
}
@article{Lindek1996,
  number = {3},
  year = {1996},
  title = {Optical transfer functions for confocal theta fluorescence microscopy},
  pages = {479--482},
  journal = {Journal of the Optical Society of America A},
  volume = {13},
  author = {Lindek, S. and Stelzer, E.H.K.}
}
@article{Winograd1976,
  number = {4},
  month = {April},
  year = {1976},
  title = {On Computing the Discrete {Fourier} Transform},
  pages = {1005--1006},
  journal = {Proc. Nat. Acad. Sci. USA},
  volume = {73},
  annote = {key_fft},
  author = {Winograd, S.}
}
@article{Genovesio2006,
  number = {5},
  year = {2006},
  title = {Tracking in {3-D+t} Microscopy: Method and Application to the Tracking of Endocytosed Quantum Dots},
  pages = {1062-1070},
  journal = {IEEE Transactions on Image Processing},
  volume = {15},
  author = {Genovesio, A. and Liedl, T. and Emiliani, V. and Parak, W.J. and Coppey-Moisan, M. and Olivo-Marin, J.-C.}
}
@article{Vliet1988,
  number = {1},
  year = {1988},
  title = { A contour processing method for fast binary neighbourhood operations},
  pages = {27--36},
  journal = {Pattern Recognition Letters},
  volume = {7},
  author = {Vliet, L.J. van and Verwer, B.J.H.}
}
@article{Vliet1989,
  number = {2},
  year = {1989},
  title = {A nonlinear Laplace operator as edge detector in noisy images},
  pages = {167--195},
  journal = {Computer Vision, Graphics and Image Processing},
  volume = {45},
  author = {Vliet, L.J. van and Young, I.T. and Beckers, A.L.D.}
}
@inproceedings{Rieger2002b,
  month = {August 11-15},
  year = {2002},
  title = {Curvature estimation of surfaces in 3D grey-value images},
  booktitle = {ICPR'02, Proc. 16th Int. Conf. on Pattern Recognition},
  editor = {R. Kasturi, D. Laurendeau, C. Suen},
  volume = {1},
  author = {Rieger, B. and Timmermans, F.J. and Vliet, L.J. van and Verbeek, P.W. },
  organization = {IEEE Computer Society}
}
@inproceedings{Hall1996,
  month = {June 16-19},
  year = {1996},
  title = {Automatic Extraction and Characterization of Geological Features and Textures from Borehole Images and Core Photographs},
  booktitle = {SPWLA 37th Annual Logging Symposium},
  author = {Hall, J. and Ponzi, M. and Gonfalini, M. and Maletti, G.}
}
@article{Herk1992,
  month = {July},
  year = {1992},
  title = {A Fast Algorithm for Local Minimum and Maximum Filters on Rectangular and Octagonal Kernels},
  pages = {517--521},
  journal = {Pattern Recognition Letters},
  volume = {13},
  author = {Herk, M. van}
}
@inproceedings{Rieger2002a,
  month = {June},
  year = {2002},
  title = {Estimation of curvature on surfaces in 3D grey-value images},
  booktitle = {Proc. ASCI 2002, 8th Annual Conf. of the Advanced School for Computing and Imaging},
  pages = {170--177},
  author = {Rieger, B. and Timmermans, F.J. and Vliet, L.J. van}
}
@article{Sethian1985,
  year = {1985},
  title = {Curvature and the Evolution of Fronts},
  pages = {487--499},
  journal = {Communications in Mathematical Physics},
  volume = {101},
  author = {Sethian, J.A.}
}
@book{Oneill1997,
  year = {1997},
  title = {Elementary Differential Geometry},
  address = {New York},
  annote = {ph2540},
  publisher = {Academic Press},
  author = {B. O'Neill}
}
@book{Gray1994,
  year = {1994},
  title = {Modern Differential Geometry of Curves and Surfaces},
  address = {Florida},
  publisher = {CRC Press},
  author = {Gray, A.}
}
@techreport{Knutsson1995,
  year = {1995},
  title = {Robust N-Dimensional Orientation Estimation using Quadrature Filters and Tensor Whitening},
  note = {LiTH-ISY-R-1798},
  institution = {{Link\"oping} University, Sweden},
  author = {Knutsson, H. and Andersson, M.T.}
}
@book{Fisher1993,
  year = {1993},
  title = {Statistical Analysis of Circular Data},
  publisher = {Cambridge University Press},
  author = {Fisher, N.I.}
}
@inproceedings{Knutsson1993,
  year = {1993},
  title = {Normalized Convolution - A Technique for Filtering Incomplete and Uncertain Data},
  booktitle = {SCIA'93, Proceedings of the 8th Scandinavian Conference on Image Analysis},
  pages = {997--1006},
  editor = {{H\o gda}, K. A. and Braathen, B. and Heia, K.},
  volume = {2},
  address = {{Troms\o} Norway},
  publisher = {Norwegian Society for Image Processing and Pattern Recognition},
  author = {Knutsson, H. and Westin, C.-F.}
}
@article{Eggers1998,
  number = {1},
  year = {1998},
  title = {Two fast Euclidean distance transformations in Z2 based on sufficient propagation},
  pages = {106-116},
  journal = {Comput. Vision Image Understanding},
  volume = {69},
  author = {Eggers, H.}
}
@inproceedings{Knutsson1991,
  month = {September},
  year = {1991},
  title = {A Tensor Based Approach to Structure Analysis and Enhancement in 2{D}, 3{D} and 4{D}},
  booktitle = {Workshop Program, Seventh Workshop on Multidimensional Signal Processing},
  address = {Lake Placid, New York, USA},
  publisher = {IEEE Signal Processing Society},
  author = {Knutsson, H. and Haglund, L. and {B\aa rman}, H.}
}
@article{Coster2001,
  year = {2001},
  title = {Image Analysis and Mathematical Morphology for Civil Engineering Materials},
  pages = {133--151},
  journal = {Cement {\&} Concrete Composites},
  volume = {23},
  author = {Coster, M. and Chermant, J.-L.}
}
@misc{Krivanek2002,
  year = {2002},
  title = {Autoadjusting charged-particle probe-forming apparatus},
  howpublished = {EP1197986},
  author = {Krivanek, O.L. and Dellby, N. and Lupini, A.R.}
}
@inproceedings{Granlund2000,
  month = {September 10--11},
  year = {2000},
  title = {An Associative Perception-Action Structure Using a Localized Space Variant Information Representation},
  booktitle = {Proceedings of Algebraic Frames for the Perception-Action Cycle (AFPAC)},
  address = {Kiel, Germany},
  author = {Granlund, G.H.}
}
@book{Papoulis2002,
  edition = {fourth},
  year = {2002, 1965},
  title = {Probability, Random Variables and Stochastic Processes},
  publisher = {McGraw-Hill},
  author = {Papoulis, A. and Pillai, S.U.}
}
@article{Brown1829,
  number = {34},
  year = {1829},
  title = {Additional Remarks on Active Molecules},
  pages = {161-166},
  journal = {The Philosophical Magazine and Annals of Philosophy},
  volume = {6},
  author = {Brown, R.}
}
@article{Unser1992,
  number = {1},
  month = {January},
  year = {1992},
  title = {Polynomial Spline Signal Approximations: Filter Design and Asymptotic Equivalence with Shannon's Sampling Theorem},
  pages = {95--103},
  journal = {IEEE Transactions on Information Theory},
  volume = {38},
  author = {Unser, Michael and Aldroubi, Akram and Eden, Murray}
}
@article{Worring1993,
  number = {3},
  year = {1993},
  title = {Digital curvature estimation},
  pages = {336--382},
  journal = {CVGIP: Image Understanding},
  volume = {58},
  author = {Worring, M. and Smeulders, A.W.M.}
}
@article{Medalia2002,
  year = {2002},
  title = {Macromolecular Architecture in Eukaryotic Cells Visualized by Cryoelectron Tomography},
  pages = {1209-1213},
  journal = {Ultramicroscopy},
  volume = {298},
  author = {Medalia, O. and Weber, I. and Frangakis, A.S. and Nicastro, D. and Gerisch, G. and Baumeister, W.}
}
@article{Wang1990,
  number = {1},
  year = {1990},
  title = {Electron-energy-loss and optical-transmittance investiationf of $Bi_2SR_2CaCu_2O_8$},
  pages = {420-425},
  journal = {Physical Review B},
  volume = {42},
  author = {Wang, Y.Y. and Feng, G. and Ritter, A.L.}
}
@misc{LeachXXXX,
  title = {Singular Value Decomposition -- A Primer},
  howpublished = {Web download-able. Department of Computer Science, Brown University, Providence, U.S.A.},
  author = {Leach, S.}
}
@article{Majumdar2000,
  number = {6},
  year = {2000},
  title = {Classification of Cereal Grains Using Machine Vision: {III}. Texture Models},
  pages = {1681--1687},
  journal = {Transactions of the American Society of Agricultural Engineers},
  volume = {43},
  author = {Majumdar, S. and Jayas, D.S.}
}
@techreport{Shewchuk1996,
  year = {1996},
  title = {Adaptive Precision Floating-Point Arithmetic and Fast Robust Geometric Predicates},
  institution = {School of Computer Science, Carnegie Mellon University, USA},
  author = {Shewchuk, J.R.}
}
@mastersthesis{Bezuijen2003,
  month = {September},
  year = {2003},
  title = {Improved sub-pixel shift estimation in 2D gray-value images},
  address = {Delft, The Netherlands},
  school = {Delft University of Technology},
  author = {Bezuijen, M.}
}
@article{Marr1980,
  year = {1980},
  title = {Theory of edge detection},
  pages = {187--217},
  journal = {Proceedings of the Royal Society of London B},
  volume = {207},
  author = {Marr, D. and Hildreth, E.}
}
@book{Marr1982,
  year = {1982},
  title = {Vision},
  address = {San Francisco, USA},
  publisher = {Freeman},
  author = {Marr, D.}
}
@article{Gerig1992,
  number = {2},
  month = {June},
  year = {1992},
  title = {Nonlinear anisotropic filtering of {MRI} data},
  pages = {221--232},
  journal = {IEEE Transactions on Medical Imaging},
  volume = {11},
  author = {Gerig, G. and {K\"ubler}, O. and Kikinis, R. and Jolesz, F.A.}
}
@article{Runnels1995,
  number = {4},
  year = {1995},
  title = {Theory and application of fluorescence homotransfer to melittin oligomerization},
  pages = {1569-1583},
  journal = {Biophysical Journal},
  volume = {69},
  author = {Runnels, L.W. and Scarlata, S.F.}
}
@article{Scharcanski1999,
  number = {11},
  month = {November},
  year = {1999},
  title = {Local Spatial Anisotropy and Its Variability},
  pages = {393--397},
  journal = {Journal of Pulp and Paper Science},
  volume = {25},
  author = {Scharcanski, J. and Dodson, C.T.J.}
}
@article{Pedersen2000,
  year = {2000},
  title = {The {Hausdorff} Dimension and Scale-Space Normalization of Natural Images},
  pages = {266--277},
  journal = {Journal of Visual Communication and Image Representation},
  volume = {11},
  author = {Pedersen, K.S. and Nielsen, M.}
}
@phdthesis{Fens2000,
  year = {2000},
  title = {Petrophysical Properties from Small Rock Samples using Image Analysis Techniques},
  school = {Delft University of Technology, Delft, The Netherlands},
  author = {Fens, T.W.}
}
@article{Keefe1992,
  year = {1992},
  title = {'Resolution' in high-resolution electron microscopy},
  pages = {282-297},
  journal = {Ultramicroscopy},
  volume = {47},
  author = {O'Keefe, M.A.}
}
@book{Hadwiger1957,
  year = {1957},
  title = {{V}orlesungen {\"uber} {I}nhalt, {Oberfl\"ache} und {I}soperimetrie},
  address = {Berlin},
  publisher = {Springer-Verlag},
  author = {Hadwiger, H.}
}
@book{Aguilera1999,
  edition = {second},
  year = {1999},
  title = {Microstructural Principles of Food Processing and Engineering},
  publisher = {Aspen Publishers, Inc.},
  author = {Aguilera, J.M. and Stanley, D.W.}
}
@article{Gramkov2001,
  year = {2001},
  title = {On Averaging Rotations},
  pages = {7--16},
  journal = {Journal of Mathematical Imaging and Vision},
  volume = {15},
  author = {Gramkov, C.}
}
@book{Bracewell2000,
  edition = {third},
  year = {2000,1965},
  title = {The {F}ourier Transform and its Applications},
  annote = {key_fft},
  publisher = {McGraw-Hill},
  author = {Bracewell, R.N.}
}
@article{Kimme1975,
  number = {2},
  month = {February},
  year = {1975},
  title = {Finding Circles by an Array of Accumulators},
  pages = {120--122},
  journal = {Communications of the ACM},
  volume = {18},
  author = {Kimme, C. and Ballard, D. and Sklansky, J.}
}
@article{Klar2001,
  number = {4},
  year = {2001},
  title = {Stimulated emission depletion microscopy with an offset depleting beam},
  pages = {393-395},
  journal = {Applied Physics Letters},
  volume = {78},
  author = {Klar, T. A. and Dyba, M. and Hell, S.W.}
}
@book{Madisetti1997,
  year = {1997},
  title = {The Digital Signal Processing Handbook},
  editor = {Madisetti, V.K. and Williams, D.B.},
  publisher = {IEEE Press/CRC Press}
}
@article{Granlund1978,
  year = {1978},
  title = {In Search of a General Picture Processing Operator},
  pages = {155--173},
  journal = {Computer Graphics and Image Processing},
  volume = {8},
  author = {Granlund, G.H.}
}
@book{Serra1982,
  year = {1982},
  title = {Image Analysis and Mathematical Morphology},
  address = {London},
  publisher = {Academic Press},
  author = {Serra, J.}
}
@book{Runge1924,
  year = {1924},
  title = {Vorlesungen {\"uber} Numerisches Rechnen},
  publisher = {Springer Verlag},
  author = {Runge, C. and Konitz, H.}
}
@article{Jeulin1992,
  number = {suppl. I},
  year = {1992},
  title = {Directional Mathematical Morphology for Oriented Image Restoration and Segmentation},
  pages = {545--550},
  journal = {Acta Stereology},
  volume = {11},
  author = {Jeulin, D. and Kurdy, M.B.}
}
@article{Jeulin1993,
  month = {October},
  year = {1993},
  title = {Random Models for Morphological Analysis of Powders},
  pages = {13--21},
  journal = {Journal of Microscopy},
  volume = {172, Pt 1},
  author = {Jeulin, D.}
}
@article{Westerweel1997,
  year = {1997},
  title = {Fundamentals of digital particle image velocimetry},
  pages = {1379-1392},
  journal = {Measurement Science and Technology},
  volume = {8},
  author = {Westerweel, J.}
}
@article{Vossepoel1979,
  year = {1979},
  title = {Dioda: Delineation and feature extraction of microscopical objects},
  pages = {231-244},
  journal = {Computer Programs in Biomedicine},
  volume = {10},
  author = {Vossepoel, A.M. and Smeulders, A.W.M and Broek, K. van den}
}
@inproceedings{Meyer1999a,
  series = {Lecture Notes on Computer Science},
  month = {September},
  year = {1999},
  title = {Morphological Scale-Space Representation with Levelings},
  booktitle = {Scale-Space Theories in Computer Vision (Second International Conference, Scale-Space'99, Corfu, Greece)},
  pages = {187--198},
  editor = {Nielsen, Mads and Johansen, Peter and Olsen, Ole F. and Weickert, Joachim},
  volume = {1682},
  address = {Berlin Heidelberg},
  publisher = {Springer-Verlag},
  author = {Meyer, Fernand and Maragos, Petros}
}
@article{Gerlich2001,
  year = {2001},
  title = {Four-dimensional imaging and quantitative reconstruction to analyse complex spatiotemporal processes in living cells},
  pages = {852-855},
  journal = {Nature Cell Biology},
  volume = {9},
  author = {Gerlich, D. and Beaudouin, J. and Gebhard, M. and Ellenberg, J. and Eils, R.}
}
@article{Sklansky1978,
  number = {10},
  month = {October},
  year = {1978},
  title = {On the {H}ough Technique for Curve Detection},
  pages = {923--926},
  journal = {IEEE Transactions on Computers},
  volume = {27},
  annote = {key_radon},
  author = {Sklansky, J.}
}
@article{Vliet1994a,
  number = {5},
  year = {1994},
  title = {Edge localization by MoG filters: Multiple-of-Gaussians},
  pages = {485--496},
  journal = {Pattern Recognition Letters},
  volume = {15},
  author = {Vliet, L.J. van and Verbeek, P.W.}
}
@book{doCarmo,
  year = {1976},
  title = {Differential Geometry of Curves and Surfaces},
  address = {New Jersey},
  publisher = {Prentice Hall},
  author = {do Carmo, M.P.}
}
@book{Dullien1979,
  edition = {second},
  year = {1979, 1992},
  title = {Porous Media - Fluid Transport and Pore Structure},
  publisher = {Academic Press},
  author = {Dullien, F.A.L.}
}
@article{Gerlich2003,
  year = {2003},
  title = {Quantitative motion analysis and visualization of cellular structures},
  pages = {3-13},
  journal = {Methods},
  volume = {29},
  author = {Gerlich, D. and Mattes, J. and Eils, R.}
}
@phdthesis{Eckley2001,
  month = {September},
  year = {2001},
  title = {Wavelet Methods for Time Series and Spatial Data},
  address = {Bristol, United Kingdom},
  school = {University of Bristol},
  author = {Eckley, I.A.}
}
@article{Verveer1999,
  number = {1},
  year = {1999},
  title = {A comparison of image restoration approaches applied to three-dimensional confocal and wide-field fluorescence microscopy},
  pages = {50-61},
  journal = {Journal of Microscopy},
  volume = {193},
  author = {Verveer, P.J. and Gemkow, M.J. and Jovin, T.M.}
}
@article{Verveer1998,
  number = {3},
  year = {1998},
  title = {Theory of confocal fluorescence imaging in the programmable array microscope (PAM)},
  pages = {192-198},
  journal = {Journal of Microscopy},
  volume = {198},
  author = {Verveer, P.J. and Hanley, Q.S. and Verbeek, P.W. and Vliet, L.J. van and Jovin, T.M.}
}
@misc{FastICA,
  year = {2004},
  title = {{FastICA}: An implementation of the fast fixed-point algorithm for independent component analysis in {MATLAB}, version 2.3},
  note = {Helsinki University of Technology, {\tt http://www.cis.hut.fi/projects/ica/fastica/}},
  author = {Hurri, J. and {G\"avert}, H. and {S\"arel\"a}, J. and {Hyv\"arinen}, A.}
}
@article{Lambacher1996,
  number = {3},
  year = {1996},
  title = {Fluorescence interference-contrast microscopy on oxidized silicon using a monomolecular dye layer},
  pages = {207--216},
  journal = {Applied Physics A},
  volume = {63},
  author = {Lambacher, A. and Fromherz, P.}
}
@phdthesis{Eijlers1993,
  year = {1993},
  title = {Scaling and Texture, Pyramids and Fractals},
  address = {Delft},
  school = {Information Theory Group, Department of Electrical Engineering, Delft University of Technology},
  author = {Eijlers, E.J.}
}
@article{Verveer1997,
  year = {1997},
  title = {Acceleration of the {ICTM} image restoration algorithm},
  pages = {191--195},
  journal = {Journal of Microscopy},
  volume = {188},
  author = {Verveer, P.J. and Jovin, T.M.}
}
@article{Weickert1999,
  year = {1999},
  title = {Coherence-enhancing diffusion of color images},
  pages = {201--212},
  journal = {Image and Vision Computing},
  volume = {17},
  author = {Weickert, J.}
}
@article{Young2003,
  number = {3},
  year = {2003},
  title = {Monitoring enzymatic reactions in nanolitre wells},
  pages = {254-263},
  journal = {Journal of Microscopy},
  volume = {212},
  author = {Young, I.T. and Moerman, R. and Doel, L.R. van den and Iordanov, V. and Kroon, A. and Dietrich, H.R.C. and Dedem, G.W.K. van and Bossche, A. and Gray, B.L. and Sarro, L. and Verbeek, P.W. and Vliet, L.J. van}
}
@article{Michielsen2001,
  year = {2001},
  title = {Integral-Geometry Morphological Image Analysis},
  pages = {461--538},
  journal = {Physics Report},
  volume = {347},
  author = {Michielsen, K. and Raedt, H. de}
}
@article{Young2002,
  number = {11},
  year = {2002},
  title = {Recursive Gabor filtering},
  pages = {2798--2805},
  journal = {IEEE Transactions on Signal Processing},
  volume = {50},
  author = {Young, I.T. and van Vliet, L.J. and van Ginkel, M. }
}
@inproceedings{Young2000,
  month = {September 3-7},
  year = {2000},
  title = {Recursive Gabor Filtering},
  booktitle = {ICPR15, Proc. 15th Int. Conference on Pattern Recognition (Barcelona, Spain)},
  pages = {342--345},
  editor = {Sanfeliu, A. and Villanueva, J.J. and Vanrell, M. and Alquezar, R. and Huang, T. and Serra, J.},
  volume = {3},
  publisher = {IEEE Computer Society Press, Los Alamitos},
  author = {Young, I.T. and Vliet, L.J. van and Ginkel, M. van}
}
@article{Kues2002,
  number = {4},
  year = {2002},
  title = {Single Molecule Motion Perpendicular to the Focal Plane of a Microscope: Application to Splicing Factor Dynamics within the Cell Nucleus},
  pages = {218-224},
  journal = {Single Molecule},
  volume = {3},
  author = {Kues, T. and Kubitscheck, U.}
}
@article{Buelow2001,
  number = {11},
  year = {2001},
  title = {Hypercomplex Signals - A Novel Extension of the Analytic Signal to the Multidimensional Case},
  pages = {2844--2852},
  journal = {IEEE Transactions on Signal Processing},
  volume = {49},
  author = {{B\"ulow}, T. and Sommer, G.}
}
@article{Grunewald2003,
  year = {2003},
  title = {Prospects of electron cryotomography to visualize macromolecular complexes inside cellular compartments: implications of crowding},
  pages = {577-591},
  journal = {Biophysical Chemistry},
  volume = {100},
  author = {{Gr\"unewald}, K. and Medalia, O. and Gross, A. and Steven, A.C. and Baumeister, W.}
}
@inproceedings{Haglund1993,
  month = {May},
  year = {1993},
  title = {Scale and Orientation Adaptive Filtering},
  booktitle = {Proceedings of the 8th Scandinavian Conference on Image Analysis},
  pages = {847--855},
  address = {{Troms\o}, Norway},
  author = {Haglund, L. and Knutsson, H. and Granlund, G.H.}
}
@phdthesis{Haglund1992,
  year = {1992},
  title = {Adaptive Multidimensional Filtering},
  address = {{Link\"oping, Sweden}},
  school = {{Link\"oping University}},
  author = {Haglund, L.}
}
@article{SaintMarc1991,
  number = {6},
  year = {1991},
  title = {Adaptive Smoothing: A General Tool for Early Vision},
  pages = {514},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {13},
  author = {Saint-Marc, P. and Chen, J.S. and Medioni, G.}
}
@article{Verwer1993,
  number = {5},
  year = {1993},
  title = {Binary and Grey-Value Skeletons: Metrics and Algorithms},
  pages = {1287--1308},
  journal = {Int. Journal of Pattern Recognition and Artificial Intelligence},
  volume = {7},
  author = {Verwer, B.J.H. and van Vliet, L.J. and Verbeek, P.W.}
}
@article{Verwer1991,
  month = {November},
  year = {1991},
  title = {Local distances for distance transformations in two and three dimensions},
  pages = {671--682},
  journal = {Pattern Recognition Letters},
  volume = {12},
  author = {Verwer, B.J.H.}
}
@inproceedings{Johansen1986,
  year = {1986},
  title = {Representing Signals by their Toppoints in Scale Space},
  booktitle = {Proceeding of the 8th International Conference on Pattern Recognition},
  pages = {215--217},
  volume = {1},
  author = {Johansen, P. and Skelboe, S. and Grue, K. and Andersen, J.D.}
}
@book{Jahne1997,
  edition = {4th},
  year = {1997},
  title = {Digital Image Processing},
  address = {Berlin},
  publisher = {Springer},
  author = {{J\"ahne}, B.}
}
@inproceedings{Vulovic2010a,
  month = {April 14-17},
  year = {2010},
  title = {Estimation Of Defocus And Astigmatism In Transmission Electron Microscopy},
  booktitle = {IEEE International Symposium on Biomedical Imaging},
  pages = {1121-1124},
  address = {Rotterdam, The Netherlands},
  author = {Vulovic, M. and Brandt, P.L. and Ravelli, R.B.G. and Koster, A.J. and Vliet, L.J. van and Rieger, B.}
}
@article{Verwer1994,
  number = {5},
  year = {1994},
  title = {Binary and grey-value skeletons: Metrics and algorithms},
  pages = {1287--1308},
  journal = {Int. Journal of Pattern Recognition and Artificial Intelligence},
  volume = {7},
  author = {Verwer, B.J.H. and Vliet, L.J. van and Verbeek, P.W.}
}
@article{Shao1998,
  number = {11},
  year = {1998},
  title = {On the fifth order aberration in a sextupole corrected probe forming system},
  pages = {2428-2437},
  journal = {Review of Scientific Instruments},
  volume = {59},
  author = {Shao, Z.}
}
@article{Nitzberg1992,
  number = {8},
  month = {August},
  year = {1992},
  title = {Nonlinear Image Filtering with Edge and Corner Enhancement},
  pages = {826--833},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {14},
  author = {Nitzberg, M. and Shiota, T.}
}
@article{Bernardini1994,
  number = {8},
  month = {August},
  year = {1994},
  title = {A New Technique for Twiddle-Factor Elimination in Multidimensional {FFT}'s},
  pages = {2176--2178},
  journal = {IEEE Transactions on Signal Processing},
  volume = {42},
  annote = {key_fft},
  author = {Bernardini, R. and Cortelazzo, G.M. and Mian, G.A.}
}
@article{Nellist1994,
  year = {1994},
  title = {Beyond the conventional information limit: the relevant coherence function},
  pages = {61-74},
  journal = {Ultramicroscopy},
  volume = {54},
  author = {Nellist, P.D. and Rodenburg, J.M.}
}
@article{Maragos1989,
  number = {7},
  year = {1989},
  title = {Pattern Spectrum and Multiscale Shape Representation},
  pages = {701--716},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {11},
  author = {Maragos, P.}
}
@article{DeMoment1989,
  number = {12},
  month = {December},
  year = {1989},
  title = {Image Reconstruction and Restoration: Overview of Common Estimation Structures and Problems},
  pages = {2024--2036},
  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
  volume = {37},
  author = {DeMoment, G.}
}
@article{Maragos1986,
  number = {5},
  year = {1986},
  title = {Morphological Skeleton Representation and Coding of Binary Images},
  pages = {1228-1244},
  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
  volume = {34},
  author = {Maragos, P. and Schafer, R. W.}
}
@article{GRADALT,
  year = {1986},
  title = {A Note on the Gradient of a Multi-Image},
  pages = {166--125},
  journal = {Computer Vision, Graphics, and Image Processing},
  volume = {33},
  author = {S. di Zeno}
}
@phdthesis{Ecker2004,
  month = {September},
  year = {2004},
  title = {Conformations of single polymer chains on surfaces},
  address = {Berlin},
  school = {Humboldt-Universit{\"a}t zu Berlin},
  author = {Ecker, C.}
}
@article{Haider2000,
  year = {2000},
  title = {Upper limits for the residual aberrations of a high-resolution aberration-corrected {STEM}},
  pages = {163-175},
  journal = {Ultramicroscopy},
  volume = {81},
  author = {Haider, M. and Uhlemann, S. and Zach, J.}
}
@article{Breen2000,
  year = {2000},
  title = {Mathematical Morphology: A Useful Set of Tools for Image Analysis},
  pages = {105--120},
  journal = {Statistics and Computing},
  volume = {10},
  author = {Breen, E.J. and Jones, R. and Talbot, H.}
}
@article{Mucke2004,
  number = {5},
  year = {2004},
  title = {Assessing the Flexibility of Intermediate Filaments by Atomic Force Microscopy},
  pages = {1241-1250},
  journal = {Journal of Molecular Biology},
  volume = {335},
  author = {{M\"ucke}, N. and Kreplak, L. and Krimse, R. and Wedig, T. and Herrmann, H. and Aebi, U. and Langowski, J.}
}
@article{Kusumi1993,
  year = {1993},
  title = {Confined Lateral Diffusion of Membrane Receptors as Studied by Single Particle Tracking (Nanovid Microscopy)},
  pages = {2021-2040},
  journal = {Biophysical Journal},
  volume = {65},
  author = {Kusumi, A. and Sako, Y. and Yamamoto, M.}
}
@article{Tarabusi1999,
  month = {February},
  year = {1999},
  title = {Characterization of the Range of the Radon Transform on Homogeneous Trees},
  pages = {11--17},
  journal = {Electronic Research Announcements of the American Mathematical Society},
  volume = {5},
  annote = {key_radon},
  author = {Tarabusi, E.C. and Cohen, J.M. and Colonna, F.}
}
@article{Dugelay1995,
  year = {1995},
  title = {Differential methods for the identification of 2D and 3D motion models in image sequences },
  pages = {105--127},
  journal = {Signal Processing: Image Communication},
  volume = {7},
  author = {Dugelay, J.L. and Sanson, H.}
}
@article{Gryczynski1995,
  number = {1},
  year = {1995},
  title = {Three-photon induced fluorescence of 2,5-diphenyloxazole with a femtosecond {Ti:sapphire} laser},
  pages = {30-35},
  journal = {Chemical Physics Letters},
  volume = {245},
  author = {Gryczynski, I. and Malak, H. and Lakowicz, J.R.}
}
@article{Fernandez2006a,
  number = {3},
  year = {2006},
  title = {Strategies for structural determination of biological specimens},
  pages = {84-94},
  journal = {IEEE Signal Processing Magazine},
  volume = {23},
  author = {Fernandez, J.-J. and Sorzano, C.O.S. and Marabini, R. and Carazo, J.-M.}
}
@article{Immerkaer1996,
  number = {2},
  year = {1996},
  title = {Fast Noise Variance Estimation},
  pages = {300-302},
  journal = {Computer Vision and Image Understanding},
  volume = {64},
  author = {{Immerk\aer}, J.}
}
@article{Bazin1965,
  month = {August},
  year = {1965},
  title = {Off-line Global Approach to Pattern Recognition for Bubble Chamber Pictures},
  pages = {291--295},
  journal = {IEEE Transactions on Nuclear Science},
  volume = {12},
  author = {Bazin, M.J. and Benoit, J.W.}
}
@article{Lenz1987a,
  year = {1987},
  title = {Rotation-Invariant Operators and Scale-Space Filtering},
  pages = {151--154},
  journal = {Pattern Recognition Letters},
  volume = {6},
  author = {Lenz, R.}
}
@article{Miller1953,
  year = {1953},
  title = {A Production of Amino Acids Under Possible Primitive Earth Conditions},
  pages = {528--529},
  journal = {Science},
  volume = {117},
  author = {Miller, S.L.}
}
@article{Thapa1997,
  number = {1},
  month = {January/February},
  year = {1997},
  title = {Semi-automatic Analysis of Rock Fracture Orientations From Borehole Wall Images},
  pages = {129--137},
  journal = {Geophysics},
  volume = {62},
  author = {Thapa, B.B. and Hughett, P. and Karasaki, K.}
}
@phdthesis{Xu1996,
  year = {1996},
  title = {Motion and Optical Flow in Computer Vision},
  address = {{Link\"oping}, Sweden},
  school = {{Link\"oping} University},
  author = {Xu, S.}
}
@misc{VedelJensen2000,
  month = {May 20--25},
  year = {2000},
  title = {Stereology and Geometric Tomography},
  howpublished = {Summer School, Sandbjerg Manor, Denmark},
  author = {Vedel Jensen, E.B.}
}
@article{Pauwels1995,
  number = {7},
  month = {July},
  year = {1995},
  title = {An Extended Class of Scale-Invariant and Recursive Scale Space Filters},
  pages = {691--701},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {17},
  author = {Pauwels, E.J. and Gool, L.J. van and Fiddelaers, P. and Moons, T.}
}
@inproceedings{Goldfarb1986,
  year = {1986},
  title = {Metric Data Models and Associative Memories},
  booktitle = {IASTED/AFCET International Symposium on Robotics and Artificial Intelligence, University Paul Sabatier, Toulouse},
  pages = {53--73},
  volume = {3},
  author = {Goldfarb, L.}
}
@article{Goldfarb1984,
  number = {5},
  year = {1984},
  title = {A Unified Approach to Pattern Recognition},
  pages = {575--582},
  journal = {Pattern Recognition},
  volume = {17},
  author = {Goldfarb, L.}
}
@article{Silcox1992,
  year = {1992},
  title = {Resolution limits in annular dark field {STEM}},
  pages = {173-186},
  journal = {Ultramicroscopy},
  volume = {47},
  author = {Silcox, J. and Xu, P. and Loane, R.F.}
}
@article{Blair1996,
  number = {B9},
  year = {1996},
  title = {Using Two-Point Correlation Functions to Characterize Microgeometry and Estimate Permeabilities of Sandstones and Porous Glass},
  pages = {20359--20375},
  journal = {Journal of Geophysical Research},
  volume = {101},
  author = {Blair, S.C. and Berge, P.A. and Berryman, J.G.}
}
@article{Rieger2001a,
  number = {7},
  year = {2002},
  title = {Curvature of n-dimensional Space Curves in Grey-Value Images},
  pages = {738--745},
  journal = {IEEE Transactions on Image Processing},
  volume = {11},
  author = {Rieger, B. and Vliet, L.J. van}
}
@article{Deegan1997,
  year = {1997},
  title = {Capillary flow as the cause of ring stains from dried liquid drops},
  pages = {827--829},
  journal = {Nature},
  volume = {389},
  author = {Deegan, R.D. and Bakajin, O. and Dupont, T.F. and Huber, G. and Nagel, S.R. and Witten, T.A.}
}
@article{Biemond1990,
  number = {5},
  month = {May},
  year = {1990},
  title = {Iterative Methods for Image Deblurring},
  pages = {856--883},
  journal = {Proceedings of the IEEE},
  volume = {78},
  author = {Biemond, J. and Lagendijk, R.L. and Mersereau, R.M.}
}
@article{Jones2005,
  number = {4},
  year = {2005},
  title = {Measuring Forces between Protein Fibers by Microscopy},
  pages = {2433-2441},
  journal = {Biophysical Journal},
  volume = {88},
  author = {Jones, C.W. and Wang, J.C. and Briehl, R.W. and Turner, M.S.}
}
@article{Jares-Erijman2003,
  number = {7},
  year = {2003},
  title = {{FRET} imaging},
  pages = {1138-1395},
  journal = {Nature Biotechnology},
  volume = {21},
  author = {Jares-Erijman, E.A. and Jovin, T.M.}
}
@article{Jares-Erijman2006,
  year = {2006},
  title = {Imaging molecular interactions in living cells by {FRET} microscopy},
  journal = {Current Opinion in Chemical Biology},
  author = {Jares-Erijman, E.A. and Jovin, T.M.}
}
@inproceedings{Sorensen1988,
  month = {April},
  year = {1988},
  title = {Efficient Computation of the Short-Time {FFT}},
  booktitle = {Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing, (New York, U.S.A.)},
  pages = {1894--1897},
  annote = {key_fft},
  author = {Sorensen, H.V. and Burrus, C.S.}
}
@article{Bonnet2000,
  year = {2000},
  title = {Artificial Intelligence and Pattern Recognition Techniques in Microscope Image Processing and Analysis},
  journal = {Advances in Imaging and Electron Physics},
  volume = {114},
  author = {Bonnet, {No\"el}}
}
@article{Sukanya2000,
  number = {3},
  month = {July},
  year = {2000},
  title = {Multiscale Image Analysis through the Surface-shape Operator},
  pages = {305--316},
  journal = {Journal of Electronic Imaging},
  volume = {9},
  author = {Sukanya, P. and Takamatsu, R. and Sato, M.}
}
@article{Sorensen1987,
  number = {6},
  month = {June},
  year = {1987},
  title = {Real-Valued Fast {Fourier} Transform Algorithms},
  pages = {849--863},
  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
  volume = {35},
  annote = {key_fft},
  author = {Sorensen, H.V. and Jones, D.L. and Heideman, M.T. and Burrus, C.S.}
}
@article{Moon1996,
  number = {6},
  month = {November},
  year = {1996},
  title = {The Expectation-Maximization Algorithm},
  pages = {47--60},
  journal = {IEEE Signal Processing Magazine},
  volume = {13},
  author = {Moon, T.K.}
}
@article{Noble1988,
  number = {2},
  month = {May},
  year = {1988},
  title = {Finding Corners},
  pages = {121--128},
  journal = {Image and Vision Computing},
  volume = {6},
  author = {Noble, A.}
}
@book{Barham2001,
  year = {2001},
  title = {The Science of Cooking},
  address = {Berlin, Heidelberg, New York},
  publisher = {Springer},
  author = {Barham, P.}
}
@article{Bleau1992,
  number = {2},
  month = {September},
  year = {1992},
  title = {A New Set of Fast Algorithms for Mathematical Morphology, I. Idempotent Geodesic Transforms},
  pages = {178--209},
  journal = {CVGIP: Image Understanding},
  volume = {56},
  author = {Bleau, A. and Guise, J. de and LeBlanc, A.-R.}
}
@article{Iverson1995,
  number = {10},
  month = {October},
  year = {1995},
  title = {Logical/Linear Operators for Image Curves},
  pages = {982--996},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {17},
  author = {Iverson, L.A. and Zucker, S.W.}
}
@inproceedings{Tretiak1984,
  year = {1984},
  title = {Velocity estimation for mimage sequences with second order differential operators},
  booktitle = {Int. Conf. on Pattern Recognition (Montreal, Canada)},
  pages = {20--22},
  publisher = {IEEE Computer Society Press, Los Alamitos, USA},
  author = {Tretiak, O. and Pastor, L.}
}
@book{Dudgeon1984,
  year = {1984},
  title = {Multidimensional Digital Signal Processing},
  publisher = {Prentice-Hall},
  author = {Dudgeon, D.E. and Merserau, R.M.}
}
@phdthesis{Iverson1994,
  year = {1994},
  title = {Toward Discrete Geometric Models for Early Vision},
  address = {{Montr\'eal}, Canada},
  school = {McGill University},
  author = {Iverson, L.A.}
}
@article{Potter2004,
  year = {2004},
  title = {Robotic grid loading system for a transmission electron microscope},
  pages = {431-440},
  journal = {Journal of Structural Biology},
  volume = {146},
  author = {Potter, C.S. and Pulokas, J. and Smith, P. and Suloway, C. and Carragher, B.}
}
@book{Kohonen1995,
  series = {Springer Series in Information Sciences},
  year = {1995},
  title = {Self-Organizing Maps},
  volume = {30},
  publisher = {Springer-Verlag},
  author = {Kohonen, T.}
}
@article{Qian1999,
  year = {1999},
  title = {Quantitative Study of Polymer Conformation and Dynamics by Single-Particle Tracking},
  pages = {1598-1805},
  journal = {Biophysical Journal},
  volume = {78},
  author = {Qian, H. and Elson, E.L.}
}
@article{Bennett1999,
  number = {7},
  month = {July},
  year = {1999},
  title = {A Method to Detect and Characterize Ellipses using the Hough Transform},
  pages = {652--657},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {21},
  annote = {key_radon},
  author = {Bennett, N. and Burridge, R. and Saito, N.}
}
@inproceedings{Faas2003,
  series = {LNCS 2749},
  month = {June 29 -July 2},
  year = {2003},
  title = {3D-Orientation space; filters and sampling},
  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden)},
  pages = {36-42},
  address = {Berlin},
  publisher = {Springer-Verlag},
  author = {Faas, F.G.A. and Vliet, L.J. van}
}
@article{Qian1991,
  year = {1991},
  title = {Single Particle Tracking; Analysis of diffusion flow in two-dimensional systems},
  pages = {910-921},
  journal = {Biophysical Journal},
  volume = {60},
  author = {Qian, H. and Sheetz, M.P. and Elson, E.L.}
}
@article{Mallat1992a,
  number = {2},
  month = {March},
  year = {1992},
  title = {Singularity Detection and Processing with Wavelets},
  pages = {617--643},
  journal = {IEEE Transactions on Information Theory},
  volume = {38},
  author = {Mallat, S.G. and Hwang, W.L.}
}
@article{Qian1994,
  number = {10},
  month = {October},
  year = {1994},
  title = {Self-Sorting In-Place {FFT} Algorithm with Minimum Working Space},
  pages = {2835--2836},
  journal = {IEEE Transactions on Signal Processing},
  volume = {42},
  annote = {key_fft},
  author = {Qian, Z. and Lu, C. and An, M. and Tolimieri, R.}
}
@inproceedings{Williams1998,
  series = {Proceedings of SPIE},
  year = {1998},
  title = {Back-Illuminated {CCD} Imagers for High Information Content Digital Photography},
  author = {Williams, G.M. Jr and Marsh, H.H. and Hinds, M.}
}
@article{Ragnemalm1992,
  number = {3},
  month = {November},
  year = {1992},
  title = {Neighborhoods for Distance Transformation Using Ordered Propagation},
  pages = {399--409},
  journal = {CVGIP: Image Understanding},
  volume = {56},
  author = {Ragnemalm, I.R.}
}
@techreport{Andersson1999,
  year = {1999},
  title = {Filter Networks},
  institution = {{Link\"oping} University},
  author = {Andersson, M. and Wiklund, J. and Knutsson, H.}
}
@techreport{Andersson1998,
  year = {1998},
  title = {Sequential Filter Trees for Efficient 2{D}, 3{D} and 4{D} Orientation Estimation},
  institution = {{Link\"oping} University},
  author = {Andersson, M. and Wiklund, J. and Knutsson, H.}
}
@article{Duits2004,
  number = {3},
  year = {2004},
  title = {On the Axioms of Scale Space Theory},
  pages = {267-298},
  journal = {Journal of Mathematical Imaging and Vision},
  volume = {20},
  author = {Duits, R. and Florak, L.M.J. and Graaf, J. de and Haar Romey, B.M. ter}
}
@article{Louverdis2002,
  year = {2002},
  title = {A New Approach to Morphological Color Image Processing},
  pages = {1733-1741},
  journal = {Pattern Recognition},
  volume = {35},
  author = {Louverdis, G. and Vardavoulia, M.I. and Andreadis, I. and Tsalides, Ph.}
}
@article{Grunewald2003a,
  year = {2003},
  title = {Three-Dimensional Structure of Herpes Simplex Virus from Cryo-Electron Tomography},
  pages = {1396-1398},
  journal = {Science},
  volume = {302},
  author = {{Gr\"unewald}, K. and Desai, P. and Winkler, D.C. and Heymann, J.B. and Belnap, D. and Baumeister, W. and Steven, A.C.}
}
@article{Jamitzky2001,
  number = {1-2},
  year = {2001},
  title = {Scaling-index method as an image processing tool in scanning-probe microscopy},
  pages = {241-246},
  journal = {Ultramicroscopy},
  volume = {86},
  author = {Jamitzky, F. and Stark, R.W. and Bunk, W. and Thalhammer, S. and {R\"ath}, C. and Aschenbrenner, T. and Morfill, G.E. and Heckl, W.M.}
}
@phdthesis{Andersson1992,
  year = {1992},
  title = {Controllable Multidimensional Filters and Models in Low Level Computer Vision},
  address = {{Link\"oping, Sweden}},
  school = {{Link\"oping University}},
  author = {Andersson, M.T.}
}
@inproceedings{Ye1997,
  month = {June 15-19},
  year = {1997},
  title = {Automatic High Resolution Sedimentary Dip Detection on Borehole Imagery},
  booktitle = {SPWLA 38th Annual Logging Symposium},
  author = {Ye, S. and Rabiller, P. and Keskes, N.}
}
@article{Shannon1949,
  number = {1},
  year = {1949},
  title = {Communication in the Presence of Noise},
  pages = {10--21},
  note = {[reprinted in: Proceedings of the IEEE, vol. 86, no. 2, pp. 447-457, February 1998]},
  journal = {Proceedings of the IRE},
  volume = {37},
  author = {Shannon, C.E.}
}
@article{Peters2003,
  year = {2001},
  title = {Trafficking of prion proteins through a novel caveolae-mediated endosomal pathway},
  pages = {703-717},
  journal = {Journal of Cell Biology},
  volume = {162},
  author = {Peters, P.J. and Vey, M. and Donselaar, E. van and Mironov, A. Jr. and Erpel, S. and Peretx, D. and Lexlerc, E. and DeArmond, S.J. and Burton, D.R. and Williamson, R.A. and Prusiner, S.B.}
}
@article{Shannon1948,
  month = {July, October},
  year = {1948},
  title = {A Mathematical Theory of Communication},
  pages = {379--423, 623--656},
  journal = {The Bell System Technical Journal},
  volume = {27},
  author = {Shannon, C.E.}
}
@article{Robinson2004,
  number = {15},
  year = {2004},
  title = {Efficient morphological reconstruction: a downhill filter},
  pages = {1759-1767},
  journal = {Pattern Recognition Letters},
  volume = {25},
  author = {Robinson, K. and Whelan, P.F.}
}
@article{Cherny1999,
  number = {4},
  year = {1999},
  title = {{DNA} Bending Due to Specific p53 and p53 Core Domain-{DNA} Interactions Visualized by Electron Microscopy},
  pages = {1015-1026},
  journal = {Journal of Molecular Biology},
  volume = {294},
  author = {Cherny, D.I. and Striker, G. and Subramaniam, V. and Jett, S.D. and Pale\v{c}ek, E. and Jovin, T.M.}
}
@inproceedings{Rieger2001,
  month = {May 30 -June 1},
  year = {2001},
  title = {Estimation of Curvature of n-dimensional Space Curves in Grey-value Images},
  booktitle = {Proc. ASCI 2001, 7th Annual Conf. of the Advanced School for Computing and Imaging},
  pages = {436--442},
  editor = {Lagendijk, R. and Pimentel, A. and Wilkinson, M.},
  address = {Delft},
  author = {Rieger, B. and Vliet, L.J. van},
  organization = {ASCI}
}
@inproceedings{Rieger2003,
  series = {LNCS 2749},
  month = {June 29 -July 2},
  year = {2003},
  title = {Estimation of curvature based shape properties of surfaces in 3D grey-value images},
  booktitle = {SCIA'03, Proceedings of the 13th Scandinavian Conference on Image Analysis ({G\"oteborg}, Sweden) },
  pages = {262-267},
  editor = {{Big\"un}, J. and Gustavsson, T.},
  address = {Berlin},
  publisher = {Springer-Verlag},
  author = {Rieger, B. and Vliet, L.J. van and Verbeek, P.W.}
}
@article{Borgefors1986,
  year = {1986},
  title = {Distance transformations in digital images},
  pages = {344--371},
  journal = {Computer Vision, Graphics and Image Processing },
  volume = {34},
  author = {Borgefors, G.}
}
@article{Wiener1949,
  year = {1949},
  title = {Extrapolation, Interpolation and Smoothing of stationary Time Series},
  journal = {Cambridge, MA : M.I.T. Press},
  author = {Wiener, N.}
}
@article{Borgefors1984,
  year = {1984},
  title = {Distance transformations in arbitrary dimensions},
  pages = {321-345},
  journal = {Computer Vision, Graphics and Image Processing },
  volume = {27},
  author = {Borgefors, G.}
}
@article{Dougherty2001,
  year = {2001},
  title = {Optimal Conjunctive Granulometric Bandpass Filters},
  pages = {39--51},
  journal = {Journal of Mathematical Imaging and Vision},
  volume = {14},
  author = {Dougherty, Edward R.}
}
@article{Pei2001,
  number = {11},
  year = {2001},
  title = {Efficient Implementation of Quaternion Fourier Transform, Convolution, and Correlation by 2D Complex FFT},
  pages = {2783--2797},
  journal = {IEEE Transactions on Signal Processing},
  volume = {49},
  annote = {key_fft},
  author = {Pei, S.-C. and Ding, J.-J. and Chang, J.-H.}
}
@book{Scheck1999,
  year = {1999},
  title = {Mechanics: From {N}ewton's Law to Deterministic Chaos},
  address = {Berlin},
  publisher = {Springer},
  author = {F. Scheck}
}
@article{Gordon2004,
  number = {17},
  year = {2004},
  title = {Single-molecule high-resolution imaging with photobleaching},
  pages = {6462-6465},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  volume = {101},
  author = {Gordon, M.P. and Ha, T. and Selvin, P.R.}
}
@inproceedings{Koenderink2002,
  series = {Lecture Notes in Computer Science},
  year = {2002},
  title = {Image Processing Done Right},
  booktitle = {Proceedings of the ECCV 2002},
  pages = {158--172},
  editor = {Heyden, A.},
  volume = {2350},
  publisher = {Springer-Verlag},
  author = {Koenderink, J.J. and Doorn, A.J. van}
}
@article{Huang1979,
  number = {1},
  month = {February},
  year = {1979},
  title = {A Fast Two-Dimensional Median Filtering Algorithm},
  pages = {13--18},
  journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
  volume = {27},
  author = {Huang, T.S. and Yang, G.J. and Tang, G.Y.}
}
@misc{LevitzXXXX,
  title = {Evaluation of 3D Structural Properties of Porous Materials from 2D Sections: Morphology and Chord Length Distribution Functions},
  howpublished = {www},
  author = {Levitz, P.}
}
@inproceedings{Vliet1988a,
  year = {1988},
  title = {An edge detection model based on nonlinear Laplace filtering},
  booktitle = {Pattern Recognition and Artificial Intelligence},
  pages = {63--73},
  editor = {Gelsema, E.S. and Kanal L.N.},
  address = {North-Holland},
  publisher = {Elsevier Science Publishers B.V.},
  author = {Vliet, L.J. van and Young, I.T. and Beckers, A.L.D.}
}
@article{Hansen2001,
  year = {2001},
  title = {Nonparametric Estimation of the Chord Length Distribution},
  journal = {Advances in Applied Probability},
  volume = {33},
  author = {Hansen, M.B. and Zwet, E.W. van}
}
@article{Baddeley1997,
  year = {1997},
  title = {Kaplan-Meier Estimators for Interpoint Distance Distributions for Spatial Point Processes},
  pages = {263--292},
  journal = {Annals of Statistics 25},
  volume = {25},
  author = {Baddeley, A.J. and Gill, R.D.}
}
@inproceedings{Vliet1995a,
  month = {June},
  year = {1995},
  title = {Estimators for Orientation and Anisotropy in Digitized Images},
  booktitle = {ASCI'95, Proceedings of the First Annual Conference of the Advanced School for Computing and Imaging},
  pages = {442--450},
  editor = {van Katwijk, J. and Gerbrands, J.J. and van Steen, M.R. and Tonino, J.F.M.},
  address = {Heijen, The Netherlands},
  author = {Vliet, L.J. van and Verbeek, P.W.}
}
@article{Maintz1998,
  number = {1},
  year = {1998},
  title = {A survey of medical image registration},
  pages = {1-37},
  journal = {Medical Image Analysis},
  volume = {1},
  author = {Maintz, J.B.A. and Viergever, M.A.}
}
@book{Barrett1981,
  year = {1981},
  title = {Radiological Imaging; The Theory of Image Formation, Detection, and Processing},
  annote = {key_radon},
  publisher = {Academic Press},
  author = {Barrett, H.H. and Swindell, W.}
}
@book{Honerkamp1998,
  year = {1998},
  title = {Statistical Physics: An Advanced Approach with Applications},
  publisher = {Springer-Verlag},
  author = {Honerkamp, J.}
}
@article{Maintz1996,
  number = {4},
  year = {1996},
  title = {Evaluation of ridge seeking operators for multimodality medical image matching},
  pages = {353--365},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {18},
  author = {Maintz, J.B.A. and Elsen, P.A. van den and Viergever, M.A.}
}
@book{Hyvarinen2001,
  year = {2001},
  title = {Independant Component Analysis},
  address = {New York},
  publisher = {Wiley Interscience},
  author = {{Hyv\"arinen}, A. and Karhumen, J. and Oja, E.}
}
@techreport{Almansa1998,
  year = {1998},
  title = {Fingerprint Enhancement by Shape Adaptation of Scale-Space Operators with Automatic Scale Selection},
  annote = {Partial document},
  institution = {University of the Republic of Uruguay},
  author = {Almansa, A. and Lindeberg, T.}
}
@article{Hofmann1984,
  number = {3},
  year = {1984},
  title = {Localization of flexible sites in thread-like molecules from electron micrographs. Comparison of interstitial, basement membrane and intima collagens},
  pages = {325-343},
  journal = {Journal of Molecular Biology},
  volume = {172},
  author = {Hofmann, H. and Voss, T. and {K\"uhn}, K. and Engel, J.}
}
@inproceedings{Aguado1996,
  month = {16--19 September},
  year = {1996},
  title = {Improving Parameter Space Decomposition for the Generalised {Hough} Transform},
  booktitle = {International Conference on Image Processing},
  pages = {627--630},
  volume = {3},
  author = {Aguado, A.S. and Montiel, M.E. and Nixon, M.S.}
}
@article{Roberts2001,
  number = {2},
  month = {February},
  year = {2001},
  title = {Curvature attributes and their application to 3D interpreted horizons},
  pages = {85-100},
  journal = {First Break},
  volume = {19},
  author = {Roberts, A.}
}
@inproceedings{Vliet1993akort,
  year = {1993},
  title = {Curvature and Bending Energy in Digitized 2D and 3D Images },
  booktitle = {SCIA'93},
  pages = {1403--1410 },
  address = {{Troms\o }, Norway},
  author = {Vliet, L.J. van and Verbeek, P.W. }
}
@article{Koenderink1992b,
  number = {4},
  year = {1992},
  title = {Second-order optic flow},
  pages = {530-538},
  journal = {Journal of the Optical Society of America A},
  volume = {9},
  author = {Koenderink, J.J. and Doorn, A.J. van}
}
@book{Lakowicz1999,
  edition = {2nd},
  year = {1999},
  title = {Principles of Fluorescence Spectroscopy},
  address = {New York},
  publisher = {Kluwer Academic Press},
  author = {Lakowicz, J.R.}
}
@article{Cardoso1998,
  number = {10},
  year = {1998},
  title = {Blind signal separation: statistical principles},
  pages = {2009-2025},
  journal = {Proceedings of the IEEE},
  volume = {86},
  author = {Cardoso, J.-F.}
}
@article{Koenderink1992a,
  number = {8},
  year = {1992},
  title = {Surface shape and curvature scales},
  pages = {557--565},
  journal = {Image and Vision Computing},
  volume = {10},
  author = {Koenderink, J.J. and Doorn, A.J. van}
}
@article{Kornprobst1999,
  year = {1999},
  title = {Image Sequence Analysis via Partial Differential Equations},
  pages = {5--26},
  journal = {Journal of Mathematical Imaging and Vision},
  volume = {11},
  author = {Kornprobst, P. and Sand, S. and Deriche, R. and Aubert, G.}
}
@article{Shevelev1998,
  year = {1998},
  title = {Second-order features extraction in the cat visual cortex: selective and invariant sensitivity of neurons to the shape and orientation of crosses and corners},
  pages = {195-204},
  journal = {BioSystems},
  volume = {48},
  author = {Shevelev, I.A.}
}
@article{Bacia2003,
  number = {1},
  year = {2003},
  title = {A dynamic view of cellular processes by in vivo fluorescence auto- and cross-correlation spectroscopy},
  pages = {74-85},
  journal = {Methods},
  volume = {29},
  author = {Bacia, K. and Schwille, P.}
}
@article{Yuille1986,
  number = {1},
  month = {January},
  year = {1986},
  title = {Scaling theorems for zero crossings},
  pages = {15--25},
  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
  volume = {8},
  author = {Yuille, A.L. and Poggio, T.}
}
@article{Volkmer2000,
  number = {3},
  year = {2000},
  title = {One- and two-photon excited fluorescence lifetimes and anisotropy decays of green fluorescent proteins},
  pages = {1589-1598},
  journal = {Biophysical Journal},
  volume = {78},
  author = {Volkmer, A. and Subramaniam, V. and Birch, D.J. and Jovin, T.M.}
}
@article{Bigelow2003,
  number = {9},
  month = {May},
  year = {2003},
  title = {Confocal fluorescence spectroscopy and anisotropy imaging system},
  pages = {695-697},
  journal = {Optics Letters},
  volume = {28},
  author = {Bigelow, C.E. and Conover, D.L. and Foster, T.H.}
}
@inproceedings{Coeurjolly2001,
  series = {Lecture Notes on Computer Science},
  month = {May},
  year = {2001},
  title = {Discrete Curvature Based on Osculating Circle Estimation},
  booktitle = {Visual Form 2001},
  pages = {303--312},
  editor = {Arcelli, C. and Cordella, L.P. and Sanniti di Baja, G. },
  volume = {2059},
  address = {Capri, Italy},
  publisher = {Springer-Verlag},
  author = {Coeurjolly, D. and Miguet, S. and Tougne, L.}
}
@book{Kak1988,
  year = {1988},
  title = {Principles of Computerized Tomographic Imaging},
  publisher = {IEEE Press},
  author = {Kak, A. C. and Slaney, M.}
}
@inproceedings{Cao1999,
  series = {Lecture Notes on Computer Science},
  month = {September},
  year = {1999},
  title = {Morphological Scale Space and Mathematical Morphology},
  booktitle = {Scale-Space Theories in Computer Vision (Second International Conference, Scale-Space'99, Corfu, Greece)},
  pages = {164--174},
  editor = {Nielsen, Mads and Johansen, Peter and Olsen, Ole F. and Weickert, Joachim},
  volume = {1682},
  address = {Berlin Heidelberg},
  publisher = {Springer-Verlag},
  author = {Cao, {Fr\'ed\'eric}}
}
@book{Leibovic1990,
  year = {1990},
  title = {Science of Vision},
  publisher = {Springer-Verlag},
  author = {Leibovic (ed), K.N.}
}
@inbook{Hediger2004,
  series = {Methods in Enzymology},
  year = {2004},
  title = {Methods for Visualizing Chromatin Dynamics in Living Yeast},
  volume = {375},
  chapter = {22},
  publisher = {Elsevier Academic Press},
  author = {Hediger, F. and Taddei, A. and Neumann, F.R. and Gasser, S.M.}
}
@article{Axelrod2001,
  year = {2001},
  title = {Total Internal Reflection Fluorescence Microscopy in Cell Biology},
  pages = {764-774},
  journal = {Traffic},
  volume = {2},
  author = {Axelrod, D.}
}
@article{Kuwahara1980,
  year = {1980},
  title = {Image enhancement and left ventricular contour extraction techniques applied to radioisotope angiocardiograms},
  pages = {107-119},
  journal = {Audiomedica},
  volume = {3},
  author = {Kuwahara, M. and Hachimura, K. and Kinoshita, M.}
}
@inproceedings{Whitworth1999,
  year = {1999},
  title = {The imaging and measurement of bubbles in bread doughs},
  booktitle = {Bubbles In Food},
  pages = {221-231},
  editor = {Campbell, G.M. and Webb, C. and Pandiella, S.S.},
  address = {St. Paul, USA},
  publisher = {Eagan Press},
  author = {Whitworth, M.B. and Alava, J.M.}
}
@article{Daugman1988,
  number = {7},
  year = {1988},
  title = {Pattern and motion vision without Laplacian zero-crossings},
  pages = {1142--1148},
  journal = {Journal of the Optical Society of America A},
  volume = {5},
  author = {Daugman, J.G.}
}
@book{Rutishauer1990,
  year = {1990},
  title = {Lectures on numerical mathematics},
  publisher = {{Birkh\"auser}},
  author = {Rutishauer, H.}
}
@article{Nagel1983,
  year = {1983},
  title = {Displacement vectors derived from second-order intensity variations in image sequences},
  pages = {85-117},
  journal = {Computer Graphics and Image Processing},
  volume = {21},
  author = {Nagel, H.H.}
}
@misc{BaddeleyXXXX,
  title = {Spatial Sampling and Censoring},
  howpublished = {Some chapter. From www},
  author = {Baddeley, A.}
}
@article{Nagel1986,
  year = {1986},
  title = {An investigation of smoothness constraints for the estimation of displacement vector fields form image sequences},
  pages = {168-176},
  journal = {IEEE Transactions of Pattern Recognition and Machine Intelligence},
  volume = {8},
  author = {Nagel, H.H. and Enkelmann, W.}
}
@article{Daugman1985,
  number = {7},
  month = {July},
  year = {1985},
  title = {Uncertainty Relation for Resolution in Space, Spatial Frequency, and Orientation Optimized by Two-dimensional Visual Cortical Filters},
  pages = {1160--1169},
  journal = {Journal of the Optical Society of America A},
  volume = {2},
  author = {Daugman, J.G.}
}
@article{Sorzano2004,
  year = {2004},
  title = {{XMIPP:} a new generation of an open-source image processing package for electron microscopy},
  pages = {194-204},
  journal = {Journal of Structural Biology},
  volume = {148},
  author = {Sorzano, C.O.S. and Marabini, R. and Vel\'azquez-Muriel, J. and Bilbao-Castro, J.R. and Scherees, S.H.W. and Carazo, J.M. and Pascual-Montano, A.}
}
@article{Sorzano2001,
  year = {2001},
  title = {The Effect of Overabundant Projection Directions on {3D} Reconstruction Algorithms},
  pages = {108-118},
  journal = {Journal of Structural Biology},
  volume = {133},
  author = {Sorzano, C.O.S. and Marabini, R. and Boisset, N. and Rietzel, E. and {Schr\"oder}, R. and Herman, G.T. and Carazo, J.M.}
}
@inproceedings{Kerbyson1995,
  month = {4--6 July},
  year = {1995},
  title = {Circle Detection using {Hough} Transform Filters},
  booktitle = {Image Processing and Its Applications},
  pages = {370--374},
  author = {Kerbyson, D.J. and Atherton, T.J.}
}
@article{Meyer2004,
  year = {2004},
  title = {A new method for the determination of the wave aberration function for high-resolution {TEM}. {2. Measurement} of the antisymmetric aberrations},
  pages = {115-123},
  journal = {Ultramicroscopy},
  volume = {99},
  author = {Meyer, R.R. and Kirkland, A.I. and Saxton, W.O.}
}
@article{Lin1999,
  year = {1999},
  title = {The Refined Crystal Structure of Cowpea Mosaic Virus at 2.8 Resolution},
  pages = {20-34},
  journal = {Virology},
  volume = {265},
  author = {Lin, T. and Chen, Z. and Usha, R. and Stauffacher, C.V. and Dai, J.-B. and Schmidt, T. and Johnson, J.E.}
}
@book{Mitra2000,
  year = {2000},
  title = {Nonlinear Image Processing},
  publisher = {Academic Press},
  author = {Mitra (Ed), S. and Sicuranza (Ed), G.}
}
@book{HandbookCP1980,
  edition = {60th},
  year = {1980},
  title = {Handbook of Chemistry and Physics},
  editor = {Lide, D.R.},
  publisher = {CRC Press}
}
@article{Olsen1994,
  number = {8},
  month = {August},
  year = {1994},
  title = {Wavelet Localization of the {R}adon Transform},
  pages = {2055--2067},
  journal = {IEEE Transactions on Signal Processing},
  volume = {42},
  author = {Olsen, T. and DeStefano, J.}
}
@inproceedings{Wijk2004,
  year = {2004},
  title = {On Normalized Convolution to Measure Curvature Features for Automatic Polyp Detection},
  booktitle = {LNCS 3216, MICCAI'04},
  pages = {200-208},
  editor = {Barillot, C. and Haynor, D.R. and Hellier, P.},
  author = {Wijk, C. van and Truyen, R. and Gelder, R.E. van and Vliet, L.J. van and Vos, F.M.}
}
@article{Aitken1995,
  number = {4},
  year = {1995},
  title = {A Comparison of Rotational Representation in Structure and Motion Estimation for Maneuvering Objects},
  pages = {516--520},
  journal = {IEEE Transactions on Image Processing},
  volume = {4},
  author = {Aitken, V.C. and Schwartz, H.M.}
}
@article{Barber1996,
  number = {4},
  month = {December},
  year = {1996},
  title = {The Quickhull Algorithm for Convex Hulls},
  pages = {469--483},
  journal = {ACM Transactions on Mathematical Software},
  volume = {22},
  author = {Barber, C.B. and Dobkin, D.P. and Huhdanpaa, H.}
}
@book{Wilson1984a,
  year = {1984},
  title = {Theory and Practice of Scanning Optical Microscopy},
  address = {London,New York},
  annote = {ph2341},
  publisher = {Academic Press},
  author = {Wilson, T. and Sheppard, C.J.R.}
}
@misc{Zach2001,
  year = {2001},
  title = {Method for detecting geometrical-optical aberrations},
  howpublished = {WO 01.56057},
  author = {Zach, J.}
}
@article{Lee2001,
  number = {16},
  month = {July},
  year = {2001},
  title = {Neural Synergy in Visual Grouping: When Good Continuation Meets Common Fate},
  pages = {2057--2064},
  journal = {Vision Research},
  volume = {41},
  author = {Lee, S.-H. and Blake, R.}
}
@article{Lichte1996,
  year = {1996},
  title = {Electron holography: optimum position of the biprism in the electron microscope},
  pages = {89-109},
  journal = {Ultramicroscopy},
  volume = {64},
  author = {Lichte, H.}
}
@article{Lee2005,
  number = {4},
  year = {2005},
  title = {Accurate {FRET} Measurements within Single Diffusing Biomolecules Using Alternating-Laser Excitation},
  pages = {2939-2953},
  journal = {Biophysical Journal},
  volume = {88},
  author = {Lee, N.K. and Kapanidis, A.N. and Wang, Y. and Michalet, X. and Mukhopadhyay, J. and Ebright, R.H. and Weiss, S.}
}
@misc{Verbeek1999,
  year = {1999},
  note = {The GST as a projection operator},
  howpublished = {private communications},
  author = {Verbeek, P.W.}
}
@article{Cuisenaire1999,
  number = {2},
  year = {1999},
  title = {Fast Euclidean distance transformation by propagation using multiple neighborhoods},
  pages = {163-172},
  journal = { Computer Vision and Image Understanding},
  volume = {76},
  author = {Cuisenaire, O. and Macq, B.}
}
@inproceedings{Verbeek1995,
  month = {June 6-9},
  year = {1995},
  title = {Approximate Analytic Paraboloid Dilation},
  booktitle = {9th Scandinavian Conference on Image Analysis (Uppsala, Sweden)},
  pages = {95--102},
  editor = {Borgefors, G.},
  volume = {1},
  author = {Verbeek, P.W. and Vliet, L.J. van}
}
@inproceedings{Verbeek1998,
  month = {17-20 August},
  year = {1998},
  title = {Improved Curvature and Anisotropy Estimation for Curved Line Bundles},
  booktitle = {ICPR'98, Proc. 14th Int. Conference on Pattern Recognition},
  pages = {528--533},
  editor = {Jain, A.K. and Venkatesh, S. and Lovell, B.C.},
  publisher = {IEEE Computer Society Press, Los Alamitos},
  author = {Verbeek, P.W. and van Vliet, L.J. and van de Weijer, J.}
}
@article{Verbeek1990,
  year = {1990},
  title = {Shading from shape, the eikonal equation solved by grey-weighted distance transform},
  pages = {681--690},
  journal = {Pattern Recognition Letters},
  volume = {11},
  author = {Verbeek, P.W. and Verwer, B.J.H}
}
@misc{Verbeek1996,
  year = {1996},
  title = {Angular Deconvolution},
  howpublished = {Internal Communication},
  author = {Verbeek, P.W.}
}
@article{Verbeek1994,
  number = {7},
  year = {1994},
  title = {On the location error of curved edges in low-pass filtered {2-D} and {3-D} images},
  pages = {726--733},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {16},
  author = {Verbeek, P.W. and Vliet, L.J. van}
}
@article{Verbeek1993,
  number = {1},
  year = {1993},
  title = {Estimators of {2D} edge length and position, {3D} surface area and position in sampled grey-valued images},
  pages = {46--61},
  journal = {BioImaging},
  volume = {1},
  author = {Verbeek, P.W. and Vliet, L.J. van}
}
@inproceedings{Verbeek1992,
  month = {August 30-September 3},
  year = {1992},
  title = {Line and Edge Detection by Symmetry Filters},
  booktitle = {Proc. 11th IAPR Int. Conf. on Pattern Recognition (ICPR11, The Hague, The Netherlands)},
  pages = {749--753},
  volume = {III},
  publisher = {IEEE Computer Society Press, Los Alamitos, USA},
  author = {Verbeek, P.W. and Vliet, L.J. van}
}
@article{Griffith1973,
  number = {4},
  month = {April},
  year = {1973},
  title = {Edge Detection in Simple Scenes Using A Priori Information},
  pages = {371--381},
  journal = {IEEE Transactions on Computers},
  volume = {22},
  author = {Griffith, A.K.}
}
@article{Chermant2001,
  year = {2001},
  title = {Some Fields of Applications of Automatic Image Analysis in Civil Engineering},
  pages = {157--169},
  journal = {Cement {\&} Concrete Composites},
  volume = {23},
  author = {Chermant, J.-L. and Chermant, L. and Coster, M. and Dequiedt, A.-S. and Redon, C.}
}
@article{Thrift1983,
  number = {3},
  year = {1983},
  title = {Approximating Point-Set Images by Line Segments Using a Variation of the {H}ough Transform},
  pages = {383--394},
  journal = {Computer Vision, Graphics and Image Processing},
  volume = {21},
  annote = {key_radon},
  author = {Thrift, P.R. and Dunn, S.M.}
}
@misc{Rull1993,
  year = {1993},
  title = {{BARRY}: An Autonomous Train-Spotter},
  author = {Rull, P.H.}
}
@article{Schellman1980a,
  number = {3},
  year = {1980},
  title = {The flexibility of {DNA : II. Spontaneous} and ligand induced distortions},
  pages = {329-337},
  journal = {Biophysical Chemistry},
  volume = {11},
  author = {Schellman, J.A.}
}
@article{Tang2001,
  number = {8},
  year = {2001},
  title = {N-dimensional tensor voting and application to epipolar geometry estimation},
  pages = {829 -844},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {23},
  author = {Tang, Chi-Keung and Medioni, G. and Lee, Mi-Suen}
}
@article{Park1996,
  number = {11},
  year = {1996},
  title = {Scale-Space Using Mathematical Morphology},
  pages = {1121--1126},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {18},
  author = {Park, K.-R. and Lee, C.-N.}
}
@book{Haykin1999,
  edition = {second},
  year = {1999},
  title = {Neural Networks, a comprehensive foundation},
  publisher = {Prentice-Hall},
  author = {Haykin, S.}
}
@inproceedings{Faugeras1992,
  series = {Lecture Notes in Computer Science 588},
  month = {May},
  year = {1992},
  title = {What Can Be Seen in Three Dimensions with an Uncalibrated Stereo Rig},
  booktitle = {Second European Conference on Computer Vision},
  pages = {563--578},
  editor = {Sandini, G.},
  address = {Santa Margherita Ligure, Italy},
  publisher = {Springer},
  author = {Faugeras, O.D.}
}
@article{Dequiedt2001,
  year = {2001},
  title = {Study of Phase Dispersion in Concrete by Image Analysis},
  pages = {215--226},
  journal = {Cement \& Concrete Composites},
  volume = {23},
  author = {Dequiedt, A.-S. and Coster, M. and Chermant, L. and Chermant, J.-L.}
}
@article{Tang2002,
  number = {6},
  year = {2002},
  title = {Curvature-Augmented Tensor Voting for Shape Interference from Noisy 3D Data},
  pages = {858--864},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {24},
  author = {Tang, C.-K. and Medioni, G.}
}
@inproceedings{Hartley1992a,
  series = {Lecture Notes in Computer Science 588},
  month = {May},
  year = {1992},
  title = {Estimation of Relative Camera Positions for Uncalibrated Cameras},
  booktitle = {Second European Conference on Computer Vision},
  pages = {579--587},
  editor = {Sandini, G.},
  address = {Santa Margherita Ligure, Italy},
  publisher = {Springer},
  author = {Hartley, R.I.}
}
@article{Dalen2002,
  month = {November},
  year = {2002},
  title = {Determination of the Water Droplet Size Distribution of Fat Spreads using Confocal Scanning Laser Microscopy},
  pages = {116--133},
  journal = {Journal of Microscopy},
  volume = {208 Pt. 2},
  author = {Dalen, G. van}
}
@article{Bergsma2001,
  number = {4},
  year = {2001},
  title = {Velocity Estimation of Spots in 3D Confocal Images Sequences of Living Cells},
  pages = {261--272},
  journal = {Cytometry},
  volume = {43},
  author = {Bergsma, C.B.J. and Streekstra, G.J. and Smeulders, A.W.M. and Manders, E.M.M.}
}
@article{Florack1999,
  number = {2/3},
  year = {1999},
  title = {Pseudo-linear Scale-space Theory},
  pages = {247--259},
  journal = {International Journal of Computer Vision},
  volume = {31},
  author = {Florack, L.M.J. and Maas, R. and Niessen, W.J.}
}
@phdthesis{Florack1993,
  year = {1993},
  title = {The Syntactical Structure of Scalar Images},
  school = {University of Utrecht, The Netherlands},
  author = {Florack, L.M.J.}
}
@article{Welch1967,
  year = {1967},
  title = {The use of fast Fourier Transform for the estimation of power spectra: A method based on time averaging over short, modified periodograms},
  pages = {70-73},
  journal = {IEEE Transactions on Audio and Electroacoustics},
  volume = {15},
  author = {Welch, P.}
}
@article{Florack1998,
  number = {3},
  year = {1998},
  title = {The Intrinsic Structure of Optic Flow Incorporating Measurement Duality},
  pages = {263--286},
  journal = {International Journal of Computer Vision},
  volume = {27},
  author = {Florack, L.M.J. and Niessen, W.J. and Nielsen, M.}
}
@article{Florack1992,
  number = {6},
  month = {July},
  year = {1992},
  title = {Scale and the Differential Structure of Images},
  pages = {376--388},
  journal = {Image and Vision Computing},
  volume = {10},
  author = {Florack, L.M.J. and Haar Romeny, B.M. ter and Koenderink, J.J. and Viergever, M.A.}
}
@article{Florack1994,
  number = {4},
  month = {December},
  year = {1994},
  title = {Linear Scale-Space},
  pages = {325--351},
  journal = {Journal of Mathematical Imaging and Vision},
  volume = {4},
  author = {Florack, L.M.J. and Haar Romeny, B.M. ter and Koenderink, J.J. and Viergever, M.A.}
}
@book{Florack1997,
  year = {1997},
  title = {Image Structure},
  publisher = {Kluwer Academic Publishers},
  author = {Florack, L.M.J.}
}
@article{Kim1990,
  number = {2},
  year = {1990},
  title = {Shape Description of Biological Objects via Stereo Light Microscopy},
  pages = {475--489},
  journal = {IEEE Transactions on Systems},
  volume = {20},
  author = {Kim, N.H. and Bovik, A.C. and Aggarwal, S.J.}
}
@article{Borgefors1996,
  number = {3},
  year = {1996},
  title = {On digital distance transforms in three dimensions},
  pages = {344-371},
  journal = {Computer Vision and Image Understanding},
  volume = {64},
  author = {Borgefors, G.}
}
@article{Komenda2001,
  number = {2--3},
  year = {2001},
  title = {Automatic Recognition of Complex Microstructures using the Image Classifier},
  pages = {87--92},
  journal = {Materials Characterization},
  volume = {46},
  author = {Komenda, J.}
}
@article{Vetterli1984,
  year = {1984},
  title = {Simple {FFT} and {DCT} Algorithms with Reduced Number of Operations},
  pages = {267--278},
  journal = {Signal Processing},
  volume = {6},
  annote = {key_fft},
  author = {Vetterli, M. and Nussbaumer, H.J.}
}
@article{Vetterli1986,
  number = {3},
  year = {1986},
  title = {Filter Banks Allowing Perfect Reconstruction},
  pages = {219--244},
  journal = {Signal Processing},
  volume = {10},
  author = {Vetterli, M.}
}
@article{Florack1996,
  year = {1996},
  title = {The {Gaussian} Scale-Space Paradigm and the Multiscale Local Jet},
  pages = {61--75},
  journal = {International Journal of Computer Vision},
  volume = {18},
  author = {Florack, L.M.J. and Haar Romeny, B.M. ter and Viergever, M.A. and Koenderink, J.J.}
}
@phdthesis{Molenaar2003,
  month = {June},
  year = {2003},
  title = {Methods for molecular analysis in living cells},
  address = {Leiden, The Netherlands},
  school = {Leiden University Medical Center},
  author = {Molenaar, C.}
}
@inproceedings{Leavers1990,
  year = {1990},
  title = {The Dynamic Generalized {H}ough transform},
  booktitle = {Computer Vision -- ECCV90. Proceedings, 1990},
  pages = {592--594},
  editor = {O. Faugeras},
  publisher = {Springer-Verlag},
  author = {Leavers, V.F.}
}
@book{Leavers1992,
  year = {1992},
  title = {Shape Detection in Computer Vision Using the {H}ough Transform},
  address = {London},
  publisher = {Springer-Verlag},
  author = {Leavers, V.F.}
}
@article{Morgan2002,
  year = {2002},
  title = {Structure of the Mammalian Ribosome-Channel Complex at 17 Resolution},
  pages = {871-886},
  journal = {Journal of Molecular Biology},
  volume = {324},
  author = {Morgan, D.G. and Mnntret, J.-F. and Neuhof, A. and Rapoport, T.A. and Akey, C.W.}
}
@article{Su2003,
  year = {2003},
  title = {High resolution EELS using monochromator and high performance spectrometer: comparison of $V_2O_5$ {ELNES} with {NEXAFS} and band structure calculations},
  pages = {235-238},
  journal = {Micron},
  volume = {34},
  author = {Su, D.S. and Zandbergen, H.W. and Tiemeijer, P.C. and Kothleitner, G. and {H\"avecker}, M. and {H\'ebert}, C. and Knop-Gericke, A. and Freitag, B.H. and Hofer, F. and {Schl\"ogl}, R.}
}
@article{Thirion1995,
  number = {2},
  year = {1995},
  title = {Computing the differential characteristics of isointensity surfaces},
  pages = {190--202},
  journal = {Computer Vision and Image Understanding},
  volume = {61},
  author = {Thirion, J.P. and Gourdon, A.}
}
@article{Rao1992,
  number = {7},
  month = {July},
  year = {1992},
  title = {Computerized Flow Field Analysis: Oriented Texture Fields},
  pages = {693--709},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {14},
  author = {Rao, A.R. and Jain, R.C.}
}
@article{Potter1999,
  year = {1999},
  title = {Leginon: a system for fully automated acquisition of 1000 electron micrographs a day},
  pages = {153-161},
  journal = {Ultramicroscopy},
  volume = {77},
  author = {Potter, C.S. and Chu, H. and Frey, B. and Green, C. and Kisseberth, N. and Madden, T.J. and Miller, K.L. and Nahrstedt, K. and Pulokas, J. and Reilein, A. and Tcheng, D. and Weber, D. and Carragher, B.}
}
@article{Ferraro1988,
  number = {5},
  month = {May},
  year = {1988},
  title = {Relationship between Integral Transform Invariances and {Lie} Group Theory},
  pages = {738--742},
  journal = {Journal of the Optical Society of America A},
  volume = {5},
  author = {Ferraro, M. and Caelli, T.M.}
}
@article{Rao1991,
  number = {2},
  month = {March},
  year = {1991},
  title = {Computing Oriented Texture Fields},
  pages = {157--185},
  journal = {CVGIP: Graphical Models and Image Processing},
  volume = {53},
  author = {Rao, A.R. and Schunck, B.G.}
}
@article{Gaspar1997,
  year = {1997},
  title = {Partially Folded States of the Capsid Protein of Cowpea Severe Mosaic Virus in the Disassembly Pathway},
  pages = {456-466},
  journal = {Journal of Molecular Biology},
  volume = {273},
  author = {Gaspar, L.P. and Johnson, J.E. and Silva, J.L. and Poian, A.T. da}
}
@article{Rieger2004,
  number = {6},
  year = {2004},
  title = {A systematic approach to {nD} orientation representation},
  pages = {453-459},
  journal = {Image and Vision Computing},
  volume = {22},
  author = {Rieger, B. and Vliet, L.J. van}
}
@book{Papoulis1977,
  year = {1977},
  title = {Signal Analysis},
  address = {New York},
  publisher = {McGraw-Hill},
  author = {Papoulis, A.}
}
@article{Hanbury2001,
  number = {12},
  month = {December},
  year = {2001},
  title = {Morphological Operators on the Unit Circle},
  pages = {1842--1850},
  journal = {IEEE Transactions on Image Processing},
  volume = {10},
  author = {Hanbury, Allan G. and Serra, Jean}
}
@inbook{Porat1994a,
  year = {1994},
  title = {Digital Signal Processing of Random Signals: Theory and Methods},
  chapter = {11.4},
  publisher = {Prentice Hall},
  author = {Porat, B.}
}
@article{Villasenor1987,
  month = {December},
  year = {1987},
  title = {Optical Phase Obtained by Analogue Hartley Transformation},
  pages = {735--737},
  journal = {Nature},
  volume = {330},
  author = {Villasenor, J. and Bracewell, R.N.}
}
@article{Lacey1998,
  number = {5},
  year = {1998},
  title = {A Multi-Stage Approach to the Dense Estimation of Disparity from Stereo {SEM} Images},
  pages = {373--383},
  journal = {Image and Vision Computing},
  volume = {16},
  author = {Lacey, A.J. and Thacker, N.A. and Crossley, S. and Yates, R.B.}
}
@article{Sengupta2001,
  year = {2001},
  title = {Visualization of protein {S1} within the {30S} ribosomal subunit and its interaction with messenger {RNA}},
  pages = {11991-11996},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  volume = {98},
  author = {Sengupta, J. and Agrawal, R.K. and Frank, J.}
}
@article{Domer2003,
  number = {10},
  year = {2003},
  title = {High-speed transmission electron microscope},
  pages = {4369-4372},
  journal = {Review of Scientific Instruments},
  volume = {74},
  author = {{D\"omer}, H. and Bostanjoglo, O.}
}
@inproceedings{Lacey1996,
  year = {1996},
  title = {Surface Approximation from Industrial {SEM} Images},
  booktitle = {Proceedings of the British Machine Vision Conference},
  address = {Edinburgh, Scotland},
  author = {Lacey, A.J. and Thacker, N.A. and Yates, R.B.},
  organization = {University of Edinburgh}
}
@article{Kimia1992,
  year = {1992},
  title = {On the Evolution of Curves via a Function of Curvature. I. The Classical Case},
  pages = {438--458},
  journal = {Journal of Mathematical Analysis and Applications},
  volume = {163},
  author = {Kimia, B. and Tannenbaum, A. and Zucker, S.W.}
}
@unpublished{Vliet1998b,
  title = {Adaptive Filtering. From Scaleable Elliptic, and Banana to Leech Filters},
  author = {Vliet, L.J. van}
}
@article{Giro2004,
  number = {4},
  year = {2004},
  title = {Single Molecule Studies of {RNA} Secondary Structure: {AFM} of {TYMV} Viral {RNA}},
  pages = {235-245},
  journal = {Microscopy Research and Technique},
  volume = {65},
  author = {Giro, A. and Bergia, A. and Zuccheri, G. and Bink, H.H.J. and Pleij, C.W.A. and Samori, B.}
}
@inbook{Vliet1998a,
  edition = {2nd},
  year = {1998},
  title = {Cell Biology},
  pages = {109-120},
  editor = {Celis, J.E.},
  volume = {III},
  address = {New York},
  chapter = {Digital Fluorescence Imaging Using Cooled {CCD} Array Cameras},
  publisher = {Academic Press},
  author = {Vliet, L.J. van and Sudar, D. and Young, I.T.}
}
@unpublished{Vliet1998c,
  title = {Detection of End-points},
  author = {Vliet, L.J. van}
}
@article{Pulokas1999,
  year = {1999},
  title = {Improving the positional accuracy of the goniometer on the {Philips CM} series {TEM}},
  pages = {250-256},
  journal = {Journal of Structural Biology},
  volume = {128},
  author = {Pulokas, J. and Green, C. and Kisseberth, N. and Potter, C.S. and Carragher, B.}
}
@article{Ficz2005,
  number = {17},
  year = {2006},
  title = {Polycomb group complexes exchange rapidly in living {Drosophila}},
  pages = {3964-3976},
  journal = {Development},
  volume = {132},
  author = {Ficz, G. and Heintzmann, R. and Arndt-Jovin, D.J.}
}
@article{Thovert1993,
  month = {April},
  year = {1993},
  title = {Computerized Characterization of the Geometry of Real Porous Media: their Discretization, Analysis and Interpretation},
  pages = {65--79},
  journal = {Journal of Microscopy},
  volume = {170, Pt 1},
  author = {Thovert, J.F. and Salles, J. and Adler, P.M.}
}
@book{Kincaid1991,
  year = {1991},
  title = {Numerical analysis; mathematics of scientific computing},
  address = {Brooks/Cole},
  publisher = {Pacific Grove},
  author = {Kincaid,D.}
}
@article{Netten1994,
  year = {1994},
  title = {A fast scanner for fluorescence microscopy using a {2-D CCD} amd time delayed integration},
  pages = {184-192},
  journal = {Bioimaging},
  volume = {2},
  author = {Netten, H. and Vliet, L.J. van and Boddeke, F.R. and Jong, P. de and Young, I.T.}
}
@article{Loncaric1998,
  number = {8},
  year = {1998},
  title = {A Survey of Shape Analysis Techniques},
  pages = {983--1001},
  journal = {Pattern Recognition},
  volume = {31},
  author = {Loncaric, S.}
}
@article{Malladi1995,
  number = {2},
  month = {February},
  year = {1995},
  title = {Shape Modeling with Front Propagation: A Level Set Approach},
  pages = {158--175},
  journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
  volume = {17},
  author = {Malladi, R. and Sethian, J.A. and Vemuri, B.C.}
}
@book{Bronstein1999,
  edition = {4th},
  year = {1999},
  title = {Taschenbuch der Mathematik},
  address = {Thun, Frankfurt (Main)},
  publisher = {Verlag Harri Deutsch},
  author = {Bronstein, I. N. and Semendjajew, K. A. and Musiol, G. and {M\"uhlig}, H.}
}
@article{Kundur1996,
  number = {3},
  month = {May},
  year = {1996},
  title = {Blind Image Deconvolution},
  pages = {43--64},
  journal = {IEEE Signal Processing Magazine},
  volume = {13},
  author = {Kundur, D. and Hatzinakos, D.}
}
@article{Levi1970,
  number = {1},
  month = {August},
  year = {1970},
  title = {A grey-weighted skeleton},
  pages = {62-91},
  journal = {Information and Control},
  volume = {17},
  author = {Levi, G. and Montanari, U.}
}
@book{Press1992,
  edition = {2},
  year = {1992},
  title = {Numerical Recipes in C: The Art of Scientific Computing},
  address = {Cambridge},
  publisher = {Cambridge University Press},
  author = {Press, W.H. and Teukolsky, S.A. and Vetterling, W.T. and Flannery, B.P.}
}
@article{Luengo2005,
  number = {12},
  year = {2005},
  title = {The Generalized Radon Transform: Sampling, Accuracy and Memory Considerations},
  pages = {2494-2505},
  journal = {Pattern Recognition},
  volume = {38},
  author = {Luengo Hendriks, C.L. and Ginkel, M. van and Verbeek, P.W. and Vliet, L.J. van}
}
@inproceedings{Lambert2000,
  year = {2000},
  title = {Filtering and Segmentation: the Specificity of Color Images},
  booktitle = {International Conference on Color in Graphics and Image Processing CGIP'2000},
  author = {Lambert, P. and Macaire, L.}
}
@article{Rivetti1998,
  number = {1},
  year = {1998},
  title = {Polymer chain statistics and conformational analysis of {DNA} molecules with bends or sections of different flexibility},
  pages = {41-59},
  journal = {Journal of Molecular Biology},
  volume = {280},
  author = {Rivetti, C. and Walker, C. and Bustamante, C.}
}
@inproceedings{Luengo2000,
  series = {Proc. SPIE Electronic Imaging 2000 Conf.},
  year = {2000},
  title = {Improving resolution to reduce aliasing in an undersampled image sequence},
  booktitle = {Sensors and Camera Systems for Sensors and Camera Systems for Scientific, Industrial, and Digital Photography Applications},
  pages = {2134--222},
  editor = {Blouke, M. M. and Williams, G.M. and Sampat, N. and Yeh, T.},
  volume = {3965},
  address = {San Jose},
  author = {Luengo Hendriks, C.L. and Vliet, L.J. van}
}
@inproceedings{Luengo2003,
  series = {Lecture Notes on Computer Science},
  year = {2003},
  title = {Basic Morphological Operations, Band-Limited Images and Sampling},
  booktitle = {Scale Space Methods in Computer Vision, Proceedings of the Fourth International Conference, Scale-Space 2003},
  pages = {313-324},
  editor = {Griffin, L.D. and Lillholm, M.},
  volume = {2695},
  address = {Berlin},
  publisher = {Springer-Verlag},
  author = {Luengo Hendriks, C.L. and Vliet, L.J. van}
}
@article{Rivetti1996,
  year = {1996},
  title = {Scanning Force Microscopy of {DNA} Deposited onto Mica: Equilibration versus Kinetic Trapping Studied by Statistical Polymer Chain Analysis},
  pages = {919-932},
  journal = {Journal of Molecular Biology},
  volume = {264},
  author = {Rivetti, C. and Guthold, M. and Bustamante, C.}
}
@article{Kroustrup1988,
  month = {February},
  year = {1988},
  title = {Stereological Analysis of Three-Dimensional Structure Organization of Surfaces in Multiphase Specimens: Statistical Methods and Model-Inferences},
  pages = {135--152},
  journal = {Journal of Microscopy},
  volume = {149, Pt 2},
  author = {Kroustrup, J.P. and Gundersen, H.J.G. and V,h, M.}
}
@article{Saxl1993,
  month = {April},
  year = {1993},
  title = {Contact Distances and Random Free Paths},
  pages = {53--64},
  journal = {Journal of Microscopy},
  volume = {170, Pt 1},
  author = {Saxl, I.}
}
@article{Hildreth1984,
  year = {1984},
  title = {The computation of the velocity field},
  pages = {189-220},
  journal = {Proceedings of the Royal Society of London B},
  volume = {221},
  author = {Hildreth, E.C.}
}
@article{Summerscales2001,
  month = {February},
  year = {2001},
  title = {Voronoi Cells, Fractal Dimensions and Fibre Composites},
  pages = {153--162},
  journal = {Journal of Microscopy},
  volume = {201, Pt 2},
  author = {Summerscales, J. and Guild, F.J. and Pearce, N.R.L. and Russell, P.M.}
}
@article{Ruiz2003,
  year = {2003},
  title = {The 10.8- structure of Saccharomyces cerevisiae phosphofructokinase determined by cryoelectron microscopy: localization of putative fructose 6-phosphate binding sites},
  pages = {124-134},
  journal = {Journal of Structural Biology},
  volume = {143},
  author = {Ruiz, T. and {Koppenschl\"ager}, G. and Radermacher, M.}
}
@article{Lagerholm2006,
  number = {10},
  year = {2006},
  title = {Analysis method for measuring submicroscopic distances with blinking Quantum Dots},
  pages = {3050-3060},
  journal = {Biophysical Journal},
  volume = {91},
  author = {Lagerholm, B.C. and Averett, L. and Weinreb, G.E. and Jacobson, K. and Thompson, N.L.}
}
@article{Berney2003,
  number = {6},
  year = {2003},
  title = {{FRET} or no {FRET}: A Quantitative Comparison},
  pages = {3992-4010},
  journal = {Biophysical Journal},
  volume = {84},
  author = {Berney, C. and Danuser, G.}
}
@article{Harrigan1984,
  year = {1984},
  title = {Characterization of Microstructural Anisotropy in Orthotropic Materials Using a Second Rank Tensor},
  pages = {761--767},
  journal = {Journal of Materials Science},
  volume = {19},
  author = {Harrigan, T.P. and Mann, R.W.}
}
@article{Mironov2003,
  year = {2003},
  title = {{ER-to-Golgi} Carriers Arise through Direct En Bloc Protrusion and Multistage Maturation of Specialized {ER} Exit Domains},
  pages = {583-594},
  journal = {Developmental Cell},
  volume = {5},
  author = {Mironov, A.A. and Mironov, A.A.Jr. and Beznoussekno, G.V. and Trucco, A. and Lupetti, P. and Smith, J.D. and Geerts, W.J.C. and Koster, A.J. and Burger, K.N.J. and Martone, M.E. and Deerinck, T.J. and Ellisman, M.H. and Luini, A.}
}
@book{Frankel1997,
  year = {1997},
  title = {The Geometry of Physics},
  address = {Cambridge},
  publisher = {Cambridge University Press},
  author = {T. Frankel}
}
@article{Shaner2005,
  year = {2005},
  title = {A guide to choosing fluorescent proteins},
  pages = {905-909},
  journal = {Nature Methods},
  volume = {2},
  author = {Shaner, N.C. and Steinbach, P.A. and Tsien, R.Y.}
}
@inproceedings{Lozier1994,
  series = {Proceedings of Symposia in Applied Mathematics},
  month = {December},
  year = {1994},
  title = {Numerical Evaluation of Special Functions},
  booktitle = {Mathematics of Computation 1943--1993: A Half-Century of Computational Mathematics},
  pages = {79--125},
  note = {{\tt http://math.nist.gov/nesf/}},
  editor = {Gautschi, W.},
  volume = {48},
  author = {Lozier, D.W. and Olver, F.W.J.},
  organization = {American Mathematical Society}
}
@inbook{Simmonds1982a,
  year = {1982},
  title = {A Brief on Tensor Analysis},
  chapter = {1,2},
  publisher = {Spring-Verlag},
  author = {Simmonds, J.G.}
}
@article{Schoenle2002,
  number = {10},
  year = {2002},
  title = {Calculation of vectorial three-dimensional transfer functions in large angle focusing systems},
  pages = {2121-2126},
  journal = {Journal of the Optical Society of America A},
  volume = {19},
  author = {{Sch\"onle}, A. and Hell, S.W.}
}
@phdthesis{Kempen1999a,
  year = {1999},
  title = {Image Restoration in Fluorescence Microscopy},
  address = {Delft, The Netherlands},
  school = {Delft University of Technology},
  author = {Kempen, G.M.P. van}
}
@article{Min1995,
  year = {1995},
  title = {Comparison of three-dimensional imaging properties between two-photon and single-photon fluorescence microscopy},
  pages = {128--137},
  journal = {Journal of Microscopy},
  volume = {177},
  author = {Min, G. and Sheppard, C.J.R.}
}
@article{Min1990,
  year = {1990},
  title = {Image formation in two-photon fluorescence microscopy},
  pages = {104--106},
  journal = {Optik},
  volume = {86},
  author = {Min, G. and Sheppard, C.J.R.}
}
@phdthesis{Karlholm1998,
  year = {1998},
  title = {Local Signal Models for Image Sequence Analysis},
  address = {{Link\"oping}, Sweden},
  school = {{Link\"oping} University},
  author = {Karlholm, J.}
}
@article{Kimoto2005,
  year = {2005},
  title = {Advantages of a monochromator for bandgap measurements using electron energy-loss spectroscopy},
  pages = {185-189},
  journal = {Micron},
  volume = {36},
  author = {Kimoto, K. and Kothleitner, G. and Grogger, W. and Matsui, Y. and Hofer, F.}
}
@book{Mallat2001,
  edition = {2nd edition},
  year = {1999},
  title = {A wavelet tour of signal processing},
  address = {New York},
  publisher = {John Wiley \& Sons},
  author = {Mallat, S.G.}
}
@book{Walter1994,
  edition = {3},
  year = {1994},
  title = {{Einf\"uhrung in die Theorie der Distributionen}},
  publisher = {Spektrum Akademischer Verlag},
  author = {Walter, W.}
}
@misc{GinkelWWWqqnvphbv2001,
  title = {http://www.ph.tn.tudelft.nl/\char126michael/qqnvphnv.html},
  key = {ZZZZ}
}
@article{Cucchiara1998,
  number = {7},
  month = {July},
  year = {1998},
  title = {The Vector-Gradient Hough Transform},
  pages = {746--750},
  journal = {IEEE Transactions on Pattern Recognition and Machine Intelligence},
  volume = {20},
  annote = {key_radon},
  author = {Cucchiara, R. and Filicori, F.}
}
@inproceedings{Mullikien1994,
  month = {February 9-10},
  year = {1994},
  title = {Methods for {CCD} camera characterization},
  booktitle = {SPIE Proceedings},
  pages = {73-84},
  editor = {Titus, H.C. and Waks, A.},
  volume = {2173},
  address = {S