Changeset 789 for qipapers.bib
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qipapers.bib
r788 r789 15714 15714 pages = {{131-135}}, 15715 15715 journal = {{Biomedical Papers}}, 15716 volume = {{147} 15716 volume = {{147}}, 15717 author = {Dvor\\\'ak, Zdenek and Pascussi, Jean-Marc and Modriansk\\\'y, Martin} 15718 } 15719 @article{Medalion2010, 15720 number = {{4}}, 15721 year = {2010}, 15722 title = {{Coupling of twist and writhe in short DNA loops 15723 }}, 15724 pages = {{045101}}, 15725 journal = {{The Journal of Chemical Physics}}, 15726 volume = {{132}}, 15727 author = {Medalion, Shlomi and Rappaport, Shay M. and Rabin, Yitzhak} 15728 } 15729 @article{Cherif2006, 15730 number = {{2}}, 15731 year = {2006}, 15732 title = {{Clinically Related Protein-Peptide Interactions Monitored in Real Time on Novel Peptide Chips by Surface Plasmon Resonance Imaging}}, 15733 pages = {{255-262}}, 15734 journal = {{Clinical Chemistry}}, 15735 volume = {{52}}, 15736 author = {Cherif, Boutheina and Roget, Andr\\\'e and Villiers, Christian L. and Calemczuk, Roberto and Leroy, Vincent and Marche, Patrice N. and Livache, Thierry and Villiers, Marie-Bernadette} 15737 } 15738 @article{Gibson1991, 15739 number = {{10}}, 15740 year = {1991}, 15741 title = {{Experimental test of an analytical model of aberration in an oil-immersion objective lens used in three-dimensional light microscopy}}, 15742 pages = {{1601-1613}}, 15743 journal = {{Journal of the Optical Society of America A}}, 15744 volume = {{8}}, 15745 author = {Gibson, Sarah Frisken and Lanni, Frederick} 15746 } 15747 @misc{Bouchiat2007, 15748 year = {2007}, 15749 title = {{Spatial Constraint Corrections to the Elasticity of dsDNA Measured with Magnetic Tweezers}}, 15750 author = {Bouchiat, C.} 15751 } 15752 @article{Bouchiat2006, 15753 number = {{03}}, 15754 year = {2006}, 15755 title = {{Entropic elasticity of double-strand DNA subject to simple spatial constraints}}, 15756 pages = {{P03019}}, 15757 journal = {{Journal of Statistical Mechanics: Theory and Experiment}}, 15758 author = {Bouchiat, C.} 15759 } 15760 @article{Yoshinaga2002, 15761 number = {{22}}, 15762 year = {2002}, 15763 title = {{Multiscaling in a long semiflexible polymer chain in two dimensions}}, 15764 journal = {{Journal of Chemical Physics}}, 15765 volume = {{116}}, 15766 author = {Yoshinaga, Natsuhiko and Yoshikawa, Kenichi and Kidoaki, Satoru} 15767 } 15768 @article{Sottas1999, 15769 year = {1999}, 15770 title = {{Brownian Dynamics Simulation of DNA Condensation}}, 15771 pages = {{1858-1870}}, 15772 journal = {{Biophysical Journal}}, 15773 volume = {{77}}, 15774 author = {Sottas, Pierre-Edouard and Larquet, Eric and Stasiak, Andrzej and Dubochet, Jacques} 15775 } 15776 @article{Yamakawa1976a, 15777 number = {{12}}, 15778 year = {1976}, 15779 title = {{Statistical mechanics of helical wormlike chains. I. Differential equations and moments}}, 15780 pages = {{5222-5228}}, 15781 journal = {{The Journal of Chemical Physics}}, 15782 volume = {{64}}, 15783 author = {Yamakawa, Hiromi and Fujii, Motoharu} 15784 } 15785 @article{Odijk1979, 15786 year = {1979}, 15787 title = {{On the Ionic-Strength Dependence of the Intrinsic Viscosity of DNA}}, 15788 pages = {{3111-3113}}, 15789 journal = {{Biopolymers}}, 15790 volume = {{18}}, 15791 author = {Odijk, Theo} 15792 } 15793 @article{Sheppard1997, 15794 number = {{3}}, 15795 year = {1997}, 15796 title = {{Effects of specimen refractive index on confocal imaging}}, 15797 pages = {{366-374}}, 15798 journal = {{Journal of Microscopy}}, 15799 volume = {{185}}, 15800 author = {Sheppard, C. J. R. and T\\\"or\\\"ok, P.} 15801 } 15802 @article{Vologodskii1994, 15803 number = {{20}}, 15804 year = {1994}, 15805 title = {{DNA Extension under the Action of an External Force}}, 15806 pages = {{5623-5625}}, 15807 journal = {{Macromolecules}}, 15808 volume = {{27}}, 15809 author = {Vologodskii, Alexander} 15810 } 15811 @article{Rayleigh1919, 15812 year = {1919}, 15813 title = {{On the problem of random vibrations, and of random flights in one, two, or three dimensions}}, 15814 pages = {{321-347}}, 15815 journal = {{Philosophical Magazine}}, 15816 volume = {{37}}, 15817 author = {Rayleigh, Lord} 15818 } 15819 @article{Lukic2007, 15820 year = {2007}, 15821 title = {{Motion of a colloidal particle in an optical trap}}, 15822 pages = {{011112}}, 15823 journal = {{Physical Review E}}, 15824 volume = {{76}}, 15825 author = {{Luki\c{c}}, B. and Jeney, S. and Sviben, Z. and Kulik, A. and Florin, E.-L. and {Forr\'o}, L.} 15826 } 15827 @article{Storm2003a, 15828 number = {{5}}, 15829 year = {2003}, 15830 title = {{The bend stiffness of S-DNA}}, 15831 pages = {{760-766}}, 15832 journal = {{Europhysics Letters (EPL)}}, 15833 volume = {{62}}, 15834 author = {Storm, C. and Nelson, P. C.} 15835 } 15836 @article{Odijk1977, 15837 year = {1977}, 15838 title = {{Polyelectrolytes near the Rod Limit}}, 15839 pages = {{477-483}}, 15840 journal = {{Journal of Polymer Science: Polymer Physics Edition}}, 15841 volume = {{15}}, 15842 author = {Odijk, Theo} 15843 } 15844 @article{Beausang2007b, 15845 year = {2007}, 15846 title = {{Diffusive hidden Markov model characterization of DNA looping dynamics in tethered particle experiments}}, 15847 journal = {{Physical Biology}}, 15848 author = {Beausang, John F. and Nelson, Philip C.} 15849 } 15850 @article{Fixman1973, 15851 number = {{4}}, 15852 year = {1973}, 15853 title = {{Polymer conformational statistics. I. Probability distribution}}, 15854 pages = {{1553-1558}}, 15855 journal = {{The Journal of Chemical Physics}}, 15856 volume = {{58}}, 15857 author = {Fixman, Marshall and Alben, Richard} 15858 } 15859 @article{Gupta1993, 15860 number = {{2}}, 15861 year = {1993}, 15862 title = {{Mean-field theory of phase transitions in liquid-crystalline polymers}}, 15863 pages = {{1588-1596}}, 15864 journal = {{Journal of Chemical Physics}}, 15865 volume = {{98}}, 15866 author = {Gupta, Anshu M. and Edwards, Sam F.} 15867 } 15868 @article{Butler2005, 15869 year = {2005}, 15870 title = {{Brownian dynamics simulations of a flexible polymer chain which includes continuous resistance and multibody hydrodynamic interactions}}, 15871 journal = {{The Journal of Chemical Physics}}, 15872 volume = {{122}}, 15873 author = {Butler, Jason E. and Shaqfeh, Eric S.G.} 15874 } 15875 @article{Csiszar1991, 15876 number = {{4}}, 15877 year = {1991}, 15878 title = {{Why Least Squares and Maximum Entropy? An Axiomatic Approach to Inference for Linear Inverse Problems}}, 15879 pages = {{2032-2066}}, 15880 journal = {{The Annals of Statistics}}, 15881 volume = {{19}}, 15882 author = {Csiszar, Imre} 15883 } 15884 @inproceedings{Dietrich2006, 15885 year = {2006}, 15886 title = {{Advances in the Development of a Novel Method to be used in Proteomics using Gold Nanobeads}}, 15887 booktitle = {{Ultrasensitive and Single-Molecule Detection Technologies}}, 15888 editor = {Enderlein, J\\\"org and Gryczynski, Zygmunt K.}, 15889 volume = {{6092}}, 15890 publisher = {{Proceedings of SPIE}}, 15891 author = {Dietrich, Heidelinde R.C. and Young, Ian T. and Garini, Yuval} 15892 } 15893 @inproceedings{Dietrich2007, 15894 year = {2007}, 15895 title = {A New Optical Method for Characterizing Single Molecule Interactions based on Dark Field Microscopy}, 15896 booktitle = {{Ultrasensitive and Single-Molecule Detection Technologies II}}, 15897 pages = {644403-1 - 64403-8}, 15898 editor = {Enderlein, J. and Gryczynski, Z.K.}, 15899 volume = {{6444}}, 15900 publisher = {{Proceedings of SPIE}}, 15901 author = {Dietrich, Heidelinde R.C. and Vermolen, Bart J. and Rieger, Bernd and Young, Ian T. and Garini, Yuval} 15902 } 15903 @article{Torok1996, 15904 number = {{3}}, 15905 year = {1996}, 15906 title = {{Dark-field and differential phase contrast imaging modes in confocal microscopy using a half-aperture stop}}, 15907 pages = {{101-106}}, 15908 journal = {{Optik}}, 15909 volume = {{103}}, 15910 author = {T\\\"or\\\"ok, P. and Sheppard, C. J. R. and Laxzik, Z.} 15911 } 15912 @article{Dietrich2002, 15913 number = {{1}}, 15914 year = {2002}, 15915 title = {{Relationship of Lipid Rafts to Transient Confinement Zones Detected by Single Particle Tracking}}, 15916 pages = {{274-284}}, 15917 journal = {{Biophysical Journal}}, 15918 volume = {{82}}, 15919 author = {Dietrich, Chrisian and Yang, Bing and Fujiwara, Takahiro and Kusumi, Akihiro and Jacobson, Ken} 15920 } 15921 @article{Schafer1991, 15922 number = {{6334}}, 15923 year = {1991}, 15924 title = {{Transcription by single molecules of RNA polymerase observed by light microscopy}}, 15925 pages = {{444-448}}, 15926 journal = {{Nature}}, 15927 volume = {{352}}, 15928 author = {Schafer, Dorothy A. and Gelles, Jeff and Sheetz, Michael P. and Landick, Robert} 15929 } 15930 @book{Mazo2002, 15931 series = {{International series of monographs on physics}}, 15932 year = {2002}, 15933 title = {{Brownian Motion: fluctuations, dynamics, and applications}}, 15934 address = {{Oxford}}, 15935 publisher = {{Clarendon Press}}, 15936 author = {Mazo, Robert M.} 15937 } 15938 @article{Deng2009, 15939 number = {{10}}, 15940 year = {2009}, 15941 title = {{Effect of aberration on height calibration in three-dimensional localization-base microscoyp and particle tracking}}, 15942 pages = {{1886-1890}}, 15943 journal = {{Applied Optics}}, 15944 volume = {{48}}, 15945 author = {Deng, Yi. and Shaevitz, Joshua W.} 15946 } 15947 @article{Han2006, 15948 year = {2006}, 15949 title = {{Brownian Motion of an Ellipsoid}}, 15950 journal = {{Science}}, 15951 volume = {{314}}, 15952 author = {Han, Y. and Alsayed, A.M. and Nobili, M. and Zhang, J. and Lubensky, T.C. and Yodh, A.G.} 15953 } 15954 @article{Dietrich2009, 15955 year = {2009}, 15956 title = {Tethered Particle Motion Mediated by Scattering from Gold Nanoparticles and Darkfield Microscopy}, 15957 pages = {{031795}}, 15958 journal = {{Journal of Nanophotonics}}, 15959 volume = {{3}}, 15960 author = {Dietrich, Heidelinde R. C. and Rieger, Bernd and Wiertz, Frank G.M. and de Groote, Frederik H. and Heering, Hendrik A. and Young, Ian T. and Garini, Yuval} 15961 } 15962 @article{Shaevitz2007, 15963 number = {{9}}, 15964 year = {2007}, 15965 title = {{Enhanced three-dimensional deconvolution microscopy using a measured depth-varying point-spread function}}, 15966 pages = {{2622-2627}}, 15967 journal = {{Journal of the Optical Society of America A}}, 15968 volume = {{24}}, 15969 author = {Shaevitz, Joshua W. and Fletcher, Daniel A.} 15970 } 15971 @book{Doi1986, 15972 year = {1986}, 15973 title = {{The Theory of Polymer Dynamics}}, 15974 address = {{New York}}, 15975 publisher = {{Oxford University Press}}, 15976 author = {Doi, M. and Edwards, S.F. } 15977 } 15978 @article{Dhar2002, 15979 number = {{6}}, 15980 year = {2002}, 15981 title = {{Triple Minima in the Free Energy of Semiflexible Polymers}}, 15982 pages = {{065502}}, 15983 journal = {{Physical Review Letters}}, 15984 volume = {{89}}, 15985 author = {Dhar, Abhishek and Chaudhuri, Debasish} 15986 } 15987 @article{Watkins2004, 15988 number = {{6}}, 15989 year = {2004}, 15990 title = {{Information Bounsd and Optimal Analysis of Dynamic Single Molecule Measurements}}, 15991 pages = {{4015-4029}}, 15992 journal = {{Biophysical Journal}}, 15993 volume = {{86}}, 15994 author = {Watkins, Lucas P. and Yang, Haw} 15995 } 15996 @article{Elburg2007, 15997 number = {{1}}, 15998 year = {2007}, 15999 title = {{Improved correction of axial geometrical distortion in index-mismatched fluorescent confocal microscopic images using high-aperture objective lenses}}, 16000 pages = {{45-54}}, 16001 journal = {{Journal of Microscopy}}, 16002 volume = {{228}}, 16003 author = {Elburg, H.J. van and Kuypers, L.C. and Decraemer, W.F. and Dirckx, J.J.J.} 16004 } 16005 @phdthesis{Li2006, 16006 year = {2006}, 16007 title = {{DNA entropic elasticity for short molecules attached to beads}}, 16008 author = {Li, Jinyu and Nelson, Philip C. and Betterton, M.D.} 16009 } 16010 @book{Cohen1988, 16011 series = {{Statistics: Textbooks and monographs}}, 16012 year = {1988}, 16013 title = {{Parameter estimation in reliability and life span models}}, 16014 volume = {{96}}, 16015 address = {{New York}}, 16016 publisher = {{Marcel Dekker, Inc}}, 16017 author = {Cohen, A. 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M.} 16076 } 16077 @article{Smith1992, 16078 number = {{5085}}, 16079 year = {1992}, 16080 title = {{Direct Mechanical Measurement of the Elasticity of Single DNA Molecules by Using Magnetic Beads}}, 16081 pages = {{1122-1126}}, 16082 journal = {{Science}}, 16083 volume = {{258}}, 16084 author = {Smith, Steven B. and Finzi, Laura and Bustamante, Carlos} 16085 } 16086 @article{Bao2002, 16087 number = {{8}}, 16088 year = {2002}, 16089 title = {{High-Sensitivity Detection of DNA Hybridization on Microarrays Using Resonance Light Scattering}}, 16090 pages = {{1792-1979}}, 16091 journal = {{Analytical Chemistry}}, 16092 volume = {{74}}, 16093 author = {Bao, Paul and Frutor, Anthony G. and Greef, Charles and Lahiri, Joydeep and Muller, Uwe and Peterson, Todd C. and Warden, Laurence and Xie, Xinying} 16094 } 16095 @article{Baumann1997, 16096 year = {1997}, 16097 title = {{Ionic effects on the elasticity of single DNA molecules}}, 16098 pages = {{6185-6190}}, 16099 journal = {{Proceedings of the National Academy of Sciences of the USA}}, 16100 volume = {{94}}, 16101 author = {Baumann, Christoph G. and Smith, Steven B. and Bloomfield, Victor A. and Bustamante, Carlos} 16102 } 16103 @article{Vandenberg1991, 16104 number = {{1}}, 16105 year = {1991}, 16106 title = {{Structure of 3-aminopropyl triethoxy silane on silicon oxide}}, 16107 pages = {{103-118}}, 16108 journal = {{Journal of Colloid and Interface Science}}, 16109 volume = {{147}}, 16110 author = {Vandenberg, Elaine T. and Bertilsson, Lars and Liedberg, Bo and Uvdal, Kajsa and Erlandsson, Ragnar and Elwing, Hans and Lundstrom, Ingemar} 16111 } 16112 @article{Blumberg2005, 16113 year = {2005}, 16114 title = {{Three-Dimensional Characterization of Tethered Microspheres by Total Internal Reflection Fluorescence Microscopy}}, 16115 pages = {{1272-1281}}, 16116 journal = {{Biophysical Journal}}, 16117 volume = {{89}}, 16118 author = {Blumberg, Seth and Gajraj, Arivalagan and Pennington, Matthew W.} 16119 } 16120 @misc{Neumann2001, 16121 month = {January 22, 2001}, 16122 year = {2001}, 16123 title = {{Entropic Elasticity of Weakly Perturbed Polymers}}, 16124 pages = {11}, 16125 publisher = {{The Energy Institute, The Pennsylvania State University}}, 16126 author = {Neumann, Richard M.} 16127 } 16128 @article{Ommering2010, 16129 number = {{15}}, 16130 year = {2010}, 16131 title = {{Mobility and height detection of particle labels in an optical evanescent wave biosensor with single-label resolution}}, 16132 pages = {{155501}}, 16133 journal = {{Journal of Physics D: Applied Physics}}, 16134 volume = {{43}}, 16135 author = {van Ommering, Kim and Somers, Philip A. and Koets, Marjo and Schleipen, Jean J.H.B. and van Ijzendoorn, Leo J. and Prins, Menno W.J.} 16136 } 16137 @article{Heaton2001, 16138 number = {{7}}, 16139 year = {2001}, 16140 title = {{Electrostatic surface plasmon resonance: Direct electric field-induced hybridization and denaturation in monolayer nucleic acid films and label-free discrimination of base mismatches}}, 16141 pages = {{3701-3704}}, 16142 journal = {{Proceedings of the National Academy of Sciences of the USA}}, 16143 volume = {{98}}, 16144 author = {Heaton, Richard J. and Peterson, Alexander W. and Georgiadis, Rosina M.} 16145 } 16146 @article{Gobush1972, 16147 number = {{7}}, 16148 year = {1972}, 16149 title = {{Statistical Mechanics of Wormlike Chains. I. Asymptotic Behavior}}, 16150 pages = {{2839-2843}}, 16151 journal = {{The Journal of Chemical Physics}}, 16152 volume = {{57}}, 16153 author = {Gobush, William and Yamakawa, Hiromi and Stockmayer, W. H. and Magee, W. S.} 16154 } 16155 @article{Henderson2001, 16156 number = {{4}}, 16157 year = {2001}, 16158 title = {{Exploring the Confidence Interval for a Binomial Parameter in a First Course in Statistical Computing}}, 16159 pages = {{337-344}}, 16160 journal = {{The American Statistician}}, 16161 volume = {{55}}, 16162 author = {Henderson, Michael and Meyer, Mary C.} 16163 } 16164 @article{Winkler1994, 16165 number = {{9}}, 16166 year = {1994}, 16167 title = {{Models and equilibrium properties of stiff molecular chains}}, 16168 pages = {{8119-8129}}, 16169 journal = {{journal of Chemical Physics}}, 16170 volume = {{101}}, 16171 author = {Winkler, Roland G. and Reineker, Peter and Harnau, Ludger} 16172 } 16173 @article{William1972, 16174 number = {{7}}, 16175 year = {1972}, 16176 title = {{Statistical Mechanics of Wormlike Chains. I. Asymptotic Behavior}}, 16177 pages = {{2839-2843}}, 16178 journal = {{The Journal of Chemical Physics}}, 16179 volume = {{57}}, 16180 author = {William, Gobush and Hiromi, Yamakawa and Stockmayer, W. H. and Magee, W. S.} 16181 } 16182 @article{Peterlinz1997, 16183 year = {1997}, 16184 title = {{Observation of Hybridization and Dehybridization of Thiol-Tethered DNA Using Two-Color Surface Plasmon Resonance Spectroscopy}}, 16185 pages = {{3401-3402}}, 16186 journal = {{Journal of the American Chemical Society}}, 16187 volume = {{119}}, 16188 author = {Peterlinz, Kevin A. and Georgiadis, Rosina M. and Herne, Tonya M. and Tarlov, Michael J.} 16189 } 16190 @article{Morriss2010, 16191 number = {{3}}, 16192 year = {2010}, 16193 title = {{A systematically coarse-grained model for DNA and its predictions for persistence length, stacking, twist, and chirality}}, 16194 pages = {{035105}}, 16195 journal = {{The Journal of Chemical Physics}}, 16196 volume = {{132}}, 16197 author = {Morriss-Andrews, Alex and Rottler, Joerg and Plotkin, Steven S.} 16198 } 16199 @article{Chandrasekhar1943, 16200 number = {{1}}, 16201 year = {1943}, 16202 title = {{Stochastic Problems in Physics and Astronomy}}, 16203 pages = {{2-87}}, 16204 journal = {{Revieuws of Modern Physics}}, 16205 volume = {{15}}, 16206 author = {Chandrasekhar, S.} 16207 } 16208 @inproceedings{Ram2005, 16209 series = {{Proceedings of SPIE}}, 16210 year = {2005}, 16211 title = {{How accurately can a single molecule be localized in three dimensions using a fluorescence microscope?}}, 16212 booktitle = {{Imaging, Manipulation and Analysis of Biomolecule and Cells: Fundamentals and Applications III}}, 16213 pages = {426-435}, 16214 volume = {{5699}}, 16215 author = {Ram, Sripad and Ward, E. Sally and Ober, Raimond J.} 16216 } 16217 @book{Papoulis1991, 16218 series = {{McGraw-Hill series in electrical engineering, Communications and signal processing}}, 16219 edition = {{Third edition}}, 16220 year = {1991}, 16221 title = {{Probability, random variables, and stochastic processes}}, 16222 address = {{Singapore}}, 16223 publisher = {{McGraw-Hill}}, 16224 author = {Papoulis, Athanasios} 16225 } 16226 @inproceedings{Ram2007, 16227 year = {2007}, 16228 title = {{A novel approach to determining the three-dimensional location of microscopic objects with applications to 3D particle tracking}}, 16229 booktitle = {{Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XIV}}, 16230 pages = {64430D}, 16231 editor = {Conchello, Jose-Angel and Cogswell, Carol J. and Wilson, Tony}, 16232 volume = {{6443}}, 16233 publisher = {{Proceedings of SPIE}}, 16234 author = {Ram, Sripad and Chao, Jerry and Prabhat, Prashant and Ward, E. Sally and Ober, Raimond J.} 16235 } 16236 @article{Wu2005, 16237 year = {2005}, 16238 title = {{Three-dimensional fluorescent particle tracking at micron-scale using a single camera}}, 16239 pages = {{461-465}}, 16240 journal = {{Experiments in Fluids}}, 16241 volume = {{38}}, 16242 author = {Wu, Mingming and Roberts, John W. and Buckley, Mark} 16243 } 16244 @article{Maier2000, 16245 number = {{22}}, 16246 year = {2000}, 16247 title = {{Replication by a single DNA polymerase of a stretched single-stranded DNA}}, 16248 pages = {{12002-12007}}, 16249 journal = {{Proceedings of the National Academy of Sciences of the USA}}, 16250 volume = {{97}}, 16251 author = {Maier, Berenike and Bensimon, David and Croquette, Vincent} 16252 } 16253 @misc{Odijk2005, 16254 month = {August 4, 2005}, 16255 year = {2005}, 16256 title = {{Note on DNA grafted to a surface (experiments Heidi Dietrich, TU Delft)}}, 16257 author = {Odijk, Theo} 16258 } 16259 @article{Zimm1956, 16260 number = {{2}}, 16261 year = {1956}, 16262 title = {{Dynamics of Polymer Molecules in Dilute Solution: Viscoelasticity, Flow Birefringence and Dielectric Loss}}, 16263 pages = {{269-278}}, 16264 journal = {{The Journal of Chemical Physics}}, 16265 volume = {{24}}, 16266 author = {Zimm, Bruno H.} 16267 } 16268 @article{Sadr2007, 16269 year = {2007}, 16270 title = {{Diffusion-induced bias in near-wall velocimetry}}, 16271 pages = {{443-456}}, 16272 journal = {{Journal of Fluid Mechanics}}, 16273 volume = {{577}}, 16274 author = {Sadr, Reza and Hohenegger, Christel and Li, Haifeng and Mucha, Peter J. and Yoda, Minami} 16275 } 16276 @article{Qian2000b, 16277 number = {{1}}, 16278 year = {2000}, 16279 title = {{Single-Particle Tracking: Brownian Dynamics of Viscoelastic Materials}}, 16280 pages = {{137-143}}, 16281 journal = {{Biophysical Journal}}, 16282 volume = {{79}}, 16283 author = {Qian, Hong} 16284 } 16285 @article{Pirrung2002, 16286 number = {{8}}, 16287 year = {2002}, 16288 title = {{How to Make a DNA Chip}}, 16289 pages = {{1276-1289}}, 16290 journal = {{Angewandte Chemie International Edition}}, 16291 volume = {{41}}, 16292 author = {Pirrung, Michael C.} 16293 } 16294 @article{Marko2003, 16295 number = {{3}}, 16296 year = {2003}, 16297 title = {{The micromechanics of DNA}}, 16298 journal = {{Physics World}}, 16299 volume = {{16}}, 16300 author = {Marko, John F. and Cocco, Simona} 16301 } 16302 @article{Qian2000a, 16303 number = {{4}}, 16304 year = {2000}, 16305 title = {{A mathematical analysis for the Brownian dynamics of a DNA tether}}, 16306 pages = {{331-340}}, 16307 journal = {{Journal of Mathematical Biology}}, 16308 volume = {{41}}, 16309 author = {Qian, Hong} 16310 } 16311 @misc{Marko2005, 16312 month = {June 2, 2005}, 16313 year = {2005}, 16314 title = {{Introduction to Single-DNA Micromechanics}}, 16315 pages = {63}, 16316 publisher = {{Department of Physics, University of Illinois at Chicago}}, 16317 author = {Marko, J.F.} 16318 } 16319 @article{Schaefer1980, 16320 number = {{5}}, 16321 year = {1980}, 16322 title = {{Dynamics of Semiflexible Polymers in Solution}}, 16323 pages = {{1280-1289}}, 16324 journal = {{Macromolecules}}, 16325 volume = {{13}}, 16326 author = {Schaefer, D.W. and Joanny, J.F. and Pincus, P.} 16327 } 16328 @article{Zurla2006, 16329 year = {2006}, 16330 title = {{Novel tethered particle motion analysis of CI protein-mediated DNA looping in the regulation of bacteriophage lambda}}, 16331 pages = {{S225-S234}}, 16332 journal = {{Journal of Physics: Condensed Matter}}, 16333 volume = {{18}}, 16334 author = {Zurla, C. and Franzini, A. and Galli, G. and Dunlap, D. 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